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cfgs/SHARED/namelist_pisces_ref
View file @ dd59ced6
......@@ -13,8 +13,8 @@
&nampismod ! Model used
!-----------------------------------------------------------------------
ln_p2z = .false. ! LOBSTER model used
ln_p4z = .true. ! PISCES model used
ln_p5z = .false. ! PISCES QUOTA model used
ln_p4z = .true. ! PISCES model used
ln_p5z = .false. ! PISCES QUOTA model used
ln_ligand = .false. ! Enable organic ligands
ln_sediment = .false. ! Enable sediment module
/
......@@ -56,8 +56,21 @@
ldocz = 1.E-4 ! Zoo ligand production per unit doc
lthet = 1.0 ! Proportional loss of ligands due to Fe uptake
! ! ln_p5z enabled
no3rat3 = 0.151 ! N/C ratio in zooplankton
po4rat3 = 0.00943 ! P/C ratio in zooplankton
no3rat3 = 0.1367 ! N/C ratio in zooplankton
po4rat3 = 0.00855 ! P/C ratio in zooplankton
/
!-----------------------------------------------------------------------
&namp2zlim ! parameters for nutrient limitations for PISCES reduced - ln_p2z
!-----------------------------------------------------------------------
concnno3 = 1.e-6 ! Nitrate half saturation of nanophytoplankton
concnfer = 1E-10 ! Iron half saturation for phyto
concbno3 = 3.E-7 ! Nitrate half saturation for DOC remin.
concbfe = 5.E-11 ! Iron half-saturation for DOC remin.
xsizephy = 2.E-6 ! Minimum size criteria for phyto
xsizern = 10.0 ! Size ratio for nanophytoplankton
xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization
caco3r = 0.07 ! mean rain ratio
oxymin = 1.E-6 ! Half-saturation constant for anoxia
/
!-----------------------------------------------------------------------
&namp4zlim ! parameters for nutrient limitations for PISCES std - ln_p4z
......@@ -66,9 +79,9 @@
concdno3 = 3.E-6 ! Nitrate half saturation for diatoms
concnnh4 = 1.E-6 ! NH4 half saturation for phyto
concdnh4 = 3.E-6 ! NH4 half saturation for diatoms
concnfer = 1.7E-9 ! Iron half saturation for phyto
concdfer = 5.E-9 ! Iron half saturation for diatoms
concbfe = 3.E-11 ! Iron half-saturation for DOC remin.
concnfer = 1.5E-9 ! Iron half saturation for phyto
concdfer = 4.5E-9 ! Iron half saturation for diatoms
concbfe = 4.E-11 ! Iron half-saturation for DOC remin.
concbnh4 = 3.E-7 ! NH4 half saturation for DOC remin.
concbno3 = 3.E-7 ! Nitrate half saturation for DOC remin.
xsizedia = 1.E-6 ! Minimum size criteria for diatoms
......@@ -80,8 +93,9 @@
xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization
qnfelim = 10.E-6 ! Optimal quota of phyto
qdfelim = 10.E-6 ! Optimal quota of diatoms
caco3r = 0.2 ! mean rain ratio
caco3r = 0.12 ! mean rain ratio
oxymin = 1.E-6 ! Half-saturation constant for anoxia
ratchl = 10.0 ! C associated with Chlorophyll
/
!-----------------------------------------------------------------------
&namp5zlim ! parameters for nutrient limitations PISCES QUOTA - ln_p5z
......@@ -92,46 +106,47 @@
concnnh4 = 2E-6 ! NH4 half saturation for phyto
concpnh4 = 7E-7 ! NH4 half saturation for picophytoplankton
concdnh4 = 3E-6 ! NH4 half saturation for diatoms
concnpo4 = 2E-6 ! PO4 half saturation for phyto
concppo4 = 7E-7 ! PO4 half saturation for picophytoplankton
concdpo4 = 3E-6 ! PO4 half saturation for diatoms
concnpo4 = 12E-6 ! PO4 half saturation for phyto
concppo4 = 4E-6 ! PO4 half saturation for picophytoplankton
concdpo4 = 18E-6 ! PO4 half saturation for diatoms
concnfer = 3E-9 ! Iron half saturation for phyto
concpfer = 1E-9 ! Iron half saturation for picophytoplankton
concdfer = 4.5E-9 ! Iron half saturation for diatoms
concbfe = 3E-11 ! Half-saturation for Fe limitation of Bacteria
concbnh4 = 4.E-7 ! NH4 half saturation for phyto
concbno3 = 4.E-7 ! Phosphate half saturation for diatoms
concbpo4 = 4.E-7 ! Phosphate half saturation for bacteria
concbfe = 4E-11 ! Half-saturation for Fe limitation of Bacteria
concbnh4 = 3.E-7 ! NH4 half saturation for phyto
concbno3 = 3.E-7 ! Phosphate half saturation for diatoms
concbpo4 = 3.E-7 ! Phosphate half saturation for bacteria
xsizedia = 1.E-6 ! Minimum size criteria for diatoms
xsizephy = 1.E-6 ! Minimum size criteria for phyto
xsizepic = 5.E-7 ! Minimum size criteria for picophyto
xsizern = 3.0 ! Size ratio for nanophytoplankton
xsizerp = 2.0 ! Size ratio for picophytoplankton
xsizern = 2.0 ! Size ratio for nanophytoplankton
xsizerp = 1.5 ! Size ratio for picophytoplankton
xsizerd = 4.0 ! Size ratio for diatoms
xksi1 = 8.E-6 ! half saturation constant for Si uptake
xksi2 = 20E-6 ! half saturation constant for Si/C
xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization
caco3r = 0.3 ! mean rain ratio
caco3r = 0.2 ! mean rain ratio
oxymin = 1.E-6 ! Half-saturation constant for anoxia
ratchl = 10.0 ! C associated with Chlorophyll
/
!-----------------------------------------------------------------------
&namp5zquota ! parameters for nutrient limitations PISCES quota - ln_p5z
!-----------------------------------------------------------------------
qfnopt = 12.E-6 ! Optimal Fe quota of nanophyto
qfpopt = 12.E-6 ! Optimal Fe quota of picophyto
qfdopt = 12.E-6 ! Optimal quota of diatoms
qnnmin = 0.61 ! Minimal N quota for nano
qnnmax = 1.25 ! Maximal N quota for nano
qfnopt = 10.E-6 ! Optimal Fe quota of nanophyto
qfpopt = 10.E-6 ! Optimal Fe quota of picophyto
qfdopt = 10.E-6 ! Optimal quota of diatoms
qnnmin = 0.69 ! Minimal N quota for nano
qnnmax = 1.35 ! Maximal N quota for nano
qpnmin = 0.24 ! Minimal P quota for nano
qpnmax = 1.35 ! Maximal P quota for nano
qnpmin = 1.02 ! Minimal N quota for pico
qnpmax = 1.39 ! Maximal N quota for pico
qppmin = 0.19 ! Minimal P quota for pico
qppmax = 1.15 ! Maximal P quota for pico
qndmin = 0.51 ! Minimal N quota for diatoms
qndmax = 1.25 ! Maximal N quota for diatoms
qnpmin = 0.9 ! Minimal N quota for pico
qnpmax = 1.35 ! Maximal N quota for pico
qppmin = 0.2 ! Minimal P quota for pico
qppmax = 1.1 ! Maximal P quota for pico
qndmin = 0.63 ! Minimal N quota for diatoms
qndmax = 1.35 ! Maximal N quota for diatoms
qpdmin = 0.24 ! Minimal P quota for diatoms
qpdmax = 1.525 ! Maximal P quota for diatoms
qpdmax = 1.67 ! Maximal P quota for diatoms
qfnmax = 60E-6 ! Maximal Fe quota for nano
qfpmax = 60E-6 ! Maximal Fe quota for pico
qfdmax = 60E-6 ! Maximal Fe quota for diatoms
......@@ -148,20 +163,26 @@
ln_p4z_dcyc = .false. ! Diurnal cycle in PISCES
/
!-----------------------------------------------------------------------
&namp2zprod ! parameters for phytoplankton growth for PISCES reduced - ln_p2z
!-----------------------------------------------------------------------
pislopen = 4. ! P-I slope
excretn = 0.05 ! excretion ratio of phytoplankton
bresp = 0.03 ! Basal respiration rate
chlcnm = 0.033 ! Maximum Chl/C in nanophytoplankton
chlcmin = 0.0025 ! Minimum Chl/c in phytoplankton
/
!-----------------------------------------------------------------------
&namp4zprod ! parameters for phytoplankton growth for PISCES std - ln_p4z
!-----------------------------------------------------------------------
pislopen = 2. ! P-I slope
pisloped = 2. ! P-I slope for diatoms
xadap = 0. ! Adaptation factor to low light
pislopen = 3.5 ! P-I slope
pisloped = 3.5 ! P-I slope for diatoms
excretn = 0.05 ! excretion ratio of phytoplankton
excretd = 0.05 ! excretion ratio of diatoms
bresp = 0.033 ! Basal respiration rate
chlcnm = 0.033 ! Maximum Chl/C in nanophytoplankton
chlcdm = 0.05 ! Maximum Chl/C in diatoms
chlcmin = 0.003 ! Minimum Chl/c in phytoplankton
bresp = 0.03 ! Basal respiration rate
chlcmin = 0.0025 ! Minimum Chl/c in phytoplankton
fecnm = 60E-6 ! Maximum Fe/C in nanophytoplankton
fecdm = 60E-6 ! Maximum Fe/C in diatoms
grosip = 0.13 ! mean Si/C ratio
grosip = 0.11 ! mean Si/C ratio
/
!-----------------------------------------------------------------------
&namp5zprod ! parameters for phytoplankton growth for PISCES quota- ln_p5z
......@@ -172,13 +193,15 @@
excretn = 0.05 ! excretion ratio of phytoplankton
excretp = 0.05 ! excretion ratio of picophytoplankton
excretd = 0.05 ! excretion ratio of diatoms
xadap = 0. ! Adaptation factor to low light
bresp = 0.02 ! Basal respiration rate
thetannm = 0.3 ! Maximum Chl/N in nanophytoplankton
thetanpm = 0.3 ! Maximum Chl/N in picophytoplankton
thetandm = 0.4 ! Maximum Chl/N in diatoms
chlcmin = 0.003 ! Minimum Chl/c in phytoplankton
grosip = 0.12 ! mean Si/C ratio
bresp = 0.03 ! Basal respiration rate
chlcmin = 0.0025 ! Minimum Chl/c in phytoplankton
grosip = 0.13 ! mean Si/C ratio
/
!-----------------------------------------------------------------------
&namp2zmort ! parameters for phytoplankton sinks for PISCES std - ln_p2z
!-----------------------------------------------------------------------
wchln = 0.02 ! quadratic mortality of phytoplankton
mpratn = 0.01 ! phytoplankton mortality rate
/
!-----------------------------------------------------------------------
&namp4zmort ! parameters for phytoplankton sinks for PISCES std - ln_p4z
......@@ -206,22 +229,24 @@
resrat2 = 0.005 ! exsudation rate of mesozooplankton
mzrat2 = 0.01 ! mesozooplankton mortality rate
xpref2d = 1. ! mesozoo preference for diatoms
xpref2n = 0.3 ! mesozoo preference for nanophyto.
xpref2n = 0.45 ! mesozoo preference for nanophyto.
xpref2z = 1. ! mesozoo preference for microzoo.
xpref2c = 0.3 ! mesozoo preference for poc
xpref2m = 0.0 ! mesozoo preference for meso
xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton
xthresh2dia = 1E-8 ! diatoms feeding threshold for mesozooplankton
xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton
xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton
xthresh2mes = 1E-8 ! meso feeding threshold for mesozooplankton
xthresh2 = 3E-7 ! Food threshold for grazing
xkgraz2 = 20.E-6 ! half saturation constant for meso grazing
epsher2 = 0.4 ! Efficicency of Mesozoo growth
epsher2min = 0.4 ! Minimum efficiency of mesozoo growth
sigma2 = 0.6 ! Fraction of mesozoo excretion as DOM
sigma2 = 0.67 ! Fraction of mesozoo excretion as DOM
unass2 = 0.3 ! non assimilated fraction of P by mesozoo
grazflux = 3.e3 ! flux-feeding rate
xsigma2 = 0.5 ! Predation window size
xsigma2del = 1.0 ! Predation window size scaling
xsigma2del = 0.5 ! Predation window size scaling
ln_dvm_meso = .false. ! Activates DVM for mesozooplankton
xfracmig = 0.3 ! Fraction of mesozooplankton performing DVM
/
......@@ -231,10 +256,11 @@
part2 = 0.75 ! part of calcite not dissolved in mesozoo guts
grazrat2 = 0.5 ! maximal mesozoo grazing rate
bmetexc2 = .true. ! Metabolic use of excess carbon
resrat2 = 0.005 ! exsudation rate of mesozooplankton
resrat2 = 0.003 ! exsudation rate of mesozooplankton
lmzrat2 = 0.003 ! Linear mortality rate of mesozooplankton
mzrat2 = 0.01 ! mesozooplankton mortality rate
xpref2d = 1. ! meso preference for diatoms
xpref2n = 0.3 ! meso preference for nano
xpref2n = 0.75 ! meso preference for nano
xpref2z = 1. ! meso preference for zoo
xpref2m = 0. ! meso preference for zoo
xpref2c = 0.3 ! meso preference for poc
......@@ -247,38 +273,60 @@
xkgraz2 = 20.E-6 ! half sturation constant for meso grazing
epsher2 = 0.5 ! Efficicency of Mesozoo growth
epsher2min = 0.5 ! Minimum efficiency of mesozoo growth
ssigma2 = 0.5 ! Fraction excreted as semi-labile DOM
srespir2 = 0.2 ! Active respiration
ssigma2 = 0.67 ! Fraction excreted as semi-labile DOM
srespir2 = 0.15 ! Active respiration
unass2c = 0.3 ! non assimilated fraction of C by mesozoo
unass2n = 0.3 ! non assimilated fraction of N by mesozoo
unass2p = 0.3 ! non assimilated fraction of P by mesozoo
xsigma2 = 0.5 ! Predation window size
xsigma2del = 1.0 ! Predation window size scaling
xsigma2del = 0.5 ! Predation window size scaling
grazflux = 3.e3 ! flux-feeding rate
ln_dvm_meso = .false. ! Activates DVM for mesozooplankton
xfracmig = 0.25 ! Fraction of mesozooplankton performing DVM
/
!-----------------------------------------------------------------------
&namp4zzoo ! parameters for microzooplankton for PISCES std - ln_p4z
&namp2zzoo ! parameters for microzooplankton for PISCES reduced - ln_p2z
!-----------------------------------------------------------------------
part = 0.75 ! part of calcite not dissolved in microzoo guts
grazrat = 2.0 ! maximal zoo grazing rate
resrat = 0.02 ! Linear mortality rate of zooplankton
mzrat = 0.005 ! zooplankton mortality rate
xprefc = 0.15 ! Microzoo preference for POM
mzrat = 0.02 ! zooplankton mortality rate
xprefc = 0.15 ! Microzoo preference for POM
xprefn = 1. ! Microzoo preference for Nanophyto
xprefd = 0.8 ! Microzoo preference for Diatoms
xthreshdia = 1.E-8 ! Diatoms feeding threshold for microzooplankton
xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton
xthreshpoc = 1.E-8 ! POC feeding threshold for microzooplankton
xprefz = 0.0 ! Microzoo preference for Microzoo
xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton
xthreshpoc = 1.E-8 ! POC feeding threshold for microzooplankton
xthreshzoo = 1.E-8 ! Microzoo feeding threshold for microzooplankton
xthresh = 3.E-7 ! Food threshold for feeding
xkgraz = 20.E-6 ! half sturation constant for grazing
epsher = 0.4 ! Efficiency of microzoo growth
epshermin = 0.4 ! Minimum efficiency of microzoo growth
sigma1 = 0.6 ! Fraction of microzoo excretion as DOM
unass = 0.3 ! non assimilated fraction of phyto by zoo
/
!-----------------------------------------------------------------------
&namp4zzoo ! parameters for microzooplankton for PISCES std - ln_p4z
!-----------------------------------------------------------------------
part = 0.75 ! part of calcite not dissolved in microzoo guts
grazrat = 2.0 ! maximal zoo grazing rate
resrat = 0.02 ! Linear mortality rate of zooplankton
mzrat = 0.01 ! zooplankton mortality rate
xprefc = 0.15 ! Microzoo preference for POM
xprefn = 1.0 ! Microzoo preference for Nanophyto
xprefd = 0.9 ! Microzoo preference for Diatoms
xprefz = 0.0 ! Microzoo preference for Microzoo
xthreshdia = 1.E-8 ! Diatoms feeding threshold for microzooplankton
xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton
xthreshpoc = 1.E-8 ! POC feeding threshold for microzooplankton
xthreshzoo = 1.E-8 ! Microzoo feeding threshold for microzooplankton
xthresh = 3.E-7 ! Food threshold for feeding
xkgraz = 20.E-6 ! half sturation constant for grazing
epsher = 0.4 ! Efficiency of microzoo growth
epshermin = 0.4 ! Minimum efficiency of microzoo growth
sigma1 = 0.67 ! Fraction of microzoo excretion as DOM
unass = 0.3 ! non assimilated fraction of phyto by zoo
xsigma = 0.5 ! Predation window size
xsigmadel = 1.0 ! Predation window size scaling
xsigmadel = 0.5 ! Predation window size scaling
/
!-----------------------------------------------------------------------
&namp5zzoo ! parameters for microzooplankton
......@@ -286,12 +334,13 @@
part = 0.75 ! part of calcite not dissolved in microzoo gutsa
grazrat = 2.0 ! maximal zoo grazing rate
bmetexc = .true. ! Metabolic use of excess carbon
resrat = 0.02 ! exsudation rate of zooplankton
mzrat = 0.005 ! zooplankton mortality rate
resrat = 0.01 ! exsudation rate of zooplankton
lmzrat = 0.01 ! Linear mortality rate of zooplankton
mzrat = 0.01 ! zooplankton mortality rate
xprefc = 0.15 ! Microzoo preference for POM
xprefn = 1.0 ! Microzoo preference for Nanophyto
xprefn = 0.95 ! Microzoo preference for Nanophyto
xprefp = 1.0 ! Microzoo preference for picophyto
xprefd = 1.0 ! Microzoo preference for Diatoms
xprefd = 0.85 ! Microzoo preference for Diatoms
xprefz = 0. ! Microzoo preference for microzooplankton
xthreshdia = 1.E-8 ! Diatoms feeding threshold for microzooplankton
xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton
......@@ -302,13 +351,13 @@
xkgraz = 20.E-6 ! half saturation constant for grazing
epsher = 0.5 ! Efficiency of microzoo growth
epshermin = 0.5 ! Minimum efficiency of microzoo growth
ssigma = 0.5 ! Fraction excreted as semi-labile DOM
srespir = 0.2 ! Active respiration
ssigma = 0.67 ! Fraction excreted as semi-labile DOM
srespir = 0.15 ! Active respiration
unassc = 0.3 ! non assimilated fraction of C by zoo
unassn = 0.3 ! non assimilated fraction of N by zoo
unassp = 0.3 ! non assimilated fraction of P by zoo
xsigma = 0.5 ! Predation window size
xsigmadel = 1.0 ! Predation window size scaling
xsigmadel = 0.5 ! Predation window size scaling
/
!-----------------------------------------------------------------------
&nampisfer ! parameters for iron chemistry
......@@ -328,24 +377,30 @@
xsiremlab = 0.03 ! fast remineralization rate of Si
xsilab = 0.5 ! Fraction of labile biogenic silica
feratb = 60.E-6 ! Fe/C quota in bacteria
xkferb = 4E-10 ! Half-saturation constant for bacteria Fe/C
xkferb = 3E-10 ! Half-saturation constant for bacteria Fe/C
! ! ln_p5z
xremikc = 0.4 ! remineralization rate of DOC
xremikn = 0.4 ! remineralization rate of DON
xremikp = 0.5 ! remineralization rate of DOP
xremikp = 0.4 ! remineralization rate of DOP
/
!-----------------------------------------------------------------------
&nampispoc ! parameters for organic particles
!-----------------------------------------------------------------------
xremip = 0.035 ! remineralisation rate of POC
jcpoc = 15 ! Number of lability classes
rshape = 1.0 ! Shape of the gamma function
! ! ln_p5z
xremipc = 0.028 ! remineralisation rate of POC
xremipc = 0.035 ! remineralisation rate of POC
xremipn = 0.03 ! remineralisation rate of PON
xremipp = 0.035 ! remineralisation rate of POP
/
!-----------------------------------------------------------------------
&nampisdiaz ! Namelist parameters for diazotrophy
!-----------------------------------------------------------------------
nitrfix = 2.e-7 ! Nitrogen fixation rate
diazolight = 30. ! Diazotrophs sensitivity to light (W/m2)
concfediaz = 1.5e-10 ! Diazotrophs half-saturation Cste for Iron
/
!-----------------------------------------------------------------------
&nampiscal ! parameters for Calcite chemistry
!-----------------------------------------------------------------------
kdca = 100. ! calcite dissolution rate constant (1/time)
......@@ -383,11 +438,14 @@
xklig = 1.E-9 ! 1/2 saturation constant of photolysis
/
!-----------------------------------------------------------------------
&nampissed ! Namelist parameters for sediment mobilisation
&nampissed ! Namelist parameters for burial in sediments ( Dune et Al. 2007 )
!-----------------------------------------------------------------------
nitrfix = 2.e-7 ! Nitrogen fixation rate
diazolight = 30. ! Diazotrophs sensitivity to light (W/m2)
concfediaz = 1.e-10 ! Diazotrophs half-saturation Cste for Iron
bureffmin = 0.020 !: Minimum burial efficiency
bureffvar = 0.053 !: Variable coef. for burial efficiency
sedsilfrac = 0.03 ! percentage of silica loss in the sediments
sedcalfrac = 0.78 ! percentage of calcite loss in the sediments ( 0.78 is for river x1.5 )
sedfactcalmin = 0.3 !: Minimum value for dissolving calcite at the bottom
sedfactcalvar = 0.7 !: Variable value for dissolving calcite at the bottom
/
!-----------------------------------------------------------------------
&nampisice ! Prescribed sea ice tracers
......@@ -436,91 +494,23 @@
!-----------------------------------------------------------------------
&nampisdmp ! Damping
!-----------------------------------------------------------------------
ln_pisdmp = .true. ! Relaxation for some tracers to a mean value
nn_pisdmp = 5475 ! Frequency of Relaxation
/
!-----------------------------------------------------------------------
&nampismass ! Mass conservation
!-----------------------------------------------------------------------
ln_check_mass = .false. ! Check mass conservation
/
!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
!! PISCES reduced (key_pisces_reduced, ex LOBSTER) : namelists
!! 1 - biological parameters for phytoplankton (namlobphy)
!! 2 - biological parameters for nutrients (namlobnut)
!! 3 - biological parameters for zooplankton (namlobzoo)
!! 4 - biological parameters for detritus (namlobdet)
!! 5 - biological parameters for DOM (namlobdom)
!! 6 - parameters from aphotic layers to sediment (namlobsed)
!! 7 - general coefficients (namlobrat)
!! 8 - optical parameters (namlobopt)
!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
!-----------------------------------------------------------------------
&namlobphy ! biological parameters for phytoplankton
!-----------------------------------------------------------------------
tmumax = 1.21e-5 ! maximal phytoplankton growth rate [s-1]
rgamma = 0.05 ! phytoplankton exudation fraction [%]
fphylab = 0.75 ! NH4 fraction of phytoplankton exsudation
tmminp = 5.8e-7 ! minimal phytoplancton mortality rate [0.05/86400 s-1=20 days]
aki = 33. ! light photosynthesis half saturation constant[W/m2]
/
!-----------------------------------------------------------------------
&namlobnut ! biological parameters for nutrients
!-----------------------------------------------------------------------
akno3 = 0.7 ! nitrate limitation half-saturation value [mmol/m3]
aknh4 = 0.001 ! ammonium limitation half-saturation value [mmol/m3]
taunn = 5.80e-7 ! nitrification rate [s-1]
psinut = 3. ! inhibition of nitrate uptake by ammonium
/
!-----------------------------------------------------------------------
&namlobzoo ! biological parameters for zooplankton
!-----------------------------------------------------------------------
rppz = 0.8 ! zooplankton nominal preference for phytoplancton food [%]
taus = 9.26E-6 ! specific zooplankton maximal grazing rate [s-1]
! ! 0.75/86400 s-1=8.680555E-6 1/86400 = 1.15e-5
aks = 1. ! half-saturation constant for total zooplankton grazing [mmolN.m-3]
rpnaz = 0.3 ! non-assimilated phytoplankton by zooplancton [%]
rdnaz = 0.3 ! non-assimilated detritus by zooplankton [%]
tauzn = 8.1e-7 ! zooplancton specific excretion rate [0.1/86400 s-1=10 days]
fzoolab = 0.5 ! NH4 fraction of zooplankton excretion
fdbod = 0.5 ! zooplankton mortality fraction that goes to detritus
tmminz = 2.31e-6 ! minimal zooplankton mortality rate [(mmolN/m3)-1 d-1]
/
!-----------------------------------------------------------------------
&namlobdet ! biological parameters for detritus
!-----------------------------------------------------------------------
taudn = 5.80e-7 ! detritus breakdown rate [0.1/86400 s-1=10 days]
fdetlab = 0. ! NH4 fraction of detritus dissolution
/
!-----------------------------------------------------------------------
&namlobdom ! biological parameters for DOM
!-----------------------------------------------------------------------
taudomn = 6.43e-8 ! DOM breakdown rate [s-1]
! ! slow remineralization rate of semi-labile dom to nh4 (1 month)
/
!-----------------------------------------------------------------------
&namlobsed ! parameters from aphotic layers to sediment
!-----------------------------------------------------------------------
sedlam = 3.86e-7 ! time coefficient of POC remineralization in sediments [s-1]
sedlostpoc = 0. ! mass of POC lost in sediments
vsed = 3.47e-5 ! detritus sedimentation speed [m/s]
xhr = -0.858 ! coeff for martin''s remineralisation profile
/
!-----------------------------------------------------------------------
&namlobrat ! general coefficients
!-----------------------------------------------------------------------
rcchl = 60. ! Carbone/Chlorophyl ratio [mgC.mgChla-1]
redf = 6.56 ! redfield ratio (C:N) for phyto
reddom = 6.56 ! redfield ratio (C:N) for DOM
/
!-----------------------------------------------------------------------
&namlobopt ! optical parameters
!-----------------------------------------------------------------------
xkg0 = 0.0232 ! green absorption coefficient of water
xkr0 = 0.225 ! red absorption coefficent of water
xkgp = 0.074 ! green absorption coefficient of chl
xkrp = 0.037 ! red absorption coefficient of chl
xlg = 0.674 ! green chl exposant for absorption
xlr = 0.629 ! red chl exposant for absorption
rpig = 0.7 ! chla/chla+pheo ratio
ln_pisdmp = .true. ! Relaxation for some tracers to a mean value
ln_pisdmp_alk = .true.
/
!-----------------------------------------------------------------------
&nampisdbg ! Namelist parameters for debugging
!-----------------------------------------------------------------------
ln_bio = .true. ! Enable biological processes
ln_flx = .true. ! Enable air-sea gas exchange
ln_sed = .true. ! Enable sediment mobilisation processes
ln_lys = .true. ! Enable carbonate chemistry
ln_fechem = .true. ! Enable Iron chemistry
ln_prod = .true. ! Enable Phyptoplankton growth rate
ln_mort = .true. ! Enable Phyptoplankton mortality
ln_micro = .true. ! Enable microzooplankton
ln_meso = .true. ! Enable mesozooplankton
ln_poc = .true. ! Enable organic particles processes
ln_agg = .true. ! Enable particles Aggregation
ln_rem = .true. ! Enable Remineralisation
ln_diaz = .true. ! Enable diazotrophy
/
cfgs/SHARED/namelist_ref
View file @ dd59ced6
!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
!! NEMO/OCE : Reference namelist_ref !!
!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
!! NEMO/OCE : 1 - Domain & run manager (namrun, namcfg, namdom, namtsd, namcrs, namc1d, namc1d_uvd)
!! NEMO/OCE : 1 - Domain & run manager (namrun, namcfg, namdom, namtsd, namc1d, namc1d_uvd)
!! namelists 2 - Surface boundary (namsbc, namsbc_flx, namsbc_blk, namsbc_cpl,
!! namsbc_sas, namtra_qsr, namsbc_rnf,
!! namisf, namsbc_apr,
......@@ -11,7 +11,7 @@
!! 5 - Tracer (nameos, namtra_adv, namtra_ldf, namtra_eiv, namtra_dmp)
!! 6 - dynamics (namdyn_adv, namdyn_vor, namdyn_hpg, namdyn_spg, namdyn_ldf)
!! 7 - Vertical physics (namzdf, namzdf_ric, namzdf_tke, namzdf_gls, namzdf_iwm)
!! 8 - diagnostics (namnc4, namtrd, namspr, namflo, namhsb)
!! 8 - diagnostics (namnc4, namtrd, namspr)
!! 9 - Obs & Assim (namobs, nam_asminc)
!! 10 - miscellaneous (nammpp, namctl, namsto)
!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
......@@ -24,7 +24,6 @@
!! namcfg parameters of the configuration (default: user defined GYRE)
!! namwad Wetting and drying (default: OFF)
!! namtsd data: temperature & salinity (default: OFF)
!! namcrs coarsened grid (for outputs and/or TOP) (ln_crs =T)
!! namc1d 1D configuration options (ln_c1d =T)
!! namc1d_dyndmp 1D newtonian damping applied on currents (ln_c1d =T)
!! namc1d_uvd 1D data (currents) (ln_c1d =T)
......@@ -41,7 +40,6 @@
nn_time0 = 0 ! initial time of day in hhmm
nn_leapy = 0 ! Leap year calendar (1) or not (0)
ln_rstart = .false. ! start from rest (F) or from a restart file (T)
ln_1st_euler = .false. ! =T force a start with forward time step (ln_rstart=T)
nn_rstctl = 0 ! restart control ==> activated only if ln_rstart=T
! ! = 0 nn_date0 read in namelist ; nn_it000 : read in namelist
! ! = 1 nn_date0 read in namelist ; nn_it000 : check consistancy between namelist and restart
......@@ -65,19 +63,18 @@
nn_chunksz = 0 ! chunksize (bytes) for NetCDF file (works only with iom_nf90 routines)
ln_xios_read = .false. ! use XIOS to read restart file (only for a single file restart)
nn_wxios = 0 ! use XIOS to write restart file 0 - no, 1 - single file output, 2 - multiple file output
ln_top = .true. ! Consider (T) or bypass (F) the TOP routines when the key_top is activated
/
!-----------------------------------------------------------------------
&namdom ! time and space domain
!-----------------------------------------------------------------------
ln_linssh = .false. ! =T linear free surface ==>> model level are fixed in time
!
rn_Dt = 5400. ! time step for the dynamics and tracer
rn_atfp = 0.1 ! asselin time filter parameter
!
ln_crs = .false. ! Logical switch for coarsening module (T => fill namcrs)
ln_c1d = .false. ! Single column domain (1x1pt) (T => fill namc1d)
!
ln_meshmask = .true. ! =T create a mesh file
ln_meshmask = .true. ! =T create a mesh file
!
ln_shuman = .false. ! =T shuman averaging active (RK3 only)
/
!-----------------------------------------------------------------------
&namcfg ! parameters of the configuration (default: use namusr_def in namelist_cfg)
......@@ -91,9 +88,6 @@
!
ln_write_cfg = .false. ! (=T) create the domain configuration file
cn_domcfg_out = "domain_cfg_out" ! newly created domain configuration filename
!
ln_use_jattr = .false. ! use (T) the file attribute: open_ocean_jstart, if present
! ! in netcdf input files, as the start j-row for reading
/
!-----------------------------------------------------------------------
&namtile ! parameters of the tiling
......@@ -133,47 +127,22 @@
!-----------------------------------------------------------------------
&namwad ! Wetting and Drying (WaD) (default: OFF)
!-----------------------------------------------------------------------
ln_wd_il = .false. ! T/F activation of iterative limiter
ln_wd_dl = .false. ! T/F activation of directional limiter
ln_wd_dl_bc = .false. ! T/F Directional limiteer Baroclinic option
ln_wd_dl_bc = .false. ! T/F Directional limiter Baroclinic option
ln_wd_dl_rmp = .false. ! T/F Turn on directional limiter ramp
rn_wdmin0 = 0.30 ! depth at which WaD starts
rn_wdmin1 = 0.2 ! Minimum wet depth on dried cells
rn_wdmin2 = 0.0001 ! Tolerance of min wet depth on dried cells
rn_wdld = 2.5 ! Land elevation below which WaD is allowed
nn_wdit = 20 ! Max iterations for WaD limiter
rn_wd_sbcdep = 5.0 ! Depth at which to taper sbc fluxes
rn_wd_sbcfra = 0.999 ! Fraction of SBC fluxes at taper depth (Must be <1)
/
!-----------------------------------------------------------------------
&namcrs ! coarsened grid (for outputs and/or TOP) (ln_crs =T)
!-----------------------------------------------------------------------
nn_factx = 3 ! Reduction factor of x-direction
nn_facty = 3 ! Reduction factor of y-direction
nn_binref = 0 ! Bin centering preference: NORTH or EQUAT
! ! 0, coarse grid is binned with preferential treatment of the north fold
! ! 1, coarse grid is binned with centering at the equator
! ! Symmetry with nn_facty being odd-numbered. Asymmetry with even-numbered nn_facty.
ln_msh_crs = .false. ! =T create a mesh & mask file
nn_crs_kz = 0 ! 0, MEAN of volume boxes
! ! 1, MAX of boxes
! ! 2, MIN of boxes
ln_crs_wn = .true. ! wn coarsened (T) or computed using horizontal divergence ( F )
/
!-----------------------------------------------------------------------
&namc1d ! 1D configuration options (ln_c1d =T default: PAPA station)
!-----------------------------------------------------------------------
rn_lat1d = 50.1 ! Column latitude
rn_lon1d = -144.9 ! Column longitude
/
!-----------------------------------------------------------------------
&namc1d_dyndmp ! U & V newtonian damping (ln_c1d =T default: OFF)
!-----------------------------------------------------------------------
ln_dyndmp = .false. ! add a damping term (T) or not (F)
/
!-----------------------------------------------------------------------
&namc1d_uvd ! data: U & V currents (ln_c1d =T default: OFF)
!-----------------------------------------------------------------------
ln_dyndmp = .false. ! add a U & V newtonian damping term (T) or not (F)
! ! =T read U-V fields for:
ln_uvd_init = .false. ! ocean initialisation
ln_uvd_dyndmp = .false. ! U-V restoring
......@@ -232,8 +201,10 @@
ln_dm2dc = .false. ! daily mean to diurnal cycle on short wave
ln_ssr = .false. ! Sea Surface Restoring on T and/or S (T => fill namsbc_ssr)
nn_fwb = 0 ! FreshWater Budget: =0 unchecked
! ! =1 global mean of e-p-r set to zero at each time step
! ! =2 annual global mean of e-p-r set to zero
! ! =1 volume set to zero at each time step
! ! =2 volume adjusted from previous year budget (uniform correction to emp)
! ! =3 volume adjusted from previous year budget (non-uniform correction - proportional to erp)
! ! =4 special treatment for ISOMIP+ test case
ln_rnf = .false. ! runoffs (T => fill namsbc_rnf)
ln_apr_dyn = .false. ! Patm gradient added in ocean & ice Eqs. (T => fill namsbc_apr )
ln_wave = .false. ! Activate coupling with wave (T => fill namsbc_wave)
......@@ -261,6 +232,7 @@
ln_COARE_3p0 = .false. ! "COARE 3.0" algorithm (Fairall et al. 2003)
ln_COARE_3p6 = .false. ! "COARE 3.6" algorithm (Edson et al. 2013)
ln_ECMWF = .false. ! "ECMWF" algorithm (IFS cycle 45r1)
ln_MFS = .false. ! "MFS" algorithm (MFS/BS Copernicus, Petenuzzo et al 2010)
ln_ANDREAS = .false. ! "ANDREAS" algorithm (Andreas et al. 2015)
rn_zqt = 10. ! Air temperature & humidity reference height (m)
rn_zu = 10. ! Wind vector reference height (m)
......@@ -279,12 +251,23 @@
ln_humi_dpt = .false. ! humidity "sn_humi" is dew-point temperature [K]
ln_humi_rlh = .false. ! humidity "sn_humi" is relative humidity [%]
ln_tair_pot = .false. ! air temperature read in "sn_tair" is already POTENTIAL TEMPERATURE, NOT ABSOLUTE (ECMWF => ln_tair_pot=.false.)
ln_prec_met = .false. ! precipitation read in "sn_prec" is in [m]
!!
!! Bulk transfer coefficients over sea-ice: (relevant IF: nn_ice >=1 )
ln_Cx_ice_cst = .true. ! use constant ice-air bulk transfer coefficients (value given below)
rn_Cd_i = 1.4e-3 ! sea-ice drag coefficient
rn_Ce_i = 1.4e-3 ! " sublimation coefficient
rn_Ch_i = 1.4e-3 ! " sensible heat flux coefficient
rn_Cd_ia = 1.4e-3 ! sea-ice drag coefficient
rn_Ce_ia = 1.4e-3 ! " sublimation coefficient
rn_Ch_ia = 1.4e-3 ! " sensible heat flux coefficient
ln_Cx_ice_frm = .false. ! use form drag param from Tsamadoes et al. 2014
nn_frm = 2 ! = 1 : affects momentum and heat transfer coefficient (ocean-ice and atmos-ice)
! = 2 : affects only momentum transfer coefficient (ocean-ice and atmos-ice) (default)
! = 3 : affect momentum and heat transfer coefficient (atmos-ice), and only momentum transfer coefficient (ocean-ice)
rn_Cs_io = 0.002 ! ice-ocn skin drag [0.0005,0.005]
rn_Cs_ia = 0.0005 ! ice-air skin drag [0.0001,0.001]
rn_Cr_ia = 0.2 ! ridge/keel drag coefficient [0,1]
rn_Cr_io = 0.2 ! ridge/keel drag coefficient [0,1]
rn_Cf_ia = 0.2 ! floe edge atm [0,1]
rn_Cf_io = 0.2 ! floe edge ocean [0,1]
ln_Cx_ice_AN05 = .false. ! (Andreas et al. 2005)
ln_Cx_ice_LU12 = .false. ! (Lupkes et al. 2012)
ln_Cx_ice_LG15 = .false. ! (Lupkes & Gryanik 2015)
......@@ -312,7 +295,7 @@
&namsbc_abl ! Atmospheric Boundary Layer formulation (ln_abl = T)
!-----------------------------------------------------------------------
cn_dir = './' ! root directory for the location of the ABL grid file
cn_dom = 'dom_cfg_abl.nc'
cn_dom = 'dom_cfg_abl'
cn_ablrst_in = "restart_abl" ! suffix of abl restart name (input)
cn_ablrst_out = "restart_abl" ! suffix of abl restart name (output)
......@@ -321,15 +304,17 @@
ln_rstart_abl = .false.
ln_hpgls_frc = .false.
ln_pga_abl = .false. ! ABL pressure gradient anomaly forcing
ln_geos_winds = .false.
ln_smth_pblh = .false.
nn_dyn_restore = 0 ! restoring option for dynamical ABL variables: = 0 no restoring
! = 1 equatorial restoring
! = 2 global restoring
rn_ldyn_min = 4.5 ! dynamics nudging magnitude inside the ABL [hour] (~3 rn_Dt)
rn_ldyn_max = 1.5 ! dynamics nudging magnitude above the ABL [hour] (~1 rn_Dt)
rn_ltra_min = 4.5 ! tracers nudging magnitude inside the ABL [hour] (~3 rn_Dt)
rn_ltra_max = 1.5 ! tracers nudging magnitude above the ABL [hour] (~1 rn_Dt)
rn_ldyn_min = 0. ! dynamics nudging magnitude inside the ABL [hour] (~3 rn_Dt)
rn_ldyn_max = 0. ! dynamics nudging magnitude above the ABL [hour] (~1 rn_Dt)
rn_ltra_min = 0. ! tracers nudging magnitude inside the ABL [hour] (~3 rn_Dt)
rn_ltra_max = 0. ! tracers nudging magnitude above the ABL [hour] (~1 rn_Dt)
rn_vfac = 0.
nn_amxl = 0 ! mixing length: = 0 Deardorff 80 length-scale
! = 1 length-scale based on the distance to the PBL height
! = 2 Bougeault & Lacarrere 89 length-scale
......@@ -369,7 +354,7 @@
!*** receive ***
sn_rcv_w10m = 'none' , 'no' , '' , '' , ''
sn_rcv_taumod = 'coupled' , 'no' , '' , '' , ''
sn_rcv_tau = 'oce only' , 'no' , 'cartesian' , 'eastward-northward' , 'U,V'
sn_rcv_tau = 'oce only' , 'no' , 'cartesian' , 'eastward-northward' , ''
sn_rcv_dqnsdt = 'coupled' , 'no' , '' , '' , ''
sn_rcv_qsr = 'oce and ice' , 'no' , '' , '' , ''
sn_rcv_qns = 'oce and ice' , 'no' , '' , '' , ''
......@@ -380,21 +365,22 @@
sn_rcv_iceflx = 'none' , 'no' , '' , '' , ''
sn_rcv_mslp = 'none' , 'no' , '' , '' , ''
sn_rcv_ts_ice = 'none' , 'no' , '' , '' , ''
sn_rcv_qtrice = 'none' , 'no' , '' , '' , ''
sn_rcv_isf = 'none' , 'no' , '' , '' , ''
sn_rcv_icb = 'none' , 'no' , '' , '' , ''
sn_rcv_hsig = 'none' , 'no' , '' , '' , 'T'
sn_rcv_phioc = 'none' , 'no' , '' , '' , 'T'
sn_rcv_sdrfx = 'none' , 'no' , '' , '' , 'T'
sn_rcv_sdrfy = 'none' , 'no' , '' , '' , 'T'
sn_rcv_wper = 'none' , 'no' , '' , '' , 'T'
sn_rcv_wnum = 'none' , 'no' , '' , '' , 'T'
sn_rcv_wstrf = 'none' , 'no' , '' , '' , 'T'
sn_rcv_wdrag = 'none' , 'no' , '' , '' , 'T'
sn_rcv_charn = 'none' , 'no' , '' , '' , 'T'
sn_rcv_taw = 'none' , 'no' , '' , '' , 'U,V'
sn_rcv_bhd = 'none' , 'no' , '' , '' , 'T'
sn_rcv_tusd = 'none' , 'no' , '' , '' , 'T'
sn_rcv_tvsd = 'none' , 'no' , '' , '' , 'T'
sn_rcv_hsig = 'none' , 'no' , '' , '' , ''
sn_rcv_phioc = 'none' , 'no' , '' , '' , ''
sn_rcv_sdrfx = 'none' , 'no' , '' , '' , ''
sn_rcv_sdrfy = 'none' , 'no' , '' , '' , ''
sn_rcv_wper = 'none' , 'no' , '' , '' , ''
sn_rcv_wnum = 'none' , 'no' , '' , '' , ''
sn_rcv_wstrf = 'none' , 'no' , '' , '' , ''
sn_rcv_wdrag = 'none' , 'no' , '' , '' , ''
sn_rcv_charn = 'none' , 'no' , '' , '' , ''
sn_rcv_taw = 'none' , 'no' , '' , '' , ''
sn_rcv_bhd = 'none' , 'no' , '' , '' , ''
sn_rcv_tusd = 'none' , 'no' , '' , '' , ''
sn_rcv_tvsd = 'none' , 'no' , '' , '' , ''
/
!-----------------------------------------------------------------------
&namsbc_sas ! Stand-Alone Surface module: ocean data (SAS_SRC only)
......@@ -435,14 +421,20 @@
! ! type of penetration (default: NO selection)
ln_qsr_rgb = .false. ! RGB light penetration (Red-Green-Blue)
ln_qsr_2bd = .false. ! 2BD light penetration (two bands)
ln_qsr_5bd = .false. ! 5BD light penetration (IR-Red-Green-Blue-UV)
ln_qsr_bio = .false. ! bio-model light penetration
! ! RGB & 2BD choices:
! ! RGB, 2BD & 5BD choices:
rn_abs = 0.58 ! RGB & 2BD: fraction absorbed in the very near surface
rn_si0 = 0.35 ! RGB & 2BD: shortess depth of extinction
nn_chldta = 0 ! RGB : Chl data (=1) or cst value (=0)
nn_chldta = 0 ! RGB & 5BD: cst value (=0) or Chl data (=1)
nn_chlprfl = 1 ! Chl vertical profile (nn_chldta = 1)
! 0 = vertical extrapolation of surface data
! 1 = vertical analytical profile deduced from surface data
! 2 = 3D Chl data
rn_si1 = 23.0 ! 2BD : longest depth of extinction
rn_par = 0.47 ! 5BD : fraction of photosynthetically active radiation
cn_dir = './' ! root directory for the chlorophyl data location
cn_dir = './' ! root directory for the chlorophyll data location
!___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________!
! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename !
......@@ -501,7 +493,7 @@
&namsbc_apr ! Atmospheric pressure used as ocean forcing (ln_apr_dyn =T)
!-----------------------------------------------------------------------
rn_pref = 101000. ! reference atmospheric pressure [N/m2]/
ln_ref_apr = .false. ! ref. pressure: global mean Patm (T) or a constant (F)
nn_ref_apr = 0 ! ref. pressure: 0: constant, 1: global mean or 2: read in a file
ln_apr_obc = .false. ! inverse barometer added to OBC ssh data
cn_dir = './' ! root directory for the Patm data location
......@@ -509,6 +501,7 @@
! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename !
sn_apr = 'patm' , -1. ,'somslpre' , .true. , .true. , 'yearly' , '' , '' , ''
sn_apref = 'mean_patm' , -1. ,'meanapr' , .true. , .true. , 'yearly' , '' , '' , ''
/
!-----------------------------------------------------------------------
&namisf ! Top boundary layer (ISF) (default: OFF)
......@@ -627,8 +620,13 @@
! ! diagnostics:
ln_bergdia = .true. ! Calculate budgets
nn_verbose_level = 0 ! Turn on more verbose output if level > 0
nn_verbose_write = 15 ! Timesteps between verbose messages
nn_sample_rate = 1 ! Timesteps between sampling for trajectory storage
! ! trajectories and verbose:
! rn_verbose_write_days and rn_sample_rate_days can be decimals (ex 1.5)
! "0." is an allowed value, no trajectory and no verbose message will be written
! except "-1", negative values are forbidden
rn_verbose_write_days = 2.0 ! Number of days between verbose messages (or every timestep if == -1)
rn_sample_rate_days = 2.0 ! Number of days between sampling for trajectory storage (or every timestep if == -1)
!
! ! iceberg setting:
! ! Initial mass required for an iceberg of each class
......@@ -647,16 +645,27 @@
rn_bits_erosion_fraction = 0. ! Fraction of erosion melt flux to divert to bergy bits
rn_sicn_shift = 0. ! Shift of sea-ice concn in erosion flux (0<sicn_shift<1)
ln_passive_mode = .false. ! iceberg - ocean decoupling
nn_test_icebergs = 10 ! Create test icebergs of this class (-1 = no)
! ! Put a test iceberg at each gridpoint in box (lon1,lon2,lat1,lat2)
rn_test_box = 108.0, 116.0, -66.0, -58.0
ln_use_test = .false. ! Use test icebergs, their number is specified by nn_test_icebergs
nn_test_icebergs = 0 ! Create test icebergs of this class ( must be > 0 while using test icebergs)
! ! Put a test iceberg at each gridpoint in box (lon1,lon2,lat1,lat2)
rn_test_box = 108.0, 116.0, -66.0, -58.0 ! Put a test iceberg at each gridpoint in box (lon1,lon2,lat1,lat2)
ln_use_calving = .false. ! Use calving data even when nn_test_icebergs > 0
rn_speed_limit = 0. ! CFL speed limit for a berg (safe value is 0.4, see #2581)
!
ln_M2016 = .false. ! use Merino et al. (2016) modification (use of 3d ocean data instead of only sea surface data)
ln_icb_grd = .false. ! ground icb when icb bottom level hit oce bottom level (need ln_M2016 to be activated)
!
ln_icb_bas = .false. ! activate diagnostics by basin
cn_icbbasins_file = 'icbbasinid.nc' ! file defining the basin location
cn_icbbasins_var2d = 'basinid' ! basin id map
cn_icbbasins_var1d = 'basins' ! variable to define the dimension variable in the output (correspondance between basin index and basin id)
nn_icb_basins = 20 ! number of basin (in the netcdf file)
ln_rst_test_bas = .false. ! is there test iceberg in the restart (ie generated with nn_test_icebergs > -1)
!
cn_dir = './' ! root directory for the calving data location
!
! ln_use_calving = .true. required an input file (sn_icb). The unit of the variable 'calvingmask' is kg/s.
!___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________!
! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename !
......@@ -666,8 +675,13 @@
&namsbc_fwb ! freshwater-budget adjustment (nn_fwb > 0)
!-----------------------------------------------------------------------
rn_fwb0 = 0.0 ! Initial freshwater adjustment flux [kg/m2/s] (nn_fwb = 2)
nn_fwb_voltype = 1 ! = 1 : Control ICE+OCEAN volume
! ! = 2 : Control OCEAN volume
ln_hvolg_var = .false. ! = T : Set an analytical variation of volume:
rn_hvolg_amp = 17.e-3 ! Peak to peak seasonnal variation (m)
rn_hvolg_trd = 0.0 ! Trend (m/s)
nn_hvolg_mth = 8 ! Month when volume anomaly crosses 0 (1-12)
/
!!======================================================================
!! *** Lateral boundary condition *** !!
!! !!
......@@ -705,7 +719,6 @@
ln_tide = .false. ! Activate tides
nn_tide_var = 1 ! Variant of tidal parameter set and tide-potential computation
! ! (1: default; 0: compatibility with previous versions)
ln_tide_dia = .false. ! Enable tidal diagnostic output
ln_tide_pot = .false. ! use tidal potential forcing
rn_tide_gamma = 0.7 ! Tidal tilt factor
ln_scal_load = .false. ! Use scalar approximation for
......@@ -882,6 +895,9 @@
!
! ! S-EOS coefficients (ln_seos=T):
! ! rd(T,S,Z)*rho0 = -a0*(1+.5*lambda*dT+mu*Z+nu*dS)*dT+b0*dS
! ! dT = T-rn_T0 ; dS = S-rn_S0
rn_T0 = 10. ! reference temperature
rn_S0 = 35. ! reference salinity
rn_a0 = 1.6550e-1 ! thermal expension coefficient
rn_b0 = 7.6554e-1 ! saline expension coefficient
rn_lambda1 = 5.9520e-2 ! cabbeling coeff in T^2 (=0 for linear eos)
......@@ -900,6 +916,7 @@
ln_traadv_fct = .false. ! FCT scheme
nn_fct_h = 2 ! =2/4, horizontal 2nd / 4th order
nn_fct_v = 2 ! =2/4, vertical 2nd / COMPACT 4th order
nn_fct_imp = 1 ! =1/2, optimized / accurate treatment of implicit part
ln_traadv_mus = .false. ! MUSCL scheme
ln_mus_ups = .false. ! use upstream scheme near river mouths
ln_traadv_ubs = .false. ! UBS scheme
......@@ -967,11 +984,41 @@
! ! = 20 F(i,j) =ldf_c2d
! ! = 21 F(i,j,t) =Treguier et al. JPO 1997 formulation
! ! = 30 F(i,j,k) =ldf_c2d * ldf_c1d
! ! = 32 F(i,j,t) = GEOMETRIC parameterization (=> fill namldf_eke)
! ! time invariant coefficients: aei0 = 1/2 Ue*Le
rn_Ue = 0.02 ! lateral diffusive velocity [m/s] (nn_aht_ijk_t= 0, 10, 20, 30)
rn_Le = 200.e+3 ! lateral diffusive length [m] (nn_aht_ijk_t= 0, 10)
!
ln_ldfeiv_dia =.false. ! diagnose eiv stream function and velocities
ln_eke_equ =.false. ! switch on update of GEOMETRIC eddy energy equation (=> fill namldf_eke)
! forced to be true if nn_aei_ijk_t = 32
/
!----------------------------------------------------------------------------------
&namldf_eke ! GEOMETRIC param. (total EKE equation) (nn_aei_ijk_t = 32)
!----------------------------------------------------------------------------------
rn_ekedis = 100. ! dissipation time scale of EKE [days] (default: orca2 value)
nn_eke_dis = 0 ! dissipation option
! ! = 0 constant in space
! ! =-20 read in geom_diss_2D.nc file
rn_geom = 0.06 ! geometric parameterization master coefficient (>0 & <1) (default: orca2 value)
rn_eke_init = 1.e-1 ! initial total EKE value
rn_eke_min = 1.e+0 ! background value of total EKE
rn_ross_min = 4.e+3 ! tapering of aeiv based on min Rossby radius [m]
! ! set to zero to not taper it
rn_eke_lap = 500. ! Laplacian diffusion coefficient of EKE
! ! this is in all options below, so set it to zero and nothing is done
rn_aeiv_min = 1.e+1 ! minimum bound of eiv coefficient
rn_aeiv_max = 1.5e+4 ! maximum bound of eiv coefficient
rn_SFmin = 1.0 ! minimum bound of Structure Function
rn_SFmax = 1.0 ! maximum bound of Structure Function
nn_eke_opt = 1 ! options for terms to include in EKE budget
! ! = 0 PE->EKE conversion, dissipation only
! ! = 1 as 0 but with advection
! ! = 2 as 1 but with additional KE->EKE conversion
! ! for testing purposes:
! ! = 88 only advection by depth-averaged flow
! ! = 99 only Laplacian diffusion
ln_adv_wav = .false. ! include advection at long Rossby speed
ln_beta_plane = .false. ! beta plane option for computing long Rossby speed (default: sphere option)
/
!-----------------------------------------------------------------------
&namtra_dmp ! tracer: T & S newtonian damping (default: OFF)
......@@ -1008,6 +1055,10 @@
rn_lf_cutoff = 5.0 ! cutoff frequency for low-pass filter [days]
rn_zdef_max = 0.9 ! maximum fractional e3t deformation
ln_vvl_dbg = .false. ! debug prints (T/F)
nn_vvl_interp = 2 ! interpolation method of scale factor anomalies at U/V/F points
! =0 linear even at the bottom (old)
! =1 linear with bottom correction
! =2 proportionnal to scale factors at rest ("qco" like)
/
!-----------------------------------------------------------------------
&namdyn_adv ! formulation of the momentum advection (default: NO selection)
......@@ -1016,7 +1067,7 @@
ln_dynadv_vec = .false. ! vector form - 2nd centered scheme
nn_dynkeg = 0 ! grad(KE) scheme: =0 C2 ; =1 Hollingsworth correction
ln_dynadv_cen2 = .false. ! flux form - 2nd order centered scheme
ln_dynadv_ubs = .false. ! flux form - 3rd order UBS scheme
ln_dynadv_up3 = .false. ! flux form - 3rd order UBS scheme
/
!-----------------------------------------------------------------------
&namdyn_vor ! Vorticity / Coriolis scheme (default: NO selection)
......@@ -1025,7 +1076,6 @@
ln_dynvor_ens = .false. ! enstrophy conserving scheme
ln_dynvor_mix = .false. ! mixed scheme
ln_dynvor_enT = .false. ! energy conserving scheme (T-point)
ln_dynvor_eeT = .false. ! energy conserving scheme (een using e3t)
ln_dynvor_een = .false. ! energy & enstrophy scheme
!
ln_dynvor_msk = .false. ! vorticity multiplied by fmask (=T) ==>>> PLEASE DO NOT ACTIVATE
......@@ -1038,7 +1088,6 @@
&namdyn_hpg ! Hydrostatic pressure gradient option (default: NO selection)
!-----------------------------------------------------------------------
ln_hpg_zco = .false. ! z-coordinate - full steps
ln_hpg_zps = .false. ! z-coordinate - partial steps (interpolation)
ln_hpg_sco = .false. ! s-coordinate (standard jacobian formulation)
ln_hpg_isf = .false. ! s-coordinate (sco ) adapted to isf
ln_hpg_djc = .false. ! s-coordinate (Density Jacobian with Cubic polynomial)
......@@ -1051,15 +1100,16 @@
!-----------------------------------------------------------------------
ln_dynspg_exp = .false. ! explicit free surface
ln_dynspg_ts = .false. ! split-explicit free surface
ln_bt_fw = .true. ! Forward integration of barotropic Eqs.
ln_bt_av = .true. ! Time filtering of barotropic variables
nn_bt_flt = 1 ! Time filter choice = 0 None
! ! = 1 Boxcar over nn_e sub-steps
! ! = 2 Boxcar over 2*nn_e " "
nn_bt_flt = 1 ! Add dissipation with either boxcar averaging or dissipative Forward-Backward
! ! = 0 None
! ! = 1 Boxcar over nn_e sub-steps
! ! = 2 Boxcar over 2*nn_e " "
! ! = 3 Temporal dissipation (Demange 2019)
rn_bt_alpha = 0. ! (if nn_bt_flt=3) ==> Temporal diffusion parameter (recommended values = 0.07-0.09)
!
ln_bt_auto = .true. ! Number of sub-step defined from:
rn_bt_cmax = 0.8 ! =T : the Maximum Courant Number allowed
nn_e = 30 ! =F : the number of sub-step in rn_Dt seconds
rn_bt_alpha = 0. ! Temporal diffusion parameter (if ln_bt_av=F)
nn_e = 30 ! =F : the number of sub-step in rn_Dt seconds
/
!-----------------------------------------------------------------------
&namdyn_ldf ! lateral diffusion on momentum (default: NO selection)
......@@ -1108,7 +1158,7 @@
sn_sal = 'dyna_grid_T' , 120. , 'vosaline' , .true. , .true. , 'yearly' , '' , '' , ''
sn_mld = 'dyna_grid_T' , 120. , 'somixhgt' , .true. , .true. , 'yearly' , '' , '' , ''
sn_emp = 'dyna_grid_T' , 120. , 'sowaflup' , .true. , .true. , 'yearly' , '' , '' , ''
sn_fmf = 'dyna_grid_T' , 120. , 'iowaflup' , .true. , .true. , 'yearly' , '' , '' , ''
sn_fwf = 'dyna_grid_T' , 120. , 'iowaflup' , .true. , .true. , 'yearly' , '' , '' , ''
sn_ice = 'dyna_grid_T' , 120. , 'soicecov' , .true. , .true. , 'yearly' , '' , '' , ''
sn_qsr = 'dyna_grid_T' , 120. , 'soshfldo' , .true. , .true. , 'yearly' , '' , '' , ''
sn_wnd = 'dyna_grid_T' , 120. , 'sowindsp' , .true. , .true. , 'yearly' , '' , '' , ''
......@@ -1195,7 +1245,7 @@
! ! = 2 first vertical derivative of mixing length bounded by 1
! ! = 3 as =2 with distinct dissipative an mixing length scale
ln_mxl0 = .true. ! surface mixing length scale = F(wind stress) (T) or not (F)
nn_mxlice = 2 ! type of scaling under sea-ice
nn_mxlice = 0 ! type of scaling under sea-ice
! ! = 0 no scaling under sea-ice
! ! = 1 scaling with constant sea-ice thickness
! ! = 2 scaling with mean sea-ice thickness ( only with SI3 sea-ice model )
......@@ -1241,7 +1291,7 @@
! ! = 1 roughness uses rn_hsri and is weigthed by 1-TANH(10*fr_i)
! ! = 2 roughness uses rn_hsri and is weighted by 1-fr_i
! ! = 3 roughness uses rn_hsri and is weighted by 1-MIN(1,4*fr_i)
nn_mxlice = 1 ! mixing under sea ice
nn_mxlice = 0 ! mixing under sea ice
! = 0 No scaling under sea-ice
! = 1 scaling with constant Ice-ocean roughness (rn_hsri)
! = 2 scaling with mean sea-ice thickness
......@@ -1254,14 +1304,10 @@
!-----------------------------------------------------------------------
&namzdf_osm ! OSM vertical diffusion (ln_zdfosm =T)
!-----------------------------------------------------------------------
ln_use_osm_la = .false. ! Use rn_osm_la
rn_osm_la = 0.3 ! Turbulent Langmuir number
rn_zdfosm_adjust_sd = 1.0 ! Stokes drift reduction factor
rn_osm_hblfrac = 0.1 ! specify top part of hbl for nn_osm_wave = 3 or 4
rn_osm_bl_thresh = 5.e-5 !Threshold buoyancy for deepening of OSBL base
nn_ave = 0 ! choice of horizontal averaging on avt, avmu, avmv
ln_dia_osm = .true. ! output OSMOSIS-OBL variables
rn_osm_hbl0 = 10. ! initial hbl value
ln_kpprimix = .true. ! Use KPP-style Ri# mixing below BL
rn_riinfty = 0.7 ! Highest local Ri_g permitting shear instability
rn_difri = 0.005 ! max Ri# diffusivity at Ri_g = 0 (m^2/s)
......@@ -1283,12 +1329,8 @@
&namosm_mle ! mixed layer eddy parametrisation (Fox-Kemper) (default: OFF)
!-----------------------------------------------------------------------
rn_osm_mle_ce = 0.06 ! magnitude of the MLE (typical value: 0.06 to 0.08)
nn_osm_mle = 0 ! MLE type: =0 standard Fox-Kemper ; =1 new formulation
rn_osm_mle_lf = 5.e+3 ! typical scale of mixed layer front (meters) (case rn_osm_mle=0)
rn_osm_mle_time = 43200. ! time scale for mixing momentum across the mixed layer (seconds) (case rn_osm_mle=0)
rn_osm_mle_lat = 20. ! reference latitude (degrees) of MLE coef. (case rn_mle=1)
rn_osm_mle_rho_c = 0.03 ! delta rho criterion used to calculate MLD for FK
rn_osm_mle_thresh = 0.0001 ! delta b criterion used for FK MLE criterion
rn_osm_mle_tau = 172800. ! time scale for FK-OSM (seconds) (case rn_osm_mle=0)
ln_osm_hmle_limit = .true. ! If true, limit hmle to rn_osm_hmle_limit*hbl
rn_osm_hmle_limit = 1.5
......@@ -1325,13 +1367,10 @@
!! *** Diagnostics namelists *** !!
!! !!
!! namtrd dynamics and/or tracer trends (default: OFF)
!! namhsb Heat and salt budgets (default: OFF)
!! namdiu Cool skin and warm layer models (default: OFF)
!! namdiu Cool skin and warm layer models (default: OFF)
!! namflo float parameters (default: OFF)
!! nam_diadct transports through some sections (default: OFF)
!! nam_dia25h 25h Mean Output (default: OFF)
!! namnc4 netcdf4 chunking and compression settings ("key_netcdf4")
!! namnc4 netcdf4 chunking and compression settings
!!======================================================================
!
!-----------------------------------------------------------------------
......@@ -1355,32 +1394,12 @@
!!gm ln_trdmld_instant = .false. ! flag to diagnose trends of instantantaneous or mean ML T/S
!!gm
!-----------------------------------------------------------------------
&namhsb ! Heat and salt budgets (default: OFF)
!-----------------------------------------------------------------------
ln_diahsb = .false. ! output the heat and salt budgets (T) or not (F)
/
!-----------------------------------------------------------------------
&namdiu ! Cool skin and warm layer models (default: OFF)
!-----------------------------------------------------------------------
ln_diurnal = .false. !
ln_diurnal_only = .false. !
/
!-----------------------------------------------------------------------
&namflo ! float parameters (default: OFF)
!-----------------------------------------------------------------------
ln_floats = .false. ! activate floats or not
jpnfl = 1 ! total number of floats during the run
jpnnewflo = 0 ! number of floats for the restart
ln_rstflo = .false. ! float restart (T) or not (F)
nn_writefl = 75 ! frequency of writing in float output file
nn_stockfl = 5475 ! frequency of creation of the float restart file
ln_argo = .false. ! Argo type floats (stay at the surface each 10 days)
ln_flork4 = .false. ! trajectories computed with a 4th order Runge-Kutta (T)
! ! or computed with Blanke' scheme (F)
ln_ariane = .true. ! Input with Ariane tool convention(T)
ln_flo_ascii= .true. ! Output with Ariane tool netcdf convention(F) or ascii file (T)
/
!-----------------------------------------------------------------------
&nam_diadct ! transports through some sections (default: OFF)
!-----------------------------------------------------------------------
ln_diadct = .false. ! Calculate transport thru sections or not
......@@ -1391,106 +1410,103 @@
! ! 0 < n : debug section number n
/
!-----------------------------------------------------------------------
&nam_dia25h ! 25h Mean Output (default: OFF)
!-----------------------------------------------------------------------
ln_dia25h = .false. ! Choose 25h mean output or not
/
!-----------------------------------------------------------------------
&namnc4 ! netcdf4 chunking and compression settings ("key_netcdf4")
&namnc4 ! netcdf4 chunking and compression settings
!-----------------------------------------------------------------------
nn_nchunks_i = 4 ! number of chunks in i-dimension
nn_nchunks_j = 4 ! number of chunks in j-dimension
nn_nchunks_k = 31 ! number of chunks in k-dimension
! ! setting nn_nchunks_k = jpk will give a chunk size of 1 in the vertical which
! ! is optimal for postprocessing which works exclusively with horizontal slabs
ln_nc4zip = .true. ! (T) use netcdf4 chunking and compression
! ! (F) ignore chunking information and produce netcdf3-compatible files
ln_nc4zip = .false. ! (T) use netcdf4 chunking and compression
! ! (F) ignore chunking and compression information (netcdf3 compatible file)
/
!!======================================================================
!! *** Observation & Assimilation *** !!
!! !!
!! namobs observation and model comparison (default: OFF)
!! namobs_dta observation and model comparison - external data (see: namobs)
!! nam_asminc assimilation increments ('key_asminc')
!!======================================================================
!
!-----------------------------------------------------------------------
&namobs ! observation usage switch (default: OFF)
!-----------------------------------------------------------------------
ln_diaobs = .false. ! Logical switch for the observation operator
!
ln_t3d = .false. ! Logical switch for T profile observations
ln_s3d = .false. ! Logical switch for S profile observations
ln_sla = .false. ! Logical switch for SLA observations
ln_sst = .false. ! Logical switch for SST observations
ln_sss = .false. ! Logical swithc for SSS observations
ln_sic = .false. ! Logical switch for Sea Ice observations
ln_vel3d = .false. ! Logical switch for velocity observations
ln_altbias = .false. ! Logical switch for altimeter bias correction
ln_sstbias = .false. ! Logical switch for SST bias correction
ln_nea = .false. ! Logical switch for rejection of observations near land
ln_grid_global = .true. ! Logical switch for global distribution of observations
ln_grid_search_lookup = .false. ! Logical switch for obs grid search w/lookup table
ln_ignmis = .true. ! Logical switch for ignoring missing files
ln_s_at_t = .false. ! Logical switch for computing model S at T obs if not there
ln_sstnight = .false. ! Logical switch for calculating night-time average for SST obs
ln_bound_reject = .false. ! Logical to remove obs near boundaries in LAMs.
ln_default_fp_indegs = .true. ! Logical: T=> averaging footprint is in degrees, F=> in metres
ln_sla_fp_indegs = .true. ! Logical for SLA: T=> averaging footprint is in degrees, F=> in metres
ln_sst_fp_indegs = .true. ! Logical for SST: T=> averaging footprint is in degrees, F=> in metres
ln_sss_fp_indegs = .true. ! Logical for SSS: T=> averaging footprint is in degrees, F=> in metres
ln_sic_fp_indegs = .true. ! Logical for SIC: T=> averaging footprint is in degrees, F=> in metres
! All of the *files* variables below are arrays. Use namelist_cfg to add more files
cn_profbfiles = 'profiles_01.nc' ! Profile feedback input observation file names
cn_slafbfiles = 'sla_01.nc' ! SLA feedback input observation file names
cn_sstfbfiles = 'sst_01.nc' ! SST feedback input observation file names
cn_sssfbfiles = 'sss_01.nc' ! SSS feedback input observation file names
cn_sicfbfiles = 'sic_01.nc' ! SIC feedback input observation file names
cn_velfbfiles = 'vel_01.nc' ! Velocity feedback input observation file names
cn_altbiasfile = 'altbias.nc' ! Altimeter bias input file name
cn_sstbiasfiles = 'sstbias.nc' ! SST bias input file name
cn_gridsearchfile ='gridsearch.nc' ! Grid search file name
rn_gridsearchres = 0.5 ! Grid search resolution
rn_default_avglamscl = 0. ! Default E/W diameter of observation footprint (metres/degrees)
rn_default_avgphiscl = 0. ! Default N/S diameter of observation footprint (metres/degrees)
rn_mdtcorr = 1.61 ! MDT correction
rn_mdtcutoff = 65.0 ! MDT cutoff for computed correction
rn_dobsini = 00010101.000000 ! Initial date in window YYYYMMDD.HHMMSS
rn_dobsend = 00010102.000000 ! Final date in window YYYYMMDD.HHMMSS
rn_sla_avglamscl = 0. ! E/W diameter of SLA observation footprint (metres/degrees)
rn_sla_avgphiscl = 0. ! N/S diameter of SLA observation footprint (metres/degrees)
rn_sst_avglamscl = 0. ! E/W diameter of SST observation footprint (metres/degrees)
rn_sst_avgphiscl = 0. ! N/S diameter of SST observation footprint (metres/degrees)
rn_sss_avglamscl = 0. ! E/W diameter of SSS observation footprint (metres/degrees)
rn_sss_avgphiscl = 0. ! N/S diameter of SSS observation footprint (metres/degrees)
rn_sic_avglamscl = 0. ! E/W diameter of SIC observation footprint (metres/degrees)
rn_sic_avgphiscl = 0. ! N/S diameter of SIC observation footprint (metres/degrees)
nn_1dint = 0 ! Type of vertical interpolation method
nn_2dint_default = 0 ! Default horizontal interpolation method
nn_2dint_sla = 0 ! Horizontal interpolation method for SLA
nn_2dint_sst = 0 ! Horizontal interpolation method for SST
nn_2dint_sss = 0 ! Horizontal interpolation method for SSS
nn_2dint_sic = 0 ! Horizontal interpolation method for SIC
nn_msshc = 0 ! MSSH correction scheme
nn_profdavtypes = -1 ! Profile daily average types - array
&namobs ! observation and model comparison (default: OFF)
!-----------------------------------------------------------------------
ln_diaobs = .false. ! Logical switch for the observation operator
nn_obsgroups = 0 ! Number of observation group namelists (namobs_dta) to read in
ln_grid_global = .true. ! Logical switch for global distribution of observations
ln_grid_search_lookup = .false. ! Logical switch for obs grid search w/lookup table
cn_gridsearchfile = 'grid_search' ! Grid search file name header
rn_gridsearchres = 0.5 ! Grid search resolution
dn_dobsini = 00010101.000000 ! Initial date in window YYYYMMDD.HHMMSS
dn_dobsend = 99991231.000000 ! Final date in window YYYYMMDD.HHMMSS
/
!-----------------------------------------------------------------------
&namobs_dta ! observation and model comparison - external data (see: namobs)
!-----------------------------------------------------------------------
cn_groupname = '' ! Name of obs group (output file will be cn_groupname//'fb_????.nc')
ln_enabled = .true. ! Logical switch for group being processed not ignored
ln_prof = .false. ! Logical switch for profile data
ln_surf = .false. ! Logical switch for surface data
cn_obsfiles = '' ! Observation file names
cn_obstypes = '' ! Observation types to read from files
ln_nea = .false. ! Logical switch for rejecting observations near land
ln_bound_reject = .false. ! Logical switch for rejecting obs near the boundary
ln_ignmis = .true. ! Logical switch for ignoring missing files
nn_2dint = 0 ! Type of horizontal interpolation method
! Relevant if ln_prof = .true.:
nn_1dint = 0 ! Type of vertical interpolation method
nn_profdavtypes = -1 ! Profile data types representing a daily average
ln_all_at_all = .false. ! Logical switch for computing all model variables at all obs points
! Relevant if ln_surf = .true.:
ln_fp_indegs = .true. ! Logical: T=> averaging footprint is in degrees, F=> in metres
rn_avglamscl = 0. ! E/W diameter of observation footprint (metres/degrees)
rn_avgphiscl = 0. ! N/S diameter of observation footprint (metres/degrees)
ln_night = .false. ! Logical switch for calculating night-time average for obs
ln_time_mean_bkg = .false. ! Logical switch for applying time mean of background (e.g. to remove tidal signal)
rn_time_mean_period = 24.8333 ! Meaning period in hours if ln_time_mean_bkg (default is AMM tidal period)
ln_obsbias = .false. ! Logical switch for bias correction
cn_obsbiasfiles = '' ! Bias input file names
cn_type_to_biascorrect = '' ! Observation type to bias correct
cn_obsbiasfile_varname = '' ! Bias variable name in input file
! Relevant if 'SLA' in cn_obstypes:
ln_altbias = .false. ! Logical switch for altimeter bias correction
cn_altbiasfile = '' ! Altimeter bias input file name
nn_msshc = 0 ! MSSH correction scheme
rn_mdtcorr = 1.61 ! MDT correction
rn_mdtcutoff = 65.0 ! MDT cutoff for computed correction
! Relevant if 'POTM', 'PSAL', 'SST', or 'SSS' in cn_obstypes:
ln_output_clim = .false. ! Logical switch to output climatological temperature/salinity (if ln_tradmp)
! Relevant if 'FBD' in cn_obstypes:
rn_radar_snow_penetr = 1.0 ! Snow depth penetration factor for radar ice freeboard conversion
/
!-----------------------------------------------------------------------
&nam_asminc ! assimilation increments ('key_asminc')
!-----------------------------------------------------------------------
ln_bkgwri = .false. ! Logical switch for writing out background state
ln_trainc = .false. ! Logical switch for applying tracer increments
ln_dyninc = .false. ! Logical switch for applying velocity increments
ln_sshinc = .false. ! Logical switch for applying SSH increments
ln_asmdin = .false. ! Logical switch for Direct Initialization (DI)
ln_asmiau = .false. ! Logical switch for Incremental Analysis Updating (IAU)
nitbkg = 0 ! Timestep of background in [0,nitend-nit000-1]
nitdin = 0 ! Timestep of background for DI in [0,nitend-nit000-1]
nitiaustr = 1 ! Timestep of start of IAU interval in [0,nitend-nit000-1]
nitiaufin = 15 ! Timestep of end of IAU interval in [0,nitend-nit000-1]
niaufn = 0 ! Type of IAU weighting function
ln_salfix = .false. ! Logical switch for ensuring that the sa > salfixmin
salfixmin = -9999 ! Minimum salinity after applying the increments
nn_divdmp = 0 ! Number of iterations of divergence damping operator
ln_bkgwri = .false. ! Logical switch for writing out background state
ln_trainc = .false. ! Logical switch for applying tracer increments
ln_dyninc = .false. ! Logical switch for applying velocity increments
ln_sshinc = .false. ! Logical switch for applying SSH increments
ln_sicinc = .false. ! Logical switch for applying sea ice concentration increments
ln_sitinc = .false. ! Logical switch for applying sea ice thickness increments
ln_asmdin = .false. ! Logical switch for Direct Initialization (DI)
ln_asmiau = .false. ! Logical switch for Incremental Analysis Updating (IAU)
nn_itbkg = 0 ! Timestep of background in [0,nitend-nit000-1]
nn_itdin = 0 ! Timestep of background for DI in [0,nitend-nit000-1]
nn_itiaustr = 1 ! Timestep of start of IAU interval in [0,nitend-nit000-1]
nn_itiaufin = 15 ! Timestep of end of IAU interval in [0,nitend-nit000-1]
nn_iaufn = 0 ! Type of IAU weighting function
ln_temnofreeze=.false. ! Don't allow the temperature to drop below freezing
nn_divdmp = 0 ! Number of iterations of divergence damping operator
ln_bv_check = .false. ! Don't apply T/S increments where Brunt-Vaisala (N2) checks fail
rn_bv_thres = 0.0 ! Brunt-Vaisala threshold for applying T/S increments
rn_zmin_bv = 400.0 ! Min depth to verify Brunt-Vaisala (N2) values
rn_zmax_bv = 1500.0 ! Max depth to verify Brunt-Vaisala (N2) values
ln_salfix = .false. ! Logical switch for ensuring that the sa > salfixmin
rn_salfixmin = -9999.0 ! Minimum salinity after applying the increments
rn_zhi_damin = 0.45 ! Ice thickness for new sea ice from DA increment
rn_ai_damin = 0.15 ! Minimum total ice concentration to apply ice thickness increments
rn_acat_damin = 0.01 ! Minimum ice concentration at category level to apply ice thickness increments
/
!!======================================================================
......@@ -1507,21 +1523,23 @@
ln_listonly = .false. ! do nothing else than listing the best domain decompositions (with land domains suppression)
! ! if T: the largest number of cores tested is defined by max(mppsize, jpni*jpnj)
ln_nnogather = .true. ! activate code to avoid mpi_allgather use at the northfold
ln_mppdelay = .true. ! activate delayed global communications to go faster
jpni = 0 ! number of processors following i (set automatically if < 1), see also ln_listonly = T
jpnj = 0 ! number of processors following j (set automatically if < 1), see also ln_listonly = T
nn_hls = 1 ! halo width (applies to both rows and columns)
nn_hls = 2 ! halo width (applies to both rows and columns)
nn_comm = 1 ! comm choice
/
!-----------------------------------------------------------------------
&namctl ! Control prints (default: OFF)
!-----------------------------------------------------------------------
sn_cfctl%l_runstat = .TRUE. ! switches and which areas produce reports with the proc integer settings.
sn_cfctl%l_runstat = .FALSE. ! switches and which areas produce reports with the proc integer settings.
sn_cfctl%l_trcstat = .FALSE. ! The default settings for the proc integers should ensure
sn_cfctl%l_oceout = .FALSE. ! that all areas report.
sn_cfctl%l_layout = .FALSE. !
sn_cfctl%l_prtctl = .FALSE. !
sn_cfctl%l_prttrc = .FALSE. !
sn_cfctl%l_oasout = .FALSE. !
sn_cfctl%l_obsstat = .FALSE. !
sn_cfctl%procmin = 0 ! Minimum area number for reporting [default:0]
sn_cfctl%procmax = 1000000 ! Maximum area number for reporting [default:1000000]
sn_cfctl%procincr = 1 ! Increment for optional subsetting of areas [default:1]
......
cfgs/SHARED/namelist_sediment_ref
View file @ dd59ced6
......@@ -13,17 +13,17 @@
!-----------------------------------------------------------------------
ln_sed_2way = .false. ! 2 way coupling with pisces
nrosorder = 3 ! Order of the rosenbrock methode (3,4)
rosatol = 1.E-4 ! Tolerance for the absolute error
rosatol = 1.E-3 ! Tolerance for the absolute error
rosrtol = 1.E-4 ! Tolerance for the relative error
/
!-----------------------------------------------------------------------
&nam_geom ! Characteristics of the sediment columns
!-----------------------------------------------------------------------
jpksed = 18 ! Number of vertical layers
jpksed = 25 ! Number of vertical layers
sedzmin = 0.1 ! Minimum vertical spacing
sedhmax = 15.0 ! Maximum depth of the sediment
sedkth = 9.0 ! Default parameters
sedacr = 2.0 ! Default parameters
sedhmax = 50.0 ! Maximum depth of the sediment
sedkth = 14.0 ! Default parameters
sedacr = 6.0 ! Default parameters
porsurf = 0.9 ! Sediment porosity at the surface
porinf = 0.75 ! Sediment porosity at infinite depth
rhox = 0.25 ! Length scale of porosity variation (cm)
......@@ -36,12 +36,15 @@
! ! ! ! !
sedsol(1) = 'SedFeO ' , 'Fe(OH)3 Concentration ', '%'
sedsol(2) = 'SedFeS ' , 'FeS Concentration ', '%'
sedsol(3) = 'SedPOC ' , 'POC Concentration ', '%'
sedsol(4) = 'SedPOS ' , 'Semi-ref POC Concentration ', '%'
sedsol(5) = 'SedPOR ' , 'Refractory POC Concentration ', '%'
sedsol(6) = 'SedCaCO3' , 'Calcite Concentration ', '%'
sedsol(7) = 'SedBSi ' , 'Biogenic Silicate Concentration ', '%'
sedsol(8) = 'SedClay ' , 'Clay Concentration ', '%'
sedsol(3) = 'SedCaCO3' , 'Calcite Concentration ', '%'
sedsol(4) = 'SedBSi ' , 'Biogenic Silicate Concentration ', '%'
sedsol(5) = 'SedClay ' , 'Clay Concentration ', '%'
sedsol(6) = 'SedPOC1 ' , 'POC age Concentration ', '%'
sedsol(7) = 'SedPOC2 ' , 'POC age Concentration ', '%'
sedsol(8) = 'SedPOC3 ' , 'POC age Concentration ', '%'
sedsol(9) = 'SedPOC4 ' , 'POC age Concentration ', '%'
sedsol(10) = 'SedPOC5 ' , 'POC age Concentration ', '%'
sedsol(11) = 'SedPOC6 ' , 'POC age Concentration ', '%'
sedwat(1) = 'SedO2 ' , 'Dissolved Oxygen Concentration ', 'mol/L'
sedwat(2) = 'SedNO3 ' , 'Nitrates Concentration ', 'mol/L'
sedwat(3) = 'SedPO4 ' , 'Phosphate Concentration ', 'mol/L'
......@@ -58,9 +61,6 @@
&nam_diased ! Diagnostic arrays
!-----------------------------------------------------------------------
!
seddiag3d(1) = 'SedpH ' , 'pH ', '- '
seddiag3d(2) = 'SedCO3por ' , 'Dissolved CO3 concentration ', 'mol/L'
seddiag3d(3) = 'SaturCO3 ' , 'CO3 saturation ', '-'
seddiag2d(1) = 'FlxO2 ' , 'Dissolved Oxygen Flux ', 'mol/L'
seddiag2d(2) = 'FlxNO3 ' , 'Nitrates flux ', 'mol/cm2/s'
seddiag2d(3) = 'FlxPO4 ' , 'Phosphate flux ', 'mol/cm2/s'
......@@ -74,21 +74,24 @@
seddiag2d(11) = 'FlxSi ' , 'Silicate flux ', 'mol/cm2/s'
seddiag2d(12) = 'FlxFeO ' , 'FeO burial flux ', 'mol/cm2/s'
seddiag2d(13) = 'FlxFeS ' , 'FeS burial flux ', 'mol/cm2/s'
seddiag2d(14) = 'FlxPOC ' , 'POC burial flux ', 'mol/cm2/s'
seddiag2d(15) = 'FlxPOS ' , 'POS burial flux ', 'mol/cm2/s'
seddiag2d(16) = 'FlxPOR ' , 'POR burial flux ', 'mol/cm2/s'
seddiag2d(17) = 'FlxCaCO3 ' , 'Calcite burial flux ', 'mol/cm2/s'
seddiag2d(18) = 'FlxBSi ' , 'BSi burial flux ', 'mol/cm2/s'
seddiag2d(19) = 'FlxClay ' , 'Clay burial flux ', 'mol/cm2/s'
seddiag2d(20) = 'Flxtot ' , 'Total burial flux ', 'mol/cm2/s'
seddiag2d(21) = 'dzdep ' , 'Sedimentation rate ', 'cm/s'
seddiag2d(22) = 'Rstepros ' , 'Number of iterations ', '-'
seddiag2d(14) = 'FlxCaCO3 ' , 'Calcite burial flux ', 'mol/cm2/s'
seddiag2d(15) = 'FlxBSi ' , 'BSi burial flux ', 'mol/cm2/s'
seddiag2d(16) = 'FlxClay ' , 'Clay burial flux ', 'mol/cm2/s'
seddiag2d(17) = 'FlxPOC1 ' , 'POCT burial flux ', 'mol/cm2/s'
seddiag2d(18) = 'FlxPOC2 ' , 'POCT burial flux ', 'mol/cm2/s'
seddiag2d(19) = 'FlxPOC3 ' , 'POCT burial flux ', 'mol/cm2/s'
seddiag2d(20) = 'FlxPOC4 ' , 'POCT burial flux ', 'mol/cm2/s'
seddiag2d(21) = 'FlxPOC5 ' , 'POCT burial flux ', 'mol/cm2/s'
seddiag2d(22) = 'FlxPOC6 ' , 'POCT burial flux ', 'mol/cm2/s'
seddiag2d(23) = 'Flxtot ' , 'Total burial flux ', 'mol/cm2/s'
seddiag2d(24) = 'dzdep ' , 'Sedimentation rate ', 'cm/s'
seddiag2d(25) = 'Rstepros ' , 'Number of iterations ', '-'
/
!-----------------------------------------------------------------------
&nam_inorg ! Inorganic chemistry in sediments (CacO3, Si)
!-----------------------------------------------------------------------
rcopal = 1.25 ! Reactivity for clay [l.mol-1.an-1]
rccal = 0.1 ! Dissolution rate of calcite [in yr-1]
rcopal = 2.0 ! Reactivity for clay [l.mol-1.an-1]
rccal = 1.0 ! Dissolution rate of calcite [in yr-1]
rcligc = 0.1 ! Degradation rate of ligands [in yr-1]
ratligc = 1.E-4 ! L/C ratio in POC
/
......@@ -99,37 +102,44 @@
redNo3 = 16. ! Redfield coef for Nitrate
redPo4 = 1. ! Redfield coef for Phosphate
redC = 117. ! Redfield coef for Carbon
redfep = 0.05 ! Ration of Fe bound P
rcorgl = 10. ! Reactivity for labile POC [an-1]
rcorgs = 0.1 ! Reactivity for semi-refractory POC [an-1]
rcorgr = 1.E-4 ! Reactivity for refractory POC [an-1]
rcnh4 = 1E7 ! Reactivity for O2/NH4 [l.mol-1.an-1]
rch2s = 1E8 ! Reactivity for O2/H2S [l.mol-1.an-1]
redfep = 0.01 ! Ration of Fe bound P
rcorg1 = 8.00 ! Reactivity for labile POC [an-1]
rcorg2 = 5.20E-1 ! Reactivity for labile POC [an-1]
rcorg3 = 3.5E-2 ! Reactivity for labile POC [an-1]
rcorg4 = 2.30E-3 ! Reactivity for labile POC [an-1]
rcorg5 = 1.5E-4 ! Reactivity for labile POC [an-1]
rcorg6 = 5.7E-6 ! Reactivity for labile POC [an-1]
rcnh4 = 5E7 ! Reactivity for O2/NH4 [l.mol-1.an-1]
rch2s = 3E8 ! Reactivity for O2/H2S [l.mol-1.an-1]
rcfe2 = 5E8 ! Reactivity for O2/Fe2+ [l.mol-1.an-1]
rcfeh2s = 1E4 ! Reactivity for FEOH/H2S [l.mol-1.an-1]
rcfeso = 2E6 ! Reactivity for FES/O2 [l.mol-1.an-1]
rcfesp = 1E-4 ! Precipitation of FeS [mol.l-1.an-1]
rcfesp = 1E-3 ! Precipitation of FeS [mol.l-1.an-1]
rcfesd = 1.E-3 ! Dissolution of FeS [an-1]
rcapat = 0.35 ! Formation rate of apatite [an-1]
xksedo2 = 1.E-6 ! Half-saturation constant for oxic remin [mol/l]
xksedno3 = 5.E-6 ! Half-saturation constant for denitrification [mol/l]
xksedfeo = 0.006 ! Half-saturation constant for iron remin [%]
xksedso4 = 5E-4 ! Half-saturation constant for SO4 remin [mol/l]
xksedno3 = 3.E-6 ! Half-saturation constant for denitrification [mol/l]
xksedfeo = 0.003 ! Half-saturation constant for iron remin [%]
xksedso4 = 1.6E-3 ! Half-saturation constant for SO4 remin [mol/l]
/
!-----------------------------------------------------------------------
&nam_btb ! parameters for bioturbation and bioirrigation
!-----------------------------------------------------------------------
dbiot = 8. ! Bioturbation coefficient (in cm2/yr)
dbiot = 10. ! Bioturbation coefficient (in cm2/yr)
ln_btbz = .true. ! Depth varying bioturbation
dbtbzsc = 5.0 ! coefficient for btb attenuation. If no variation, depth of the mixed layer
dbtbzsc = 4.0 ! coefficient for btb attenuation. If no variation, depth of the mixed layer
adsnh4 = 4.16 ! Adsorption coefficient of NH4
adsfe2 = 697.0 ! Adsorption coefficient of Fe2
ln_irrig = .true. ! Bioirrigation in sediment
xirrzsc = 2.0 ! Vertical scale of the attentuation of bioirrigation [cm]
xirrzsc = 1.8 ! Vertical scale of the attentuation of bioirrigation [cm]
/
!-----------------------------------------------------------------------
&nam_rst ! parameters for restarting the sediment module
!-----------------------------------------------------------------------
ln_rst_sed = .false. ! restart flag
nn_rstsed = 0 ! restart control = 0 initial time step is not compared to the restart file value
! = 1 do not use the value in the restart file
! = 2 calendar parameters read in the restart file
cn_sedrst_in = "restart_sed" ! name of the input restart file name of the sediment module
cn_sedrst_indir = "." ! directory from which to read input sediment restarts
cn_sedrst_out = "restart_sed" ! suffix of pass. [sediment] restart name (output)
......
cfgs/SHARED/namelist_top_ref
View file @ dd59ced6
......@@ -13,7 +13,6 @@
!-----------------------------------------------------------------------
&namtrc_run ! run information
!-----------------------------------------------------------------------
ln_top_euler = .false. ! use Euler time-stepping for TOP
ln_rsttr = .false. ! start from a restart file (T) or not (F)
nn_rsttr = 0 ! restart control = 0 initial time step is not compared to the restart file value
! = 1 do not use the value in the restart file
......@@ -73,6 +72,7 @@
ln_trcadv_fct = .false. ! FCT scheme
nn_fct_h = 2 ! =2/4, horizontal 2nd / 4th order
nn_fct_v = 2 ! =2/4, vertical 2nd / COMPACT 4th order
nn_fct_imp = 1 ! =1/2, optimized / accurate treatment of implicit part
ln_trcadv_mus = .false. ! MUSCL scheme
ln_mus_ups = .false. ! use upstream scheme near river mouths
ln_trcadv_ubs = .false. ! UBS scheme
......@@ -97,7 +97,13 @@
!-----------------------------------------------------------------------
&namtrc_snk ! Sedimentation of particles
!-----------------------------------------------------------------------
nitermax = 2 ! number of iterations for sedimentation
ln_sink_mus = .true. ! MUSCL sinking scheme
nitermax = 2 ! number of iterations for sedimentation
ln_sink_slg = .false. ! Semi-Lagrangian sinking scheme
nn_sink_lbc = 0 ! Type of boundary conditions
! ! 0 - Strictly monotonic conditions ( default )
! ! 1 - Dirichlet condition : linear continuation
! ! 2 - Neumann condition
/
!-----------------------------------------------------------------------
&namtrc_dcy ! Diurnal cycle
......@@ -111,7 +117,7 @@
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
sn_par = 'par.orca' , 24 , 'fr_par' , .true. , .true. , 'yearly' , '' , '' , ''
cn_dir = './' ! root directory for the location of the dynamical files
ln_varpar = .true. ! Read PAR from file
ln_varpar = .false. ! Read PAR from file
parlux = 0.43 ! Fraction of shortwave as PAR
light_loc = 'center' ! Light location in the water cell ('center', 'integral')
/
......@@ -133,19 +139,29 @@
/
!-----------------------------------------------------------------------
&namtrc_trd ! diagnostics on tracer trends ('key_trdtrc')
! or mixed-layer trends ('key_trdmld_trc')
! or mixed-layer trends ('key_trdmxl_trc')
!----------------------------------------------------------------------
nn_trd_trc = 5475 ! time step frequency and tracers trends
nn_ctls_trc = 0 ! control surface type in mixed-layer trends (0,1 or n<jpk)
rn_ucf_trc = 1 ! unit conversion factor (=1 -> /seconds ; =86400. -> /day)
ln_trdmld_trc_restart = .false. ! restart for ML diagnostics
ln_trdmld_trc_instant = .true. ! flag to diagnose trends of instantantaneous or mean ML T/S
ln_trdmxl_trc_restart = .false. ! restart for ML diagnostics
ln_trdmxl_trc_instant = .true. ! flag to diagnose trends of instantantaneous or mean ML T/S
cn_trdrst_trc_in = "restart_trd_trc" ! suffix of tracer trends restart name (input)
cn_trdrst_trc_out = "restart_trd_trc" ! suffix of tracer trends restart name (output)
ln_trdtrc( 1) = .true.
ln_trdtrc( 2) = .true.
ln_trdtrc(23) = .true.
/
!----------------------------------------------------------------------
&namtrc_bc ! data for boundary conditions
!----------------------------------------------------------------------
! Surface and coastal input data must be specified individually for each tracer.
! Lateral open boundary inputs are specified for each BDY segment and related inputfiles
! must contain data for the variables with active open boundary (set through &namtrc).
! By default, variable names of BDY inputfiles are the same as in &namtrc, but using
! cn_tronam it is possible to specify alternative variable names to match with inputfiles.
! ! file name ! freq ! variable ! time interp. ! clim !'yearly' ! weights ! rotation | land/sea
! sn_trcobc(1) = 'bdy_dta_trc_North_y1980', -1 , 'dummy' , .false. , .true. ,'yearly' , '', '', ''
!-----------------------------------------------------------------------
cn_dir_sbc = './' ! root directory for the location of SURFACE data files
cn_dir_cbc = './' ! root directory for the location of COASTAL data files
......@@ -153,6 +169,7 @@
ln_rnf_ctl = .false. ! Remove runoff dilution on tracers with absent river load
rn_sbc_time = 86400. ! Time scaling factor for SBC data (seconds in a day)
rn_cbc_time = 86400. ! Time scaling factor for CBC data (seconds in a day)
! cn_tronam(1) = 'var1' ! Tracer-name to variable-name translation
/
!----------------------------------------------------------------------
&namtrc_bdy ! Setup of tracer boundary conditions
......@@ -164,6 +181,8 @@
! = 0 NO damping of tracers at open boudaries
! = 1 Only for tracers forced with external data
! = 2 Damping applied to all tracers
ln_zintobc = .false. ! T if a vertical interpolation is required. Variables gdep[t] and e3[t] must exist in the file
! automatically defined to T if the number of vertical levels in bdy dta /= jpk
/
!-----------------------------------------------------------------------
&namtrc_ais ! Representation of Antarctic Ice Sheet tracers supply
......
cfgs/SPITZ12/EXPREF/context_nemo.xml
View file @ dd59ced6
......@@ -4,7 +4,7 @@
==============================================================================================
-->
<context id="nemo">
<!-- $id$ -->
<variable_definition>
<!-- Year/Month/Day of time origin for NetCDF files; defaults to 1800-01-01 -->
<variable id="ref_year" type="int"> 1900 </variable>
......@@ -26,7 +26,6 @@
<file_definition src="./file_def_nemo-oce.xml"/> <!-- NEMO ocean dynamics -->
<file_definition src="./file_def_nemo-ice.xml"/> <!-- NEMO sea-ice model -->
<!-- Axis definition -->
<axis_definition src="./axis_def_nemo.xml"/>
......
cfgs/SPITZ12/EXPREF/file_def_nemo-ice.xml
View file @ dd59ced6
<?xml version="1.0"?>
<!-- $id$ -->
<!--
============================================================================================================
......@@ -11,8 +10,8 @@
<file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="1mo" min_digits="4">
<file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE."> <!-- 5d files -->
<file id="file21" name_suffix="_icemod" description="ice variables" enabled=".true." >
<file_group id="ice_5d" output_freq="5d" output_level="10" enabled=".TRUE."> <!-- 5d files -->
<file id="file101" name_suffix="_icemod" description="ice variables" enabled=".true." >
<!-- ice mask -->
<field field_ref="icemask" name="simsk" />
......@@ -89,7 +88,7 @@
</file>
<file id="file22" name_suffix="_SBC_scalar" description="scalar variables" enabled=".true." >
<file id="file102" name_suffix="_SBC_scalar" description="scalar variables" enabled=".true." >
<!-- global contents -->
<field field_ref="ibgvol_tot" name="ibgvol_tot" />
<field field_ref="sbgvol_tot" name="sbgvol_tot" />
......@@ -116,21 +115,21 @@
</file_group>
<file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files -->
<file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->
<file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
<file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
<file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
<file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
<file_group id="1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files -->
<file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
<file_group id="ice_1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="ice_1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files -->
<file_group id="ice_2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="ice_3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="ice_4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="ice_6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="ice_1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->
<file_group id="ice_2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
<file_group id="ice_3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
<file_group id="ice_4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
<file_group id="ice_6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
<file_group id="ice_1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files -->
<file_group id="ice_2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="ice_5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="ice_10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
</file_definition>
cfgs/SPITZ12/EXPREF/file_def_nemo-oce.xml
View file @ dd59ced6
......@@ -10,8 +10,8 @@
<file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="1mo" min_digits="4">
<file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE."> <!-- 5d files -->
<file id="file11" name_suffix="_grid_T" description="ocean T grid variables" >
<file_group id="oce_5d" output_freq="5d" output_level="10" enabled=".TRUE."> <!-- 5d files -->
<file id="file1" name_suffix="_grid_T" description="ocean T grid variables" >
<field field_ref="e3t" />
<field field_ref="toce" name="thetao" operation="instant" freq_op="5d" > @toce_e3t / @e3t </field>
<field field_ref="soce" name="so" operation="instant" freq_op="5d" > @soce_e3t / @e3t </field>
......@@ -34,17 +34,18 @@
<field field_ref="qt_oce" name="qt_oce" />
<field field_ref="saltflx" name="sfx" />
<field field_ref="taum" name="taum" />
<field field_ref="utau" name="tauuo" />
<field field_ref="vtau" name="tauvo" />
<field field_ref="wspd" name="windsp" />
<field field_ref="precip" name="precip" />
<!-- ice and snow -->
<field field_ref="snowpre" />
</file>
<file id="file12" name_suffix="_grid_U" description="ocean U grid variables" >
<file id="file2" name_suffix="_grid_U" description="ocean U grid variables" >
<field field_ref="e3u" />
<field field_ref="ssu" name="uos" />
<field field_ref="uoce" name="uo" operation="instant" freq_op="5d" > @uoce_e3u / @e3u </field>
<field field_ref="utau" name="tauuo" />
<field field_ref="uocetr_eff" name="uocetr_eff" />
<!-- available with diaar5 -->
<field field_ref="u_masstr" name="vozomatr" />
......@@ -52,11 +53,10 @@
<field field_ref="u_salttr" name="sozosatr" />
</file>
<file id="file13" name_suffix="_grid_V" description="ocean V grid variables" >
<file id="file3" name_suffix="_grid_V" description="ocean V grid variables" >
<field field_ref="e3v" />
<field field_ref="ssv" name="vos" />
<field field_ref="voce" name="vo" operation="instant" freq_op="5d" > @voce_e3v / @e3v </field>
<field field_ref="vtau" name="tauvo" />
<field field_ref="vocetr_eff" name="vocetr_eff" />
<!-- available with diaar5 -->
<field field_ref="v_masstr" name="vomematr" />
......@@ -64,7 +64,7 @@
<field field_ref="v_salttr" name="somesatr" />
</file>
<file id="file14" name_suffix="_grid_W" description="ocean W grid variables" >
<file id="file4" name_suffix="_grid_W" description="ocean W grid variables" >
<field field_ref="e3w" />
<field field_ref="woce" name="wo" />
<field field_ref="avt" name="difvho" />
......@@ -78,7 +78,7 @@
<field field_ref="av_ratio" name="av_ratio" />
</file>
<file id="file15" name_suffix="_scalar" description="scalar variables" >
<file id="file5" name_suffix="_scalar" description="scalar variables" >
<!-- global drifts (conservation checks) -->
<field field_ref="bgtemper" name="bgtemper" />
<field field_ref="bgsaline" name="bgsaline" />
......@@ -98,25 +98,25 @@
</file_group>
<file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files -->
<file_group id="oce_1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files -->
</file_group>
<file_group id="1y" output_freq="1y" output_level="10" enabled=".TRUE."> <!-- real yearly files -->
<file_group id="oce_1y" output_freq="1y" output_level="10" enabled=".TRUE."> <!-- real yearly files -->
</file_group>
<file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
<file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
<file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
<file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
<file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
<file_group id="oce_1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="oce_2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="oce_3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="oce_4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="oce_6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="oce_2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
<file_group id="oce_3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
<file_group id="oce_4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
<file_group id="oce_6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
<file_group id="oce_2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="oce_5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="oce_10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
</file_definition>
......
cfgs/SPITZ12/EXPREF/namelist_cfg
View file @ dd59ced6
......@@ -10,10 +10,7 @@
!! namcfg parameters of the configuration (default: user defined GYRE)
!! namwad Wetting and drying (default: OFF)
!! namtsd data: temperature & salinity (default: OFF)
!! namcrs coarsened grid (for outputs and/or TOP) (ln_crs =T)
!! namc1d 1D configuration options (ln_c1d =T)
!! namc1d_dyndmp 1D newtonian damping applied on currents (ln_c1d =T)
!! namc1d_uvd 1D data (currents) (ln_c1d =T)
!!======================================================================
!
!-----------------------------------------------------------------------
......@@ -94,8 +91,8 @@
! ! bulk algorithm :
ln_NCAR = .true. ! "NCAR" algorithm (Large and Yeager 2008)
!
ln_Cd_L12 = .false. ! air-ice drags = F(ice concentration) (Lupkes et al. 2012)
ln_Cd_L15 = .true. ! air-ice drags = F(ice concentration) (Lupkes et al. 2015)
ln_Cx_ice_LU12 = .false. ! air-ice drags = F(ice concentration) (Lupkes et al. 2012)
ln_Cx_ice_LG15 = .true. ! air-ice drags = F(ice concentration) (Lupkes et al. 2015)
!
cn_dir = './' ! root directory for the bulk data location
!___________!_________________________!___________________!___________!_____________!________!___________!______________________________________!__________!_______________!
......@@ -290,12 +287,12 @@
!-----------------------------------------------------------------------
&namdyn_adv ! formulation of the momentum advection (default: NO selection)
!-----------------------------------------------------------------------
ln_dynadv_ubs = .true. ! flux form - 3rd order UBS scheme
ln_dynadv_up3 = .true. ! flux form - 3rd order UBS scheme
/
!-----------------------------------------------------------------------
&namdyn_vor ! Vorticity / Coriolis scheme (default: NO selection)
!-----------------------------------------------------------------------
ln_dynvor_eeT = .true. ! energy conserving scheme (een using e3t)
ln_dynvor_een = .true. ! energy & enstrophy scheme
/
!-----------------------------------------------------------------------
&namdyn_hpg ! Hydrostatic pressure gradient option (default: NO selection)
......@@ -306,7 +303,6 @@
&namdyn_spg ! surface pressure gradient (default: NO selection)
!-----------------------------------------------------------------------
ln_dynspg_ts = .true. ! split-explicit free surface
ln_bt_fw = .false. ! Forward integration of barotropic Eqs.
/
!-----------------------------------------------------------------------
&namdyn_ldf ! lateral diffusion on momentum (default: NO selection)
......@@ -362,22 +358,14 @@
!! *** Diagnostics namelists *** !!
!! !!
!! namtrd dynamics and/or tracer trends (default: OFF)
!! namhsb Heat and salt budgets (default: OFF)
!! namdiu Cool skin and warm layer models (default: OFF)
!! namdiu Cool skin and warm layer models (default: OFF)
!! namflo float parameters (default: OFF)
!! nam_diadct transports through some sections (default: OFF)
!! nam_dia25h 25h Mean Output (default: OFF)
!! namnc4 netcdf4 chunking and compression settings ("key_netcdf4")
!! namnc4 netcdf4 chunking and compression settings
!!======================================================================
!
!-----------------------------------------------------------------------
&namhsb ! Heat and salt budgets (default: OFF)
!-----------------------------------------------------------------------
ln_diahsb = .false. ! check the heat and salt budgets (T) or not (F)
/
!-----------------------------------------------------------------------
&namnc4 ! netcdf4 chunking and compression settings ("key_netcdf4")
&namnc4 ! netcdf4 chunking and compression settings
!-----------------------------------------------------------------------
nn_nchunks_k = 75 ! number of chunks in k-dimension
! ! setting nn_nchunks_k = jpk will give a chunk size of 1 in the vertical which
......
cfgs/SPITZ12/cpp_SPITZ12.fcm
View file @ dd59ced6
bld::tool::fppkeys key_xios key_si3 key_qco
bld::tool::fppkeys key_xios key_si3 key_qco key_vco_3d
cfgs/WED025/EXPREF/context_nemo.xml
View file @ dd59ced6
......@@ -4,7 +4,7 @@
==============================================================================================
-->
<context id="nemo">
<!-- $id$ -->
<variable_definition>
<!-- Year of time origin for NetCDF files; defaults to 1800 -->
<variable id="ref_year" type="int" > 1800 </variable>
......@@ -33,7 +33,6 @@
<axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" />
<axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" />
<axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" />
<axis id="nfloat" long_name="Float number" unit="-" />
<axis id="icbcla" long_name="Iceberg class" unit="1" />
<axis id="ncatice" long_name="Ice category" unit="1" />
<axis id="iax_20C" long_name="20 degC isotherm" unit="degC" />
......
cfgs/WED025/EXPREF/file_def_nemo-ice.xml
View file @ dd59ced6
<?xml version="1.0"?>
<!-- $id$ -->
<!--
============================================================================================================
......@@ -11,8 +10,8 @@
<file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="1mo" min_digits="4">
<file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE."> <!-- 5d files -->
<file id="file21" name_suffix="_icemod" description="ice variables" enabled=".true." >
<file_group id="ice_5d" output_freq="5d" output_level="10" enabled=".TRUE."> <!-- 5d files -->
<file id="file101" name_suffix="_icemod" description="ice variables" enabled=".true." >
<!-- ice mask -->
<field field_ref="icemask" name="simsk" />
......@@ -78,21 +77,21 @@
</file_group>
<file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files -->
<file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->
<file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
<file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
<file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
<file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
<file_group id="1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files -->
<file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
<file_group id="ice_1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="ice_1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files -->
<file_group id="ice_2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="ice_3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="ice_4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="ice_6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="ice_1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->
<file_group id="ice_2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
<file_group id="ice_3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
<file_group id="ice_4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
<file_group id="ice_6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
<file_group id="ice_1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files -->
<file_group id="ice_2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="ice_5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="ice_10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
</file_definition>
cfgs/WED025/EXPREF/file_def_nemo-oce.xml
View file @ dd59ced6
......@@ -10,8 +10,8 @@
<file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="5d" min_digits="4">
<file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE."> <!-- 5d files -->
<file id="file11" name_suffix="_grid_T" description="ocean T grid variables" >
<file_group id="oce_5d" output_freq="5d" output_level="10" enabled=".TRUE."> <!-- 5d files -->
<file id="file1" name_suffix="_grid_T" description="ocean T grid variables" >
<field field_ref="e3t" />
<field field_ref="toce" name="thetao" operation="instant" freq_op="5d" > @toce_e3t / @e3t </field>
<field field_ref="soce" name="so" operation="instant" freq_op="5d" > @soce_e3t / @e3t </field>
......@@ -31,6 +31,8 @@
<field field_ref="qt_oce" name="qt_oce" />
<field field_ref="saltflx" name="sfx" />
<field field_ref="taum" name="taum" />
<field field_ref="utau" name="tauuo" />
<field field_ref="vtau" name="tauvo" />
<field field_ref="wspd" name="windsp" />
<field field_ref="precip" name="precip" />
<field field_ref="snowpre" />
......@@ -63,21 +65,19 @@
</file>
<file id="file12" name_suffix="_grid_U" description="ocean U grid variables" >
<file id="file2" name_suffix="_grid_U" description="ocean U grid variables" >
<field field_ref="e3u" />
<field field_ref="ssu" name="uos" />
<field field_ref="uoce" name="uo" operation="instant" freq_op="5d" > @uoce_e3u / @e3u </field>
<field field_ref="utau" name="tauuo" />
</file>
<file id="file13" name_suffix="_grid_V" description="ocean V grid variables" >
<file id="file3" name_suffix="_grid_V" description="ocean V grid variables" >
<field field_ref="e3v" />
<field field_ref="ssv" name="vos" />
<field field_ref="voce" name="vo" operation="instant" freq_op="5d" > @voce_e3v / @e3v </field>
<field field_ref="vtau" name="tauvo" />
</file>
<file id="file14" name_suffix="_grid_W" description="ocean W grid variables" >
<file id="file4" name_suffix="_grid_W" description="ocean W grid variables" >
<field field_ref="e3w" />
<field field_ref="woce" name="wo" />
<field field_ref="avt" name="difvho" />
......@@ -86,20 +86,20 @@
</file_group>
<file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->
<file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
<file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
<file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
<file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
<file_group id="1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files -->
<file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
<file_group id="oce_1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="oce_2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="oce_3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="oce_4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="oce_6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="oce_1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->
<file_group id="oce_2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
<file_group id="oce_3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
<file_group id="oce_4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
<file_group id="oce_6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
<file_group id="oce_1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files -->
<file_group id="oce_2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="oce_5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="oce_10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
</file_definition>
......
cfgs/WED025/EXPREF/namelist_cfg
View file @ dd59ced6
!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
!! NEMO/OCE : Reference namelist_ref !!
!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
!! NEMO/OCE : 1 - Domain & run manager (namrun, namcfg, namdom, namtsd, namcrs, namc1d, namc1d_uvd)
!! NEMO/OCE : 1 - Domain & run manager (namrun, namcfg, namdom, namtsd, namc1d)
!! namelists 2 - Surface boundary (namsbc, namsbc_flx, namsbc_blk, namsbc_cpl,
!! namsbc_sas, namtra_qsr, namsbc_rnf,
!! namisf, namsbc_apr,
......@@ -11,7 +11,7 @@
!! 5 - Tracer (nameos, namtra_adv, namtra_ldf, namtra_eiv, namtra_dmp)
!! 6 - dynamics (namdyn_adv, namdyn_vor, namdyn_hpg, namdyn_spg, namdyn_ldf)
!! 7 - Vertical physics (namzdf, namzdf_ric, namzdf_tke, namzdf_gls, namzdf_iwm)
!! 8 - diagnostics (namnc4, namtrd, namspr, namflo, namhsb)
!! 8 - diagnostics (namnc4, namtrd, namspr)
!! 9 - Obs & Assim (namobs, nam_asminc)
!! 10 - miscellaneous (nammpp, namctl, namsto)
!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
......@@ -24,10 +24,7 @@
!! namcfg parameters of the configuration (default: user defined GYRE)
!! namwad Wetting and drying (default: OFF)
!! namtsd data: temperature & salinity (default: OFF)
!! namcrs coarsened grid (for outputs and/or TOP) (ln_crs =T)
!! namc1d 1D configuration options (ln_c1d =T)
!! namc1d_dyndmp 1D newtonian damping applied on currents (ln_c1d =T)
!! namc1d_uvd 1D data (currents) (ln_c1d =T)
!!======================================================================
!
!-----------------------------------------------------------------------
......@@ -44,7 +41,7 @@
!-----------------------------------------------------------------------
&namdom ! time and space domain
!-----------------------------------------------------------------------
rn_Dt = 1200. ! time step for the dynamics and tracer
rn_Dt = 2400. ! time step for the dynamics and tracer
ln_meshmask = .true. ! =T create a mesh file
/
!-----------------------------------------------------------------------
......@@ -77,21 +74,9 @@
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namcrs ! coarsened grid (for outputs and/or TOP) (ln_crs =T)
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namc1d ! 1D configuration options (ln_c1d =T default: PAPA station)
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namc1d_dyndmp ! U & V newtonian damping (ln_c1d =T default: OFF)
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namc1d_uvd ! data: U & V currents (ln_c1d =T default: OFF)
!-----------------------------------------------------------------------
/
!!======================================================================
!! *** Surface Boundary Condition namelists *** !!
......@@ -179,6 +164,10 @@
ln_qsr_rgb = .true. ! RGB (Red-Green-Blue) light penetration
! ! RGB & 2BD choices:
nn_chldta = 1 ! RGB : 2D Chl data (=1), 3D Chl data (=2) or cst value (=0)
nn_chlprfl = 1 ! Chl vertical profile (nn_chldta = 1)
! 0 = vertical extrapolation of surface data
! 1 = vertical analytical profile deduced from surface data
! 2 = 3D Chl data
cn_dir = './' ! root directory for the chlorophyl data location
!___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________!
......@@ -489,6 +478,8 @@
&namdyn_spg ! surface pressure gradient (default: NO selection)
!-----------------------------------------------------------------------
ln_dynspg_ts = .true. ! split-explicit free surface
nn_bt_flt = 3 ! Time filtering with dissipative Forward Backward
rn_bt_alpha = 0.09 ! Dissipative Forward Backward parameter
/
!-----------------------------------------------------------------------
&namdyn_ldf ! lateral diffusion on momentum (default: NO selection)
......@@ -530,6 +521,7 @@
!-----------------------------------------------------------------------
&namzdf ! vertical physics manager (default: NO selection)
!-----------------------------------------------------------------------
ln_zad_Aimp = .true. ! Courant number dependent scheme (Shchepetkin 2015)
!
! ! type of vertical closure (required)
ln_zdftke = .true. ! Turbulent Kinetic Energy closure (T => fill namzdf_tke)
......@@ -552,6 +544,10 @@
!-----------------------------------------------------------------------
&namzdf_tke ! turbulent eddy kinetic dependent vertical diffusion (ln_zdftke =T)
!-----------------------------------------------------------------------
nn_mxlice = 2 ! type of scaling under sea-ice
! ! = 0 no scaling under sea-ice
! ! = 1 scaling with constant sea-ice thickness
! ! = 2 scaling with mean sea-ice thickness ( only with SI3 sea-ice model )
/
!-----------------------------------------------------------------------
&namzdf_gls ! GLS vertical diffusion (ln_zdfgls =T)
......@@ -570,15 +566,12 @@
!! *** Diagnostics namelists *** !!
!! !!
!! namtrd dynamics and/or tracer trends (default: OFF)
!! namhsb Heat and salt budgets (default: OFF)
!! namdiu Cool skin and warm layer models (default: OFF)
!! namdiu Cool skin and warm layer models (default: OFF)
!! namflo float parameters ("key_float")
!! nam_diaharm Harmonic analysis of tidal constituents ("key_diaharm")
!! namdct transports through some sections ("key_diadct")
!! nam_diatmb Top Middle Bottom Output (default: OFF)
!! nam_dia25h 25h Mean Output (default: OFF)
!! namnc4 netcdf4 chunking and compression settings ("key_netcdf4")
!! namnc4 netcdf4 chunking and compression settings
!!======================================================================
!
!-----------------------------------------------------------------------
......@@ -586,18 +579,10 @@
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namhsb ! Heat and salt budgets (default: OFF)
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namdiu ! Cool skin and warm layer models (default: OFF)
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namflo ! float parameters ("key_float")
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&nam_diaharm ! Harmonic analysis of tidal constituents ("key_diaharm")
!-----------------------------------------------------------------------
nit000_han = 1 ! First time step used for harmonic analysis
......@@ -617,11 +602,7 @@
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&nam_dia25h ! 25h Mean Output (default: OFF)
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namnc4 ! netcdf4 chunking and compression settings ("key_netcdf4")
&namnc4 ! netcdf4 chunking and compression settings
!-----------------------------------------------------------------------
/
......
cfgs/WED025/cpp_WED025.fcm
View file @ dd59ced6
bld::tool::fppkeys key_xios key_si3 key_qco key_isf
bld::tool::fppkeys key_xios key_si3 key_qco key_vco_1d3d key_isf
cfgs/X3_ORCA2_ICE_PISCES/EXPREF/axis_def_nemo.xml 0 → 100644
View file @ dd59ced6
<!--
============================================================================================================
= Axis definition = = DO NOT CHANGE =
============================================================================================================
-->
<axis_definition>
<axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" chunking_weight="12.0" />
<!-- Vertical zoom for a 31-levels ORCA2 grid. For eORCA1 300m corresponds to n=35 -->
<axis id="deptht300" axis_ref="deptht" chunking_weight="12.0" >
<extract_axis begin="0" n="19" />
</axis>
<axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" chunking_weight="12.0" />
<axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" chunking_weight="12.0" />
<axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" chunking_weight="12.0" />
<axis id="depthf" long_name="Vertical F levels" unit="m" positive="down" chunking_weight="12.0" />
<axis id="icbcla" long_name="Iceberg class" unit="1" />
<axis id="ncatice" long_name="Ice category" unit="1" />
<axis id="nlayice" long_name="Ice layer" unit="1" chunking_weight="1.0" />
<axis id="iax_20C" long_name="20 degC isotherm" unit="degC" />
<axis id="iax_26C" long_name="26 degC isotherm" unit="degC" />
<axis id="iax_28C" long_name="28 degC isotherm" unit="degC" />
<axis id="basin" long_name="Sub-basin mask (1=Global 2=Atlantic 3=Indo-Pacific 4=Indian, 5=Pacific)" unit="1" />
<axis id="nstrait" long_name="Number of straits" unit="1" />
<!-- ABL vertical axis definition -->
<axis id="ght_abl" long_name="ABL Vertical T levels" unit="m" positive="up" />
<axis id="ghw_abl" long_name="ABL Vertical W levels" unit="m" positive="up" />
<axis id="section" n_glo="16" />
<axis id="section_ice" n_glo="4" />
<axis id="gau" />
<!-- PISCES Sediment vertical axis definition -->
<axis id="profsed" long_name="Vertical S levels" unit="cm" positive="down"/>
</axis_definition>
tests/DIA_GPU/EXPREF/context_nemo.xml → cfgs/X3_ORCA2_ICE_PISCES/EXPREF/context_nemo.xml
View file @ dd59ced6
......@@ -4,7 +4,7 @@
==============================================================================================
-->
<context id="nemo">
<!-- $id$ -->
<variable_definition>
<!-- Year/Month/Day of time origin for NetCDF files; defaults to 1800-01-01 -->
<variable id="ref_year" type="int"> 1900 </variable>
......@@ -28,7 +28,6 @@
<file_definition src="./file_def_nemo-ice.xml"/> <!-- NEMO sea-ice model -->
<file_definition src="./file_def_nemo-pisces.xml"/> <!-- NEMO ocean biology -->
<!-- Axis definition -->
<axis_definition src="./axis_def_nemo.xml"/>
......
cfgs/X3_ORCA2_ICE_PISCES/EXPREF/domain_def_nemo.xml 0 → 100644
View file @ dd59ced6
<domain_definition>
<!-- T grid -->
<domain id="grid_T" long_name="grid T" chunking_weight_i="1.0" chunking_weight_j="1.0" />
<domain id="grid_T_inner" long_name="grid T inner" chunking_weight_i="1.0" chunking_weight_j="1.0"/>
<!-- My zoom: example of hand defined zoom -->
<domain id="myzoomT" domain_ref="grid_T" >
<extract_domain ibegin="1" jbegin="1" ni="2" nj="3"/>
</domain>
<domain id="1point" domain_ref="grid_T" >
<extract_domain ibegin="139" jbegin="119" ni="1" nj="1"/>
</domain>
<!-- Eq section -->
<domain id="EqT" domain_ref="grid_T" > <extract_domain id="EqT"/> </domain>
<!-- TAO : see example above -->
<!-- 137e -->
<domain id="2n137eT" domain_ref="grid_T" > <extract_domain id="2n137eT"/> </domain>
<domain id="5n137eT" domain_ref="grid_T" > <extract_domain id="5n137eT"/> </domain>
<domain id="8n137eT" domain_ref="grid_T" > <extract_domain id="8n137eT"/> </domain>
<!-- <\!-- 147e -\-> -->
<domain id="0n147eT" domain_ref="grid_T" > <extract_domain id="0n147eT"/> </domain>
<domain id="2n147eT" domain_ref="grid_T" > <extract_domain id="2n147eT"/> </domain>
<domain id="5n147eT" domain_ref="grid_T" > <extract_domain id="5n147eT"/> </domain>
<!-- <\!-- 156e -\-> -->
<domain id="5s156eT" domain_ref="grid_T" > <extract_domain id="5s156eT"/> </domain>
<domain id="2s156eT" domain_ref="grid_T" > <extract_domain id="2s156eT"/> </domain>
<domain id="0n156eT" domain_ref="grid_T" > <extract_domain id="0n156eT"/> </domain>
<domain id="2n156eT" domain_ref="grid_T" > <extract_domain id="2n156eT"/> </domain>
<domain id="5n156eT" domain_ref="grid_T" > <extract_domain id="5n156eT"/> </domain>
<domain id="8n156eT" domain_ref="grid_T" > <extract_domain id="8n156eT"/> </domain>
<!-- <\!-- 165e -\-> -->
<domain id="8s165eT" domain_ref="grid_T" > <extract_domain id="8s165eT"/> </domain>
<domain id="5s165eT" domain_ref="grid_T" > <extract_domain id="5s165eT"/> </domain>
<domain id="2s165eT" domain_ref="grid_T" > <extract_domain id="2s165eT"/> </domain>
<domain id="0n165eT" domain_ref="grid_T" > <extract_domain id="0n165eT"/> </domain>
<domain id="2n165eT" domain_ref="grid_T" > <extract_domain id="2n165eT"/> </domain>
<domain id="5n165eT" domain_ref="grid_T" > <extract_domain id="5n165eT"/> </domain>
<domain id="8n165eT" domain_ref="grid_T" > <extract_domain id="8n165eT"/> </domain>
<!-- <\!-- 180w -\-> -->
<domain id="8s180wT" domain_ref="grid_T" > <extract_domain id="8s180wT"/> </domain>
<domain id="5s180wT" domain_ref="grid_T" > <extract_domain id="5s180wT"/> </domain>
<domain id="2s180wT" domain_ref="grid_T" > <extract_domain id="2s180wT"/> </domain>
<domain id="0n180wT" domain_ref="grid_T" > <extract_domain id="0n180wT"/> </domain>
<domain id="2n180wT" domain_ref="grid_T" > <extract_domain id="2n180wT"/> </domain>
<domain id="5n180wT" domain_ref="grid_T" > <extract_domain id="5n180wT"/> </domain>
<domain id="8n180wT" domain_ref="grid_T" > <extract_domain id="8n180wT"/> </domain>
<!-- <\!-- 170w -\-> -->
<domain id="8s170wT" domain_ref="grid_T" > <extract_domain id="8s170wT"/> </domain>
<domain id="5s170wT" domain_ref="grid_T" > <extract_domain id="5s170wT"/> </domain>
<domain id="2s170wT" domain_ref="grid_T" > <extract_domain id="2s170wT"/> </domain>
<domain id="0n170wT" domain_ref="grid_T" > <extract_domain id="0n170wT"/> </domain>
<domain id="2n170wT" domain_ref="grid_T" > <extract_domain id="2n170wT"/> </domain>
<domain id="5n170wT" domain_ref="grid_T" > <extract_domain id="5n170wT"/> </domain>
<domain id="8n170wT" domain_ref="grid_T" > <extract_domain id="8n170wT"/> </domain>
<!-- <\!-- 155w -\-> -->
<domain id="8s155wT" domain_ref="grid_T" > <extract_domain id="8s155wT"/> </domain>
<domain id="5s155wT" domain_ref="grid_T" > <extract_domain id="5s155wT"/> </domain>
<domain id="2s155wT" domain_ref="grid_T" > <extract_domain id="2s155wT"/> </domain>
<domain id="0n155wT" domain_ref="grid_T" > <extract_domain id="0n155wT"/> </domain>
<domain id="2n155wT" domain_ref="grid_T" > <extract_domain id="2n155wT"/> </domain>
<domain id="5n155wT" domain_ref="grid_T" > <extract_domain id="5n155wT"/> </domain>
<domain id="8n155wT" domain_ref="grid_T" > <extract_domain id="8n155wT"/> </domain>
<!-- <\!-- 140w -\-> -->
<domain id="8s140wT" domain_ref="grid_T" > <extract_domain id="8s140wT"/> </domain>
<domain id="5s140wT" domain_ref="grid_T" > <extract_domain id="5s140wT"/> </domain>
<domain id="2s140wT" domain_ref="grid_T" > <extract_domain id="2s140wT"/> </domain>
<domain id="0n140wT" domain_ref="grid_T" > <extract_domain id="0n140wT"/> </domain>
<domain id="2n140wT" domain_ref="grid_T" > <extract_domain id="2n140wT"/> </domain>
<domain id="5n140wT" domain_ref="grid_T" > <extract_domain id="5n140wT"/> </domain>
<domain id="8n140wT" domain_ref="grid_T" > <extract_domain id="8n140wT"/> </domain>
<!-- <\!-- 125w -\-> -->
<domain id="8s125wT" domain_ref="grid_T" > <extract_domain id="8s125wT"/> </domain>
<domain id="5s125wT" domain_ref="grid_T" > <extract_domain id="5s125wT"/> </domain>
<domain id="2s125wT" domain_ref="grid_T" > <extract_domain id="2s125wT"/> </domain>
<domain id="0n125wT" domain_ref="grid_T" > <extract_domain id="0n125wT"/> </domain>
<domain id="2n125wT" domain_ref="grid_T" > <extract_domain id="2n125wT"/> </domain>
<domain id="5n125wT" domain_ref="grid_T" > <extract_domain id="5n125wT"/> </domain>
<domain id="8n125wT" domain_ref="grid_T" > <extract_domain id="8n125wT"/> </domain>
<!-- <\!-- 110w -\-> -->
<domain id="8s110wT" domain_ref="grid_T" > <extract_domain id="8s110wT"/> </domain>
<domain id="5s110wT" domain_ref="grid_T" > <extract_domain id="5s110wT"/> </domain>
<domain id="2s110wT" domain_ref="grid_T" > <extract_domain id="2s110wT"/> </domain>
<domain id="0n110wT" domain_ref="grid_T" > <extract_domain id="0n110wT"/> </domain>
<domain id="2n110wT" domain_ref="grid_T" > <extract_domain id="2n110wT"/> </domain>
<domain id="5n110wT" domain_ref="grid_T" > <extract_domain id="5n110wT"/> </domain>
<domain id="8n110wT" domain_ref="grid_T" > <extract_domain id="8n110wT"/> </domain>
<!-- <\!-- 95w -\-> -->
<domain id="8s95wT" domain_ref="grid_T" > <extract_domain id="8s95wT"/> </domain>
<domain id="5s95wT" domain_ref="grid_T" > <extract_domain id="5s95wT"/> </domain>
<domain id="2s95wT" domain_ref="grid_T" > <extract_domain id="2s95wT"/> </domain>
<domain id="0n95wT" domain_ref="grid_T" > <extract_domain id="0n95wT"/> </domain>
<domain id="2n95wT" domain_ref="grid_T" > <extract_domain id="2n95wT"/> </domain>
<domain id="5n95wT" domain_ref="grid_T" > <extract_domain id="5n95wT"/> </domain>
<domain id="8n95wT" domain_ref="grid_T" > <extract_domain id="8n95wT"/> </domain>
<!-- <\!-- RAMA -\-> -->
<!-- <\!-- 55e -\-> -->
<domain id="16s55eT" domain_ref="grid_T" > <extract_domain id="16s55eT" /> </domain>
<domain id="12s55eT" domain_ref="grid_T" > <extract_domain id="12s55eT" /> </domain>
<domain id="8s55eT" domain_ref="grid_T" > <extract_domain id="8s55eT" /> </domain>
<domain id="4s55eT" domain_ref="grid_T" > <extract_domain id="4s55eT" /> </domain>
<domain id="1.5s55eT" domain_ref="grid_T" > <extract_domain id="1.5s55eT" /> </domain>
<domain id="0n55eT" domain_ref="grid_T" > <extract_domain id="0n55eT" /> </domain>
<domain id="1.5n55eT" domain_ref="grid_T" > <extract_domain id="1.5n55eT" /> </domain>
<domain id="4n55eT" domain_ref="grid_T" > <extract_domain id="4n55eT" /> </domain>
<!-- <\!-- 65e -\-> -->
<domain id="15n65eT" domain_ref="grid_T" > <extract_domain id="15n65eT" /> </domain>
<!-- <\!-- 67e -\-> -->
<domain id="16s67eT" domain_ref="grid_T" > <extract_domain id="16s67eT" /> </domain>
<domain id="12s67eT" domain_ref="grid_T" > <extract_domain id="12s67eT" /> </domain>
<domain id="8s67eT" domain_ref="grid_T" > <extract_domain id="8s67eT" /> </domain>
<domain id="4s67eT" domain_ref="grid_T" > <extract_domain id="4s67eT" /> </domain>
<domain id="1.5s67eT" domain_ref="grid_T" > <extract_domain id="1.5s67eT" /> </domain>
<domain id="0n67eT" domain_ref="grid_T" > <extract_domain id="0n67eT" /> </domain>
<domain id="1.5n67eT" domain_ref="grid_T" > <extract_domain id="1.5n67eT" /> </domain>
<domain id="4n67eT" domain_ref="grid_T" > <extract_domain id="4n67eT" /> </domain>
<domain id="8n67eT" domain_ref="grid_T" > <extract_domain id="8n67eT" /> </domain>
<!-- <\!-- 80.5e -\-> -->
<domain id="16s80.5eT" domain_ref="grid_T" > <extract_domain id="16s80.5eT" /> </domain>
<domain id="12s80.5eT" domain_ref="grid_T" > <extract_domain id="12s80.5eT" /> </domain>
<domain id="8s80.5eT" domain_ref="grid_T" > <extract_domain id="8s80.5eT" /> </domain>
<domain id="4s80.5eT" domain_ref="grid_T" > <extract_domain id="4s80.5eT" /> </domain>
<domain id="1.5s80.5eT" domain_ref="grid_T" > <extract_domain id="1.5s80.5eT"/> </domain>
<domain id="0n80.5eT" domain_ref="grid_T" > <extract_domain id="0n80.5eT" /> </domain>
<domain id="1.5n80.5eT" domain_ref="grid_T" > <extract_domain id="1.5n80.5eT"/> </domain>
<domain id="4n80.5eT" domain_ref="grid_T" > <extract_domain id="4n80.5eT" /> </domain>
<!-- <\!-- 90e -\-> -->
<domain id="1.5s90eT" domain_ref="grid_T" > <extract_domain id="1.5s90eT" /> </domain>
<domain id="0n90eT" domain_ref="grid_T" > <extract_domain id="0n90eT" /> </domain>
<domain id="1.5n90eT" domain_ref="grid_T" > <extract_domain id="1.5n90eT" /> </domain>
<domain id="4n90eT" domain_ref="grid_T" > <extract_domain id="4n90eT" /> </domain>
<domain id="8n90eT" domain_ref="grid_T" > <extract_domain id="8n90eT" /> </domain>
<domain id="12n90eT" domain_ref="grid_T" > <extract_domain id="12n90eT" /> </domain>
<domain id="15n90eT" domain_ref="grid_T" > <extract_domain id="15n90eT" /> </domain>
<!-- <\!-- 95e -\-> -->
<domain id="16s95eT" domain_ref="grid_T" > <extract_domain id="16s95eT" /> </domain>
<domain id="12s95eT" domain_ref="grid_T" > <extract_domain id="12s95eT" /> </domain>
<domain id="8s95eT" domain_ref="grid_T" > <extract_domain id="8s95eT" /> </domain>
<domain id="5s95eT" domain_ref="grid_T" > <extract_domain id="5s95eT" /> </domain>
<!-- <\!-- PIRATA -\-> -->
<!-- <\!-- 38w-30w -\-> -->
<domain id="19s34wT" domain_ref="grid_T" > <extract_domain id="19s34wT"/> </domain>
<domain id="14s32wT" domain_ref="grid_T" > <extract_domain id="14s32wT"/> </domain>
<domain id="8s30wT" domain_ref="grid_T" > <extract_domain id="8s30wT" /> </domain>
<domain id="0n35wT" domain_ref="grid_T" > <extract_domain id="0n35wT" /> </domain>
<domain id="4n38wT" domain_ref="grid_T" > <extract_domain id="4n38wT" /> </domain>
<domain id="8n38wT" domain_ref="grid_T" > <extract_domain id="8n38wT" /> </domain>
<domain id="12n38wT" domain_ref="grid_T" > <extract_domain id="12n38wT"/> </domain>
<domain id="15n38wT" domain_ref="grid_T" > <extract_domain id="15n38wT"/> </domain>
<domain id="20n38wT" domain_ref="grid_T" > <extract_domain id="20n38wT"/> </domain>
<!-- <\!-- 23w -\-> -->
<domain id="0n23wT" domain_ref="grid_T" > <extract_domain id="0n23wT" /> </domain>
<domain id="4n23wT" domain_ref="grid_T" > <extract_domain id="4n23wT" /> </domain>
<domain id="12n23wT" domain_ref="grid_T" > <extract_domain id="12n23wT"/> </domain>
<domain id="21n23wT" domain_ref="grid_T" > <extract_domain id="21n23wT"/> </domain>
<!-- <\!-- 10w -\-> -->
<domain id="10s10wT" domain_ref="grid_T" > <extract_domain id="10s10wT"/> </domain>
<domain id="6s10wT" domain_ref="grid_T" > <extract_domain id="6s10wT" /> </domain>
<domain id="0n10wT" domain_ref="grid_T" > <extract_domain id="0n10wT" /> </domain>
<!-- <\!-- 0e -\-> -->
<domain id="0n0eT" domain_ref="grid_T" > <extract_domain id="0n0eT" /> </domain>
<!-- U grid -->
<domain id="grid_U" long_name="grid U" chunking_weight_i="1.0" chunking_weight_j="1.0"/>
<domain id="grid_U_inner" long_name="grid U inner" chunking_weight_i="1.0" chunking_weight_j="1.0"/>
<!-- Eq section -->
<domain id="EqU" domain_ref="grid_U" > <extract_domain id="EqU"/> </domain>
<!-- V grid -->
<domain id="grid_V" long_name="grid V" chunking_weight_i="1.0" chunking_weight_j="1.0"/>
<domain id="grid_V_inner" long_name="grid V inner" chunking_weight_i="1.0" chunking_weight_j="1.0"/>
<!-- Eq section : no V point on the Equator... -->
<!-- W grid -->
<domain id="grid_W" long_name="grid W" chunking_weight_i="1.0" chunking_weight_j="1.0"/>
<domain id="grid_W_inner" long_name="grid W inner" chunking_weight_i="1.0" chunking_weight_j="1.0"/>
<!-- Eq section -->
<domain id="EqW" domain_ref="grid_W" > <extract_domain id="EqW"/> </domain>
<!-- F grid -->
<domain id="grid_F" long_name="grid F" chunking_weight_i="1.0" chunking_weight_j="1.0"/>
<domain id="grid_F_inner" long_name="grid F inner" chunking_weight_i="1.0" chunking_weight_j="1.0"/>
<!-- zonal mean grid -->
<domain_group id="gznl">
<domain id="gznl" long_name="gznl"/>
<domain id="ptr" domain_ref="gznl" >
<extract_domain id="ptr" ibegin="0000" jbegin="0" ni="1" nj="0000" />
</domain>
</domain_group>
<!-- other grids -->
<domain id="scalarpoint" long_name="scalar"/>
</domain_definition>
cfgs/X3_ORCA2_ICE_PISCES/EXPREF/field_def_nemo-ice.xml 0 → 100644
View file @ dd59ced6
<?xml version="1.0"?>
<!--
============================================================================================================
= definition of all existing sea ice variables =
= DO NOT CHANGE =
============================================================================================================
-->
<field_definition level="1" prec="4" operation="average" enabled=".TRUE." default_value="1.e20" > <!-- time step automaticaly defined -->
<!--
============================================================================================================
Physical sea ice model variables
============================================================================================================
-->
<field_group id="SBC" chunking_blocksize_target="3.0" > <!-- time step automatically defined based on nn_fsbc -->
<!-- 2D variables -->
<field_group id="SBC_2D" grid_ref="grid_T_2D_inner" >
<!-- =================== -->
<!-- standard ice fields -->
<!-- =================== -->
<!-- ice presence masks -->
<field id="icemask" long_name="Fraction of time steps with sea ice" standard_name="sea_ice_mask" unit="" />
<field id="icemask05" long_name="Ice mask (0 if ice conc. lower than 5%, 1 otherwise)" standard_name="sea_ice_mask05" unit="" />
<field id="icemask15" long_name="Ice mask (0 if ice conc. lower than 15%, 1 otherwise)" standard_name="sea_ice_mask15" unit="" />
<field id="icepres" long_name="Fraction of time steps with sea ice" standard_name="sea_ice_time_fraction" unit="" />
<field id="fasticepres" long_name="Fraction of time steps with landfast ice" standard_name="fast_ice_time_fraction" unit="" />
<!-- general fields -->
<field id="icemass" long_name="Sea-ice mass per gridcell area" standard_name="sea_ice_amount" unit="kg/m2"/>
<field id="snwmass" long_name="Snow mass per area" standard_name="liquid_water_content_of_surface_snow" unit="kg/m2"/>
<field id="iceconc" long_name="Sea-ice area fraction" standard_name="sea_ice_area_fraction" unit="" />
<field id="icevolu" long_name="Sea-ice volume per area" standard_name="sea_ice_thickness" unit="m" />
<field id="icethic" long_name="Sea-ice thickness" standard_name="sea_ice_thickness" unit="m" />
<field id="snwthic" long_name="Snow thickness" standard_name="snow_thickness" unit="m" />
<field id="icebrv" long_name="brine volume" unit="%" />
<field id="iceage" long_name="ice age" unit="days" detect_missing_value="true"/>
<field id="icehnew" long_name="frazil ice collection thickness" unit="m" />
<field id="snwvolu" long_name="snow volume" unit="m" />
<field id="icefrb" long_name="Sea-ice freeboard" standard_name="sea_ice_freeboard" unit="m" />
<field id="icealb" long_name="Sea-ice or snow albedo" standard_name="sea_ice_albedo" unit="" detect_missing_value="true" />
<!-- melt ponds -->
<field id="iceapnd" long_name="melt pond concentration" standard_name="sea_ice_meltpond_concentration" unit="" />
<field id="iceapeff" long_name="melt pond concentration effective" standard_name="sea_ice_meltpond_concentration effective" unit="" />
<field id="icehpnd" long_name="melt pond depth" standard_name="sea_ice_meltpond_depth" unit="m" />
<field id="icevpnd" long_name="melt pond volume" standard_name="sea_ice_meltpond_volume" unit="m" />
<field id="icehlid" long_name="melt pond lid depth" standard_name="sea_ice_meltpondlid_depth" unit="m" />
<field id="icevlid" long_name="melt pond lid volume" standard_name="sea_ice_meltpondlid_volume" unit="m" />
<field id="dvpn_mlt" long_name="pond volume tendency due to surface melt" standard_name="sea_ice_pondvolume_tendency_melt" unit="kg/m2/s" />
<field id="dvpn_lid" long_name="pond volume tendency due to exchanges with lid" standard_name="sea_ice_pondvolume_tendency_lids" unit="kg/m2/s" />
<field id="dvpn_rnf" long_name="pond volume tendency due to runoff" standard_name="sea_ice_pondvolume_tendency_runoff" unit="kg/m2/s" />
<field id="dvpn_drn" long_name="pond volume tendency due to drainage" standard_name="sea_ice_pondvolume_tendency_drainage" unit="kg/m2/s" />
<!-- heat -->
<field id="icetemp" long_name="Mean ice temperature" unit="degC" detect_missing_value="true" />
<field id="snwtemp" long_name="Mean snow temperature" unit="degC" detect_missing_value="true" />
<field id="icettop" long_name="temperature at the ice surface" unit="degC" detect_missing_value="true" />
<field id="icetbot" long_name="temperature at the ice bottom" unit="degC" detect_missing_value="true" />
<field id="icetsni" long_name="temperature at the snow-ice interface" unit="degC" detect_missing_value="true" />
<field id="icehc" long_name="ice heat content" unit="J/m2" />
<field id="snwhc" long_name="snow heat content" unit="J/m2" />
<!-- salt -->
<field id="icesalt" long_name="Sea ice salinity" unit="g/kg" detect_missing_value="true" />
<field id="icesalm" long_name="Mass of salt in sea ice per area" standard_name="sea_ice_salt_mass" unit="kg/m2" />
<!-- momentum (rheology) -->
<field id="uice" long_name="X-component of sea ice velocity" standard_name="sea_ice_x_velocity" unit="m/s" grid_ref="grid_T_2D" />
<field id="vice" long_name="Y-component of sea ice velocity" standard_name="sea_ice_y_velocity" unit="m/s" grid_ref="grid_T_2D" />
<field id="icevel" long_name="Sea-ice speed" standard_name="sea_ice_speed" unit="m/s" />
<field id="utau_ai" long_name="X-component of atmospheric stress on sea ice" standard_name="surface_downward_x_stress" unit="N/m2" />
<field id="vtau_ai" long_name="Y-component of atmospheric stress on sea ice" standard_name="surface_downward_y_stress" unit="N/m2" />
<field id="utau_oi" long_name="X-component of ocean stress on sea ice" standard_name="sea_ice_base_upward_x_stress" unit="N/m2" />
<field id="vtau_oi" long_name="Y-component of ocean stress on sea ice" standard_name="sea_ice_base_upward_y_stress" unit="N/m2" />
<field id="utau_bi" long_name="X-component of ocean bottom stress on sea ice -landfast" standard_name="ocean_bottom_upward_x_stress" unit="N/m2" />
<field id="vtau_bi" long_name="Y-component of ocean bottom stress on sea ice -landfast" standard_name="ocean_bottom_upward_y_stress" unit="N/m2" />
<field id="taum_ice" long_name="Module of atmospheric stress on sea ice (T-points)" standard_name="mod_surface_downward_stress" unit="N/m2" />
<field id="utau_ice" long_name="X-component of ocean stress on sea ice (T-points)" standard_name="sea_ice_base_upward_x_stress_Tpoints" unit="N/m2" />
<field id="vtau_ice" long_name="Y-component of ocean stress on sea ice (T-points)" standