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tests/OVERFLOW/EXPREF/namelist_sco_FCT2_flux_ubs_cfg
View file @ 672ff863
......@@ -183,6 +183,9 @@
!-----------------------------------------------------------------------
&namzdf ! vertical physics (default: NO selection)
!-----------------------------------------------------------------------
! ! adaptive-implicit vertical advection
ln_zad_Aimp = .true. ! Courant number dependent scheme (Shchepetkin 2015)
!
! ! type of vertical closure (required)
ln_zdfcst = .true. ! constant mixing
ln_zdfric = .false. ! local Richardson dependent formulation (T => fill namzdf_ric)
......
tests/OVERFLOW/EXPREF/namelist_sco_FCT4_flux_cen-ahm1000_cfg
View file @ 672ff863
......@@ -183,6 +183,9 @@
!-----------------------------------------------------------------------
&namzdf ! vertical physics (default: NO selection)
!-----------------------------------------------------------------------
! ! adaptive-implicit vertical advection
ln_zad_Aimp = .true. ! Courant number dependent scheme (Shchepetkin 2015)
!
! ! type of vertical closure (required)
ln_zdfcst = .true. ! constant mixing
ln_zdfric = .false. ! local Richardson dependent formulation (T => fill namzdf_ric)
......
tests/OVERFLOW/EXPREF/namelist_sco_FCT4_flux_ubs_cfg
View file @ 672ff863
......@@ -183,6 +183,9 @@
!-----------------------------------------------------------------------
&namzdf ! vertical physics (default: NO selection)
!-----------------------------------------------------------------------
! ! adaptive-implicit vertical advection
ln_zad_Aimp = .true. ! Courant number dependent scheme (Shchepetkin 2015)
!
! ! type of vertical closure (required)
ln_zdfcst = .true. ! constant mixing
ln_zdfric = .false. ! local Richardson dependent formulation (T => fill namzdf_ric)
......
tests/OVERFLOW/EXPREF/namelist_zps_FCT2_flux_ubs_cfg
View file @ 672ff863
......@@ -183,6 +183,9 @@
!-----------------------------------------------------------------------
&namzdf ! vertical physics (default: NO selection)
!-----------------------------------------------------------------------
! ! adaptive-implicit vertical advection
ln_zad_Aimp = .true. ! Courant number dependent scheme (Shchepetkin 2015)
!
! ! type of vertical closure (required)
ln_zdfcst = .true. ! constant mixing
ln_zdfric = .false. ! local Richardson dependent formulation (T => fill namzdf_ric)
......
tests/OVERFLOW/EXPREF/namelist_zps_FCT4_vect_een_cfg
View file @ 672ff863
......@@ -183,6 +183,9 @@
!-----------------------------------------------------------------------
&namzdf ! vertical physics (default: NO selection)
!-----------------------------------------------------------------------
! ! adaptive-implicit vertical advection
ln_zad_Aimp = .true. ! Courant number dependent scheme (Shchepetkin 2015)
!
! ! type of vertical closure (required)
ln_zdfcst = .true. ! constant mixing
ln_zdfric = .false. ! local Richardson dependent formulation (T => fill namzdf_ric)
......
tests/OVERFLOW/MY_SRC/usrdef_zgr.F90
View file @ 672ff863
......@@ -92,16 +92,7 @@ CONTAINS
DO_2D( 0, 0, 0, 0 )
zhu(ji,jj) = 0.5_wp * ( zht(ji,jj) + zht(ji+1,jj) )
END_2D
CALL lbc_lnk( 'usrdef_zgr', zhu, 'U', 1. ) ! boundary condition: this mask the surrouding grid-points
! ! ==>>> set by hand non-zero value on first/last columns & rows
DO ji = mi0(1), mi1(1) ! first row of global domain only
zhu(ji,2) = zht(ji,2)
END DO
DO ji = mi0(jpiglo), mi1(jpiglo) ! last row of global domain only
zhu(ji,2) = zht(ji,2)
END DO
zhu(:,1) = zhu(:,2)
zhu(:,3) = zhu(:,2)
CALL lbc_lnk( 'usrdef_zgr', zhu, 'U', 1._wp ) ! boundary condition: this mask the surrouding grid-points
!
CALL zgr_z1d( pdept_1d, pdepw_1d, pe3t_1d , pe3w_1d ) ! Reference z-coordinate system
!
......@@ -111,7 +102,7 @@ CONTAINS
! no ocean cavities : top ocean level is ONE, except over land
! the ocean basin surrounded by land (1+nn_hls grid-points) set through lbc_lnk call
z2d(:,:) = 1._wp ! surface ocean is the 1st level
CALL lbc_lnk( 'usrdef_zgr', z2d, 'T', 1. ) ! closed basin, see userdef_nam.F90
CALL lbc_lnk( 'usrdef_zgr', z2d, 'T', 1._wp ) ! closed basin, see userdef_nam.F90
k_top(:,:) = NINT( z2d(:,:) )
!
!
......
tests/SWG/MY_SRC/usrdef_sbc.F90
View file @ 672ff863
......@@ -101,7 +101,7 @@ CONTAINS
taum(ji,jj) = zmod
wndm(ji,jj) = SQRT( zmod * zcoef )
END_2D
CALL lbc_lnk( 'usrdef_sbc', taum(:,:), 'T', 1. , wndm(:,:), 'T', 1. )
CALL lbc_lnk( 'usrdef_sbc', taum(:,:), 'T', 1._wp , wndm(:,:), 'T', 1._wp )
!
END SUBROUTINE usrdef_sbc_oce
......
tests/SWG/MY_SRC/usrdef_zgr.F90
View file @ 672ff863
......@@ -191,7 +191,7 @@ CONTAINS
!
z2d(:,:) = REAL( jpkm1 , wp ) ! flat bottom
!
CALL lbc_lnk( 'usrdef_zgr', z2d, 'T', 1. ) ! set surrounding land to zero (closed boundaries)
CALL lbc_lnk( 'usrdef_zgr', z2d, 'T', 1._wp ) ! set surrounding land to zero (closed boundaries)
!
zylim0 = 10000._wp ! +10km
zylim1 = 2010000._wp ! 2010km
......
tests/TSUNAMI/MY_SRC/usrdef_istate.F90
View file @ 672ff863
......@@ -103,7 +103,7 @@ CONTAINS
END_2D
!
CALL lbc_lnk('usrdef_istate', pssh, 'T', 1. ) ! apply boundary conditions
CALL lbc_lnk('usrdef_istate', pssh, 'T', 1._wp ) ! apply boundary conditions
!
END SUBROUTINE usr_def_istate_ssh
......
tests/VORTEX/MY_SRC/usrdef_istate.F90
View file @ 672ff863
......@@ -122,7 +122,7 @@ CONTAINS
END DO
END_2D
!
CALL lbc_lnk( 'usrdef_istate', pu, 'U', -1., pv, 'V', -1. )
CALL lbc_lnk( 'usrdef_istate', pu, 'U', -1._wp, pv, 'V', -1._wp )
!
END SUBROUTINE usr_def_istate
......
tests/VORTEX/MY_SRC/usrdef_zgr.F90
View file @ 672ff863
......@@ -189,7 +189,7 @@ CONTAINS
!
z2d(:,:) = REAL( jpkm1 , wp ) ! flat bottom
!
CALL lbc_lnk( 'usrdef_zgr', z2d, 'T', 1. ) ! set surrounding land to zero (closed boundaries)
CALL lbc_lnk( 'usrdef_zgr', z2d, 'T', 1._wp ) ! set surrounding land to zero (closed boundaries)
!
k_bot(:,:) = NINT( z2d(:,:) ) ! =jpkm1 over the ocean point, =0 elsewhere
!
......
tests/WAD/EXPREF/namelist_cfg
View file @ 672ff863
......@@ -58,7 +58,6 @@
!-----------------------------------------------------------------------
&namwad ! Wetting and Drying (WaD) (default: OFF)
!-----------------------------------------------------------------------
ln_wd_il = .false ! T/F activation of iterative limiter
ln_wd_dl = .true. ! T/F activation of directional limiter
ln_wd_dl_bc = .true. ! T/F Directional limiteer Baroclinic option
ln_wd_dl_rmp = .true. ! T/F Turn on directional limiter ramp
......@@ -66,7 +65,6 @@
rn_wdmin1 = 0.2 ! Minimum wet depth on dried cells
rn_wdmin2 = 0.0001 ! Tolerance of min wet depth on dried cells
rn_wdld = 2.5 ! Land elevation below which WaD is allowed
nn_wdit = 20 ! Max iterations for WaD limiter
/
!!======================================================================
!! *** Surface Boundary Condition namelists *** !!
......@@ -156,10 +154,7 @@
cn_ice = 'none' !
nn_ice_dta = 0 ! = 0, bdy data are equal to the initial state
! = 1, bdy data are read in 'bdydata .nc' files
rn_ice_tem = 270. ! si3 only: arbitrary temperature of incoming sea ice
rn_ice_sal = 10. ! si3 only: -- salinity --
rn_ice_age = 30. ! si3 only: -- age --
!
ln_tra_dmp =.false. ! open boudaries conditions for tracers
ln_dyn3d_dmp =.false. ! open boundary condition for baroclinic velocities
rn_time_dmp = 1. ! Damping time scale in days
......
tests/WAD/MY_DOCS/Namelists/nam_wad
View file @ 672ff863
!-----------------------------------------------------------------------
&namwad ! Wetting and drying
!-----------------------------------------------------------------------
ln_wd_il = .false ! T/F activation of iterative limiter for wetting and drying scheme
ln_wd_dl = .true. ! T/F activation of directional llimiter for wetting drying scheme
ln_wd_dl_bc = .true. ! T/F Directional limiteer Baroclinic option
ln_wd_dl_rmp = .true. ! T/F Turn on directional limiter ramp
......@@ -9,7 +8,6 @@
rn_wdmin1 = 0.2 ! Minimum wet depth on dried cells
rn_wdmin2 = 0.0001 ! Tolerance of min wet depth on dried cells
rn_wdld = 2.5 ! Land elevation below which wetting/drying is allowed
nn_wdit = 20 ! Max iterations for W/D limiter
rn_wd_sbcdep = 5.0 ! Depth at which to taper sbc fluxes
rn_wd_sbcfra = 0.999 ! Fraction of SBC fluxes at taper depth (Must be <1)
/
tests/WAD/MY_SRC/usrdef_istate.F90
View file @ 672ff863
......@@ -44,7 +44,7 @@ CONTAINS
!! ** Purpose : Initialization of the dynamics and tracers
!! Here WAD_TEST_CASES configuration
!!
q !! ** Method : - set temprature field
!! ** Method : - set temprature field
!! - set salinity field
!!----------------------------------------------------------------------
REAL(wp), DIMENSION(jpi,jpj,jpk) , INTENT(in ) :: pdept ! depth of t-point [m]
......
tests/WAD/MY_SRC/usrdef_zgr.F90
View file @ 672ff863
......@@ -232,7 +232,7 @@ CONTAINS
DO_2D( 0, 0, 0, 0 )
zhu(ji,jj) = 0.5_wp * ( zht(ji,jj) + zht(ji+1,jj) )
END_2D
CALL lbc_lnk( 'usrdef_zgr', zhu, 'U', 1. ) ! boundary condition: this mask the surrounding grid-points
CALL lbc_lnk( 'usrdef_zgr', zhu, 'U', 1._wp ) ! boundary condition: this mask the surrounding grid-points
! ! ==>>> set by hand non-zero value on first/last columns & rows
DO ji = mi0(1), mi1(1) ! first row of global domain only
zhu(ji,:) = zht(1,:)
......@@ -245,7 +245,7 @@ CONTAINS
DO_2D( 0, 0, 0, 0 )
zhv(ji,jj) = 0.5_wp * ( zht(ji,jj) + zht(ji,jj+1) )
END_2D
CALL lbc_lnk( 'usrdef_zgr', zhv, 'V', 1. ) ! boundary condition: this mask the surrounding grid-points
CALL lbc_lnk( 'usrdef_zgr', zhv, 'V', 1._wp ) ! boundary condition: this mask the surrounding grid-points
DO jj = mj0(1), mj1(1) ! first row of global domain only
zhv(:,jj) = zht(:,jj)
END DO
......@@ -266,7 +266,7 @@ CONTAINS
z2d(:,mj0(1):mj1(1)) = 0._wp
z2d(:,mj0(jpjglo):mj1(jpjglo)) = 0._wp
CALL lbc_lnk( 'usrdef_zgr', z2d, 'T', 1. ) ! closed basin, see userdef_nam.F90
CALL lbc_lnk( 'usrdef_zgr', z2d, 'T', 1._wp ) ! closed basin, see userdef_nam.F90
k_top(:,:) = NINT( z2d(:,:) )
!
!
......@@ -301,15 +301,15 @@ CONTAINS
pe3vw(ji,jj,jk) = zwet * z1_jpkm1
END DO
END_2D
CALL lbc_lnk( 'usrdef_zgr', pdept, 'T', 1. )
CALL lbc_lnk( 'usrdef_zgr', pdepw, 'T', 1. )
CALL lbc_lnk( 'usrdef_zgr', pe3t , 'T', 1. )
CALL lbc_lnk( 'usrdef_zgr', pe3w , 'T', 1. )
CALL lbc_lnk( 'usrdef_zgr', pe3u , 'U', 1. )
CALL lbc_lnk( 'usrdef_zgr', pe3uw, 'U', 1. )
CALL lbc_lnk( 'usrdef_zgr', pe3f , 'F', 1. )
CALL lbc_lnk( 'usrdef_zgr', pe3v , 'V', 1. )
CALL lbc_lnk( 'usrdef_zgr', pe3vw, 'V', 1. )
CALL lbc_lnk( 'usrdef_zgr', pdept, 'T', 1._wp )
CALL lbc_lnk( 'usrdef_zgr', pdepw, 'T', 1._wp )
CALL lbc_lnk( 'usrdef_zgr', pe3t , 'T', 1._wp )
CALL lbc_lnk( 'usrdef_zgr', pe3w , 'T', 1._wp )
CALL lbc_lnk( 'usrdef_zgr', pe3u , 'U', 1._wp )
CALL lbc_lnk( 'usrdef_zgr', pe3uw, 'U', 1._wp )
CALL lbc_lnk( 'usrdef_zgr', pe3f , 'F', 1._wp )
CALL lbc_lnk( 'usrdef_zgr', pe3v , 'V', 1._wp )
CALL lbc_lnk( 'usrdef_zgr', pe3vw, 'V', 1._wp )
WHERE( pe3t (:,:,:) == 0._wp ) pe3t (:,:,:) = 1._wp
WHERE( pe3u (:,:,:) == 0._wp ) pe3u (:,:,:) = 1._wp
WHERE( pe3v (:,:,:) == 0._wp ) pe3v (:,:,:) = 1._wp
......
tools/DOMAINcfg/src/agrif_user.F90
View file @ 672ff863
......@@ -748,7 +748,7 @@
EXTERNAL :: init_e2t, init_e2u, init_e2v, init_e2f
ln_perio=.FALSE.
if( jperio ==1 .OR. jperio==2 .OR. jperio==4) ln_perio=.TRUE.
IF( jperio == 1 .OR. jperio == 2 .OR. jperio == 4 .OR. jperio == 6 ) ln_perio=.TRUE.
CALL Agrif_Init_variable(e1t_id, procname = init_e1t)
CALL Agrif_Init_variable(e1u_id, procname = init_e1u)
......@@ -1216,8 +1216,8 @@
CALL ctl_stop( 'STOP', 'AGRIF zoom imin must be < imax' )
ENDIF
IF ( (Agrif_Parent(jperio)==4).OR.(Agrif_Parent(jperio)==1) ) THEN
IF ( (jperio==4).OR.(jperio==1) ) THEN ! Cyclic east-west zoom
IF ( Agrif_Parent(jperio) == 1 .OR. Agrif_Parent(jperio) == 4 .OR. Agrif_Parent(jperio) == 6 ) THEN
IF ( jperio == 1 .OR. jperio == 4 .OR. jperio == 6 ) THEN ! Cyclic east-west zoom
lk_west = .FALSE. ; lk_east = .FALSE.
! Checks:
IF ( imin/=1-Agrif_Parent(nbghostcells_x_w) ) THEN
......@@ -1258,8 +1258,8 @@
CALL ctl_stop( 'STOP', 'AGRIF zoom jmin must be < jmax' )
ENDIF
IF ( Agrif_Parent(jperio)==4 ) THEN
IF (jperio==4) THEN ! North-Fold
IF ( Agrif_Parent(jperio) == 4 .OR. Agrif_Parent(jperio) == 6 ) THEN
IF ( jperio == 4 .OR. jperio == 6 ) THEN ! North-Fold
lk_north = .FALSE.
! Checks:
IF ( jmax/=Agrif_Parent(Nj0glo)+1-Agrif_Parent(nbghostcells_y_s)) THEN
......@@ -1300,10 +1300,10 @@
IF (.NOT.lk_south) nbghostcells_y_s = 1
IF (.NOT.lk_north) nbghostcells_y_n = 1
IF ((jperio == 1).OR.(jperio == 4)) THEN
IF ( jperio == 1 .OR. jperio == 4 .OR. jperio == 6 ) THEN
nbghostcells_x_w = 0 ; nbghostcells_x_e = 0
ENDIF
IF (jperio == 4) THEN
IF ( jperio == 4 .OR. jperio == 6 ) THEN
nbghostcells_y_n = 0
ENDIF
......
tools/MISCELLANEOUS/add_wp_in_call_lbc_lnk.sh 0 → 100755
View file @ 672ff863
#!/bin/bash
#
# this sed makes sure that we alwas specify the _wp in the calls to lbc_lnk
#
for ff in $( find src -type f ) */*/MY_SRC/* # for all nemo files
do
# look for something like ", 'X', 1. )" and replace it by ", 'X', 1.wp )"
# - X can be TUVFW
# - the "1" can be followed by a "." or not. It must be followed by "," or ")" or "&"
# - any number of blanks is acceptable.
sed -e "s/\(, *'[TUVFW]' *, *-*1\)\.*\( *[,)&]\)/\1._wp\2/g" $ff > tmp
mv tmp $ff
done
tools/NESTING/src/agrif_create_bathy.f90
View file @ 672ff863
......@@ -123,18 +123,20 @@ PROGRAM create_bathy
! check grids: if identical then do not interpolate
identical_grids = .FALSE.
IF( SIZE(G0%nav_lat,1) == SIZE(G1%nav_lat,1) .AND. SIZE(G0%nav_lat,2) == SIZE(G1%nav_lat,2) .AND. &
& SIZE(G0%nav_lon,1) == SIZE(G1%nav_lon,1) .AND. SIZE(G0%nav_lon,2) == SIZE(G1%nav_lon,2) ) THEN
IF( MAXVAL( ABS(G0%nav_lat(:,:)- G1%nav_lat(:,:)) ) < 0.0001 .AND. &
& MAXVAL( ABS(G0%nav_lon(:,:)- G1%nav_lon(:,:)) ) < 0.0001 ) THEN
WRITE(*,*) ''
WRITE(*,*) 'same grid between parent and child domains => NO INTERPOLATION'
WRITE(*,*) ''
G1%bathy_meter = G0%bathy_meter
identical_grids = .TRUE.
ENDIF
ENDIF
!clem: comment these lines if one wants to create a zoom 1:1 and to change the bathymetry in the zoom
!
! IF( SIZE(G0%nav_lat,1) == SIZE(G1%nav_lat,1) .AND. SIZE(G0%nav_lat,2) == SIZE(G1%nav_lat,2) .AND. &
! & SIZE(G0%nav_lon,1) == SIZE(G1%nav_lon,1) .AND. SIZE(G0%nav_lon,2) == SIZE(G1%nav_lon,2) ) THEN
! IF( MAXVAL( ABS(G0%nav_lat(:,:)- G1%nav_lat(:,:)) ) < 0.0001 .AND. &
! & MAXVAL( ABS(G0%nav_lon(:,:)- G1%nav_lon(:,:)) ) < 0.0001 ) THEN
! WRITE(*,*) ''
! WRITE(*,*) 'same grid between parent and child domains => NO INTERPOLATION'
! WRITE(*,*) ''
! G1%bathy_meter = G0%bathy_meter
! identical_grids = .TRUE.
! ENDIF
! ENDIF
IF( .NOT.new_topo ) type_bathy_interp = 2 ! only one which works
!
......@@ -270,8 +272,8 @@ PROGRAM create_bathy
ALLOCATE(masksrc(SIZE(G0%bathy_meter,1),SIZE(G0%bathy_meter,2)))
ALLOCATE(bathy_test(nxfin,nyfin))
!
WHERE(G0%bathy_meter.LE.0) ; masksrc = .FALSE. ;
ELSEWHERE ; masksrc = .TRUE. ;
WHERE(G0%bathy_meter.LE.0.) ; masksrc = .FALSE. ;
ELSEWHERE ; masksrc = .TRUE. ;
END WHERE
!
! compute remapping matrix thanks to SCRIP package
......
tools/NESTING/src/agrif_create_restart.f90
View file @ 672ff863
......@@ -99,7 +99,7 @@ PROGRAM create_rstrt
! create this file
!
CALL set_child_name(restart_file,Child_file)
status = nf90_create(Child_file,NF90_WRITE,ncid)
status = nf90_create(Child_file,NF90_NETCDF4,ncid)
status = nf90_close(ncid)
WRITE(*,*) 'Child grid restart file name = ',TRIM(Child_file)
WRITE(*,*) ''
......
tools/NESTING/src/agrif_interpolation.f90
View file @ 672ff863
......@@ -210,21 +210,21 @@ CONTAINS
SELECT CASE(typevar)
CASE('T')
IF(MOD(irafx,2)==1) THEN ! odd
zx = 1 ; zy = 1 ; jdecx = FLOOR(irafx/2.) ; jdecy = FLOOR(irafy/2.)
zx = 1 ; zy = 1 ; jdecx = FLOOR(REAL(irafx)/2.) ; jdecy = FLOOR(REAL(irafy)/2.)
ELSE ! even
zx = 2 ; zy = 2 ; jdecx = FLOOR(irafx/2.) ; jdecy = FLOOR(irafy/2.)
zx = 2 ; zy = 2 ; jdecx = FLOOR(REAL(irafx)/2.) ; jdecy = FLOOR(REAL(irafy)/2.)
ENDIF
CASE('U')
IF(MOD(irafx,2)==1) THEN ! odd
zx = 1 ; zy = 1 ; jdecx = irafx - 1 ; jdecy = FLOOR(irafy/2.)
zx = 1 ; zy = 1 ; jdecx = irafx - 1 ; jdecy = FLOOR(REAL(irafy)/2.)
ELSE ! even
zx = 1 ; zy = 2 ; jdecx = irafx - 1 ; jdecy = FLOOR(irafy/2.)
zx = 1 ; zy = 2 ; jdecx = irafx - 1 ; jdecy = FLOOR(REAL(irafy)/2.)
ENDIF
CASE('V')
IF(MOD(irafx,2)==1) THEN ! odd
zx = 1 ; zy = 1 ; jdecx = FLOOR(irafx/2.) ; jdecy = irafy - 1
zx = 1 ; zy = 1 ; jdecx = FLOOR(REAL(irafx)/2.) ; jdecy = irafy - 1
ELSE ! even
zx = 2 ; zy = 1 ; jdecx = FLOOR(irafx/2.) ; jdecy = irafy - 1
zx = 2 ; zy = 1 ; jdecx = FLOOR(REAL(irafx)/2.) ; jdecy = irafy - 1
ENDIF
CASE('F')
IF(MOD(irafx,2)==1) THEN ! odd
......@@ -238,21 +238,24 @@ CONTAINS
DO jj = 1, nyf
jjf = jj - jdecy
jjc = j_min + FLOOR((jjf-1.) / irafy)
jjc = j_min + FLOOR(REAL(jjf-1) / REAL(irafy))
DO ji = 1, nxf
jif = ji - jdecx
jic = i_min + FLOOR((jif-1.) / irafx)
Bx = MOD( zx*jif-1, zx*irafx ) / REAL(zx*irafx)
By = MOD( zy*jjf-1, zy*irafy ) / REAL(zy*irafy)
jic = i_min + FLOOR(REAL(jif-1) / REAL(irafx))
Bx = REAL(MODULO( zx*jif-1, zx*irafx )) / REAL(zx*irafx)
By = REAL(MODULO( zy*jjf-1, zy*irafy )) / REAL(zy*irafy)
Ax = 1. - Bx
Ay = 1. - By
jic1 = MIN( nxc, jic+1 ) ! avoid out of bounds for tabin below
jjc1 = MIN( nyc, jjc+1 ) ! --
jic = MAX( 1, jic ) ! avoid out of bounds
jjc = MAX( 1, jjc ) ! avoid out of bounds
tabout(ji,jj) = ( Bx * tabin(jic1,jjc ) + Ax * tabin(jic,jjc ) ) * Ay + &
& ( Bx * tabin(jic1,jjc1) + Ax * tabin(jic,jjc1) ) * By
END DO
......@@ -503,7 +506,7 @@ CONTAINS
REAL*8, POINTER, DIMENSION(:,:) :: lonParent,latParent => NULL()
REAL*8, POINTER, DIMENSION(:,:) :: lonChild,latChild,latlon_temp => NULL()
REAL*8, POINTER, DIMENSION(:,:,:,:) :: tabinterp4d,tabvar1,tabvar2,tabvar3 => NULL()
REAL*8, POINTER, DIMENSION(:,:,:) :: tabinterp3d,tabvar3d => NULL()
REAL*8, POINTER, DIMENSION(:,:,:) :: tabinterp3d,tabvar3d,tabvar01,tabvar02,tabvar03 => NULL()
REAL*8, POINTER, DIMENSION(:) :: timedepth_temp,depth => NULL()
REAL*8,DIMENSION(:,:),POINTER :: matrix => NULL()
INTEGER,DIMENSION(:),POINTER :: src_add,dst_add => NULL()
......@@ -515,11 +518,17 @@ CONTAINS
LOGICAL,DIMENSION(:,:),POINTER :: masksrc => NULL()
LOGICAL :: Interpolation,conservation,Pacifique,Extrapolation,land_level
!
INTEGER :: deptht,time,i,status,ncid,t,ii,j,nb,numlon,numlat
INTEGER :: deptht,time,i,status,ncid,t,ii,j,nb,numlon,numlat,unlimdimid
!
TYPE(Coordinates) :: G0,G1
!
status = nf90_open(TRIM(filename),NF90_NOWRITE,ncid)
IF (status/=nf90_noerr) THEN
WRITE(*,*)"unable to open netcdf file : ",TRIM(filename)
STOP
ENDIF
!
!*****************
!If coarse grid is masked possibility to activate an extrapolation process
!
......@@ -541,7 +550,6 @@ CONTAINS
!
CALL Read_Ncdf_dim('x',filename,numlon)
CALL Read_Ncdf_dim('y',filename,numlat)
CALL Read_Ncdf_dim('time_counter',filename,time)
IF ( Dims_Existence( 'deptht' , filename ) ) THEN
CALL Read_Ncdf_dim('deptht',filename,deptht)
ELSE IF ( Dims_Existence( 'depthu' , filename ) ) THEN
......@@ -555,7 +563,28 @@ CONTAINS
ELSE
deptht = N
ENDIF
IF ( Dims_Existence( 'time_counter' , filename ) ) THEN
CALL Read_Ncdf_dim('time_counter',filename,time)
! check that time_counter is the unlimited dim
status = nf90_inquire(ncid, unlimiteddimid = unlimdimid)
IF ( unlimdimid == -1 ) THEN
WRITE(*,*)"time_counter should be the unlimited dimension in this file : ",filename
WRITE(*,*)" use nco command: ncks -O --mk_rec_dmn time_counter ",filename," ",filename
STOP
ENDIF
ELSEIF( Dims_Existence( 'time' , filename ) ) THEN
CALL Read_Ncdf_dim('time',filename,time)
! check that time is the unlimited dim
status = nf90_inquire(ncid, unlimiteddimid = unlimdimid)
IF ( unlimdimid == -1 ) THEN
WRITE(*,*)"time should be the unlimited dimension in this file : ",filename
WRITE(*,*)" use nco command: ncks -O --mk_rec_dmn time ",filename," ",filename
STOP
ENDIF
ELSE
time = 0
ENDIF
!
! retrieve netcdf variable name
!
......@@ -579,7 +608,7 @@ CONTAINS
status = Read_Coordinates(Childcoordinates,G1,Pacifique)
!
! check consistency of informations read in namelist
!
!
IF( imax > SIZE(G0%glamt,1) .OR. jmax > SIZE(G0%glamt,2) .OR. &
imax <= imin .OR. jmax <= jmin ) THEN
WRITE(*,*) 'ERROR ***** bad child grid definition ...'
......@@ -597,7 +626,6 @@ CONTAINS
STOP
ENDIF
!
!
! Initialization of T-mask thanks to bathymetry
!
......@@ -610,7 +638,6 @@ CONTAINS
CALL Init_mask(parent_bathy_level,G0,1,1)
!
ENDIF
!
! select coordinates to use according to variable position
!
......@@ -619,23 +646,67 @@ CONTAINS
SELECT CASE(posvar)
CASE('T')
lonParent = G0%glamt
latParent = G0%gphit
lonChild = G1%glamt
latChild = G1%gphit
mask = G1%tmask
IF ( Vars_Existence( 'glamt' , parent_coordinate_file ) ) THEN
lonParent = G0%glamt
latParent = G0%gphit
ELSEIF( Vars_Existence( 'nav_lon' , parent_coordinate_file ) ) THEN
lonParent = G0%nav_lon
latParent = G0%nav_lat
ENDIF
IF ( Vars_Existence( 'glamt' , Childcoordinates ) ) THEN
lonChild = G1%glamt
latChild = G1%gphit
ELSEIF( Vars_Existence( 'nav_lon' , Childcoordinates ) ) THEN
lonChild = G1%nav_lon
latChild = G1%nav_lat
ENDIF
!!IF ( Vars_Existence( 'tmask' , Childcoordinates ) ) THEN
mask = G1%tmask
!!ELSEIF( Vars_Existence( 'top_level' , Childcoordinates ) ) THEN
!! mask = MAX( 1., G1%top_level )
!!ELSE
!! mask = 1.
!!ENDIF
CASE('U')
lonParent = G0%glamu
latParent = G0%gphiu
lonChild = G1%glamu
latChild = G1%gphiu
mask = G1%umask
IF ( Vars_Existence( 'glamu' , parent_coordinate_file ) ) THEN
lonParent = G0%glamu
latParent = G0%gphiu
ELSE
WRITE(*,*) 'ERROR ***** missing glamu/gphiu coordinates in ', TRIM(parent_coordinate_file)
STOP
ENDIF
IF ( Vars_Existence( 'glamu' , Childcoordinates ) ) THEN
lonChild = G1%glamu
latChild = G1%gphiu
ELSE
WRITE(*,*) 'ERROR ***** missing glamu/gphiu coordinates in ', TRIM(Childcoordinates)
STOP
ENDIF
!!IF ( Vars_Existence( 'umask' , Childcoordinates ) ) THEN
mask = G1%umask
!!ELSE
!! mask = 1.
!!ENDIF
CASE('V')
lonParent = G0%glamv
latParent = G0%gphiv
lonChild = G1%glamv
latChild = G1%gphiv
mask = G1%vmask
IF ( Vars_Existence( 'glamv' , parent_coordinate_file ) ) THEN
lonParent = G0%glamv
latParent = G0%gphiv
ELSE
WRITE(*,*) 'ERROR ***** missing glamv/gphiv coordinates in ', TRIM(parent_coordinate_file)
STOP
ENDIF
IF ( Vars_Existence( 'glamv' , Childcoordinates ) ) THEN
lonChild = G1%glamv
latChild = G1%gphiv
ELSE
WRITE(*,*) 'ERROR ***** missing glamv/gphiv coordinates in ', TRIM(Childcoordinates)
STOP
ENDIF
!!IF ( Vars_Existence( 'vmask' , Childcoordinates ) ) THEN
mask = G1%vmask
!!ELSE
!! mask = 1.
!!ENDIF
END SELECT
DEALLOCATE(G0%glamu,G0%glamv,G0%gphiu,G0%gphiv)
......@@ -665,8 +736,9 @@ CONTAINS
IF ( Dims_Existence( 'depthu' , filename ) ) CALL Write_Ncdf_dim('depthu',Child_file,deptht)
IF ( Dims_Existence( 'depthv' , filename ) ) CALL Write_Ncdf_dim('depthv',Child_file,deptht)
IF ( Dims_Existence( 'depthw' , filename ) ) CALL Write_Ncdf_dim('depthw',Child_file,deptht)
IF ( Dims_Existence( 'z' , filename ) ) CALL Write_Ncdf_dim('z',Child_file,deptht)
CALL Write_Ncdf_dim('time_counter',Child_file,0)
IF ( Dims_Existence( 'z' , filename ) ) CALL Write_Ncdf_dim('z' ,Child_file,deptht)
IF ( Dims_Existence( 'time_counter' , filename ) ) CALL Write_Ncdf_dim('time_counter',Child_file,time)
IF ( Dims_Existence( 'time' , filename ) ) CALL Write_Ncdf_dim('time' ,Child_file,time)
IF( deptht .NE. 1 .AND. deptht .NE. N ) THEN
WRITE(*,*) '***'
......@@ -733,6 +805,17 @@ CONTAINS
varname = TRIM(Ncdf_varname(i))
Interpolation = .FALSE.
!
!copy time from input file to output file
CASE('time')
ALLOCATE(timedepth_temp(time))
CALL Read_Ncdf_var('time',filename,timedepth_temp)
CALL Write_Ncdf_var('time','time', &
Child_file,timedepth_temp,'float')
CALL Copy_Ncdf_att('time',TRIM(filename),Child_file)
DEALLOCATE(timedepth_temp)
varname = TRIM(Ncdf_varname(i))
Interpolation = .FALSE.
!
!copy deptht from input file to output file
CASE('deptht')
ALLOCATE(depth(deptht))
......@@ -806,84 +889,305 @@ CONTAINS
!
END SELECT
! //////////////// INTERPOLATION FOR 3D VARIABLES /////////////////////////////////////
! //////////////// INTERPOLATION FOR 2D VARIABLES /////////////////////////////////////
!
IF( Interpolation .AND. Get_NbDims(TRIM(varname),TRIM(filename)) == 3 ) THEN
IF( Interpolation .AND. Get_NbDims(TRIM(varname),TRIM(filename)) == 2 ) THEN
!
ALLOCATE(detected_pts(numlon,numlat,N))
ALLOCATE(masksrc(numlon,numlat))
!
! ******************************LOOP ON TIME*******************************************
!loop on time
DO t = 1,time
!
IF(extrapolation) THEN
WRITE(*,*) 'interpolation/extrapolation ',TRIM(varname),' for time t = ',t
ELSE
WRITE(*,*) 'interpolation ',TRIM(varname),' for time t = ',t
ENDIF
!
ALLOCATE(tabvar3d(numlon,numlat,1))
ALLOCATE(tabinterp3d(nxfin,nyfin,1))
!
CALL Read_Ncdf_var(varname,filename,tabvar3d,t)
IF(extrapolation) THEN
WRITE(*,*) 'interpolation/extrapolation ',TRIM(varname)
ELSE
WRITE(*,*) 'interpolation ',TRIM(varname)
ENDIF
!
ALLOCATE(tabvar3d(numlon,numlat,1))
ALLOCATE(tabinterp3d(nxfin,nyfin,1))
!
CALL Read_Ncdf_var(varname,filename,tabvar3d)
!
! search points where extrapolation is required
!
IF(Extrapolation) THEN
WHERE( tabvar3d .GE. 1.e+20 ) tabvar3d = 0.
CALL extrap_detect(G0,G1,detected_pts(:,:,1),1)
CALL correct_field_2d(detected_pts(:,:,1),tabvar3d,G0,masksrc,'posvar')
ELSE
masksrc = .TRUE.
ENDIF
SELECT CASE(TRIM(interp_type))
CASE('bilinear')
CALL get_remap_matrix(latParent,latChild, &
lonParent,lonChild, &
masksrc,matrix,src_add,dst_add)
CASE('bicubic')
CALL get_remap_bicub(latParent,latChild, &
lonParent,lonChild, &
masksrc,matrix,src_add,dst_add)
END SELECT
!
!
SELECT CASE(TRIM(interp_type))
CASE('bilinear')
CALL make_remap(tabvar3d(:,:,1),tabinterp3d(:,:,1),nxfin,nyfin, &
matrix,src_add,dst_add)
CASE('bicubic')
CALL make_bicubic_remap(tabvar3d(:,:,1),masksrc,tabinterp3d(:,:,1),nxfin,nyfin, &
matrix,src_add,dst_add)
END SELECT
!
IF( conservation ) CALL Correctforconservation(tabvar3d(:,:,1),tabinterp3d(:,:,1), &
G0%e1t,G0%e2t,G1%e1t,G1%e2t,nxfin,nyfin,posvar,imin,jmin)
!
IF(Extrapolation) tabinterp3d(:,:,1) = tabinterp3d(:,:,1) * mask(:,:,1)
!! tabinterp3d(:,:,1) = tabinterp3d(:,:,1) * mask(:,:,1)
!
dimnames(1)='x'
dimnames(2)='y'
!
CALL Write_Ncdf_var(TRIM(varname),dimnames(1:2),&
Child_file,tabinterp3d(:,:,1),'float')
!
DEALLOCATE(tabinterp3d)
DEALLOCATE(tabvar3d)
!
DEALLOCATE(detected_pts)
IF(ASSOCIATED(matrix)) DEALLOCATE(matrix,dst_add,src_add)
DEALLOCATE( masksrc)
CALL Copy_Ncdf_att(TRIM(varname),TRIM(filename),Child_file)
!
! //////////////// INTERPOLATION FOR 3D VARIABLES /////////////////////////////////////
!
ELSEIF( Interpolation .AND. Get_NbDims(TRIM(varname),TRIM(filename)) == 3 ) THEN
!
IF( DimUnlimited_Var(TRIM(varname),TRIM(filename)) ) THEN
ALLOCATE(detected_pts(numlon,numlat,N))
ALLOCATE(masksrc(numlon,numlat))
!
! search points where extrapolation is required
!
IF(Extrapolation) THEN
WHERE( tabvar3d .GE. 1.e+20 ) tabvar3d = 0.
IF (t .EQ. 1. ) CALL extrap_detect(G0,G1,detected_pts(:,:,1),1)
CALL correct_field_2d(detected_pts(:,:,1),tabvar3d,G0,masksrc,'posvar')
ELSE
masksrc = .TRUE.
ENDIF
! ******************************LOOP ON TIME*******************************************
!loop on time
DO t = 1,time
!
IF(extrapolation) THEN
WRITE(*,*) 'interpolation/extrapolation ',TRIM(varname),' for time t = ',t
ELSE
WRITE(*,*) 'interpolation ',TRIM(varname),' for time t = ',t
ENDIF
!
ALLOCATE(tabvar3d(numlon,numlat,1))
ALLOCATE(tabinterp3d(nxfin,nyfin,1))
!
CALL Read_Ncdf_var(varname,filename,tabvar3d,t)
!
! search points where extrapolation is required
!
IF(Extrapolation) THEN
WHERE( tabvar3d .GE. 1.e+20 ) tabvar3d = 0.
IF (t .EQ. 1. ) CALL extrap_detect(G0,G1,detected_pts(:,:,1),1)
CALL correct_field_2d(detected_pts(:,:,1),tabvar3d,G0,masksrc,'posvar')
ELSE
masksrc = .TRUE.
ENDIF
IF (t.EQ.1 ) THEN
IF (t.EQ.1 ) THEN
SELECT CASE(TRIM(interp_type))
CASE('bilinear')
CALL get_remap_matrix(latParent,latChild, &
lonParent,lonChild, &
masksrc,matrix,src_add,dst_add)
CASE('bicubic')
CALL get_remap_bicub(latParent,latChild, &
lonParent,lonChild, &
masksrc,matrix,src_add,dst_add)
END SELECT
!
ENDIF
!
SELECT CASE(TRIM(interp_type))
CASE('bilinear')
CALL get_remap_matrix(latParent,latChild, &
lonParent,lonChild, &
masksrc,matrix,src_add,dst_add)
CASE('bilinear')
CALL make_remap(tabvar3d(:,:,1),tabinterp3d(:,:,1),nxfin,nyfin, &
matrix,src_add,dst_add)
CASE('bicubic')
CALL make_bicubic_remap(tabvar3d(:,:,1),masksrc,tabinterp3d(:,:,1),nxfin,nyfin, &
matrix,src_add,dst_add)
END SELECT
!
IF( conservation ) CALL Correctforconservation(tabvar3d(:,:,1),tabinterp3d(:,:,1), &
G0%e1t,G0%e2t,G1%e1t,G1%e2t,nxfin,nyfin,posvar,imin,jmin)
!
IF(Extrapolation) tabinterp3d(:,:,1) = tabinterp3d(:,:,1) * mask(:,:,1)
!! tabinterp3d(:,:,1) = tabinterp3d(:,:,1) * mask(:,:,1)
!
dimnames(1)='x'
dimnames(2)='y'
dimnames(3)='time_counter'
!
CALL Write_Ncdf_var(TRIM(varname),dimnames(1:3),&
Child_file,tabinterp3d,t,'float')
!
DEALLOCATE(tabinterp3d)
DEALLOCATE(tabvar3d)
!end loop on time
END DO
!
DEALLOCATE(detected_pts)
IF(ASSOCIATED(matrix)) DEALLOCATE(matrix,dst_add,src_add)
DEALLOCATE( masksrc)
CASE('bicubic')
CALL get_remap_bicub(latParent,latChild, &
lonParent,lonChild, &
masksrc,matrix,src_add,dst_add)
ELSE
END SELECT
!
ENDIF
!
SELECT CASE(TRIM(interp_type))
CASE('bilinear')
CALL make_remap(tabvar3d(:,:,1),tabinterp3d(:,:,1),nxfin,nyfin, &
matrix,src_add,dst_add)
CASE('bicubic')
CALL make_bicubic_remap(tabvar3d(:,:,1),masksrc,tabinterp3d(:,:,1),nxfin,nyfin, &
matrix,src_add,dst_add)
END SELECT
!
IF( conservation ) CALL Correctforconservation(tabvar3d(:,:,1),tabinterp3d(:,:,1), &
G0%e1t,G0%e2t,G1%e1t,G1%e2t,nxfin,nyfin,posvar,imin,jmin)
!
IF(Extrapolation) tabinterp3d(:,:,1) = tabinterp3d(:,:,1) * mask(:,:,1)
!
dimnames(1)='x'
dimnames(2)='y'
dimnames(3)='time_counter'
!
CALL Write_Ncdf_var(TRIM(varname),dimnames(1:3),&
Child_file,tabinterp3d,t,'float')
!
DEALLOCATE(tabinterp3d)
DEALLOCATE(tabvar3d)
!end loop on time
END DO
!
DEALLOCATE(detected_pts)
IF(ASSOCIATED(matrix)) DEALLOCATE(matrix,dst_add,src_add)
DEALLOCATE( masksrc)
IF ( Dims_Existence( 'deptht' , filename ) ) dimnames(3)='deptht'
IF ( Dims_Existence( 'depthu' , filename ) ) dimnames(3)='depthu'
IF ( Dims_Existence( 'depthv' , filename ) ) dimnames(3)='depthv'
IF ( Dims_Existence( 'depthw' , filename ) ) dimnames(3)='depthw'
IF ( Dims_Existence( 'z' , filename ) ) dimnames(3)='z'
!
! loop on vertical levels
!
DO nb = 1,deptht
!
ALLOCATE(masksrc(numlon,numlat))
ALLOCATE(detected_pts(numlon,numlat,N))
!
! point detection et level n
!
land_level = .FALSE.
IF( Extrapolation ) THEN
IF(MAXVAL(mask(:,:,nb))==0.) land_level = .TRUE.
ENDIF
IF ( land_level ) THEN
!
WRITE(*,*) 'only land points on level ',nb
ALLOCATE(tabinterp3d(nxfin,nyfin,1))
tabinterp3d = 0.e0
!
CALL Write_Ncdf_var(TRIM(varname),dimnames, &
Child_file,tabinterp3d,nb,'float')
DEALLOCATE(tabinterp3d)
!
ELSE
!
ALLOCATE(tabvar01(numlon,numlat,1)) ! level k
IF(Extrapolation) ALLOCATE(tabvar02(numlon,numlat,1)) ! level k-1
IF(Extrapolation) ALLOCATE(tabvar03(numlon,numlat,1)) ! level k-2
ALLOCATE(tabinterp3d(nxfin,nyfin,1))
!
IF(Extrapolation) THEN
IF(nb==1) THEN
CALL Read_Ncdf_var(varname,filename,tabvar01,nb)
WHERE( tabvar01 .GE. 1.e+20 ) tabvar01 = 0.
ELSE IF (nb==2) THEN
CALL Read_Ncdf_var(varname,filename,tabvar02,nb-1)
CALL Read_Ncdf_var(varname,filename,tabvar01,nb)
WHERE( tabvar01 .GE. 1.e+20 ) tabvar01 = 0.
WHERE( tabvar02 .GE. 1.e+20 ) tabvar02 = 0.
ELSE
CALL Read_Ncdf_var(varname,filename,tabvar03,nb-2)
CALL Read_Ncdf_var(varname,filename,tabvar02,nb-1)
CALL Read_Ncdf_var(varname,filename,tabvar01,nb)
WHERE( tabvar01 .GE. 1.e+20 ) tabvar01 = 0.
WHERE( tabvar02 .GE. 1.e+20 ) tabvar02 = 0.
WHERE( tabvar03 .GE. 1.e+20 ) tabvar03 = 0.
ENDIF
!
CALL extrap_detect(G0,G1,detected_pts(:,:,nb),nb)
ALLOCATE(tabvar1(numlon,numlat,1,1)) ! level k
ALLOCATE(tabvar2(numlon,numlat,1,1)) ! level k-1
ALLOCATE(tabvar3(numlon,numlat,1,1)) ! level k-2
tabvar1(:,:,1,1) = tabvar01(:,:,1)
tabvar2(:,:,1,1) = tabvar02(:,:,1)
tabvar3(:,:,1,1) = tabvar03(:,:,1)
CALL correct_field(detected_pts(:,:,nb),tabvar1,tabvar2,&
tabvar3,G0,depth,masksrc,nb,'posvar')
tabvar01(:,:,1) = tabvar1(:,:,1,1)
tabvar02(:,:,1) = tabvar2(:,:,1,1)
tabvar03(:,:,1) = tabvar3(:,:,1,1)
DEALLOCATE(tabvar1,tabvar2,tabvar3)
DEALLOCATE(tabvar02,tabvar03)
ELSE
CALL Read_Ncdf_var(varname,filename,tabvar01,nb)
IF(MAXVAL(tabvar01(:,:,1))==0.) land_level = .TRUE.
masksrc = .TRUE.
ENDIF
IF( Extrapolation ) THEN
WRITE(*,*) 'interpolation/extrapolation ',TRIM(varname),' for vertical level = ',nb
ELSE
WRITE(*,*) 'interpolation ',TRIM(varname),' for vertical level = ',nb
ENDIF
!
SELECT CASE(TRIM(interp_type))
CASE('bilinear')
CALL get_remap_matrix(latParent,latChild, &
lonParent,lonChild, &
masksrc,matrix,src_add,dst_add)
CASE('bicubic')
CALL get_remap_bicub(latParent,latChild, &
lonParent,lonChild, &
masksrc,matrix,src_add,dst_add)
!
END SELECT
!
!
SELECT CASE(TRIM(interp_type))
!
CASE('bilinear')
CALL make_remap(tabvar01(:,:,1),tabinterp3d(:,:,1),nxfin,nyfin, &
matrix,src_add,dst_add)
CASE('bicubic')
CALL make_bicubic_remap(tabvar01(:,:,1),masksrc,tabinterp3d(:,:,1),nxfin,nyfin, &
matrix,src_add,dst_add)
END SELECT
!
IF( conservation ) CALL Correctforconservation(tabvar01(:,:,1),tabinterp3d(:,:,1), &
G0%e1t,G0%e2t,G1%e1t,G1%e2t,nxfin,nyfin,posvar,imin,jmin)
!
ALLOCATE(tabinterp4d(nxfin,nyfin,1,1))
tabinterp4d(:,:,1,1) = tabinterp3d(:,:,1)
IF(Extrapolation) CALL check_extrap(G1,tabinterp4d,nb)
tabinterp3d(:,:,1) = tabinterp4d(:,:,1,1)
DEALLOCATE(tabinterp4d)
!
IF(Extrapolation) tabinterp3d(:,:,1) = tabinterp3d(:,:,1) * mask(:,:,nb)
!! tabinterp3d(:,:,1) = tabinterp3d(:,:,1) * mask(:,:,nb)
!
CALL Write_Ncdf_var(TRIM(varname),dimnames, &
Child_file,tabinterp3d,nb,'float')
!
DEALLOCATE(tabinterp3d)
DEALLOCATE(tabvar01)
!
!
ENDIF
!
IF(ASSOCIATED(matrix)) DEALLOCATE(matrix,dst_add,src_add)
DEALLOCATE( masksrc )
DEALLOCATE(detected_pts)
!
! end loop on vertical levels
!
END DO
ENDIF
CALL Copy_Ncdf_att(TRIM(varname),TRIM(filename),Child_file)
!
......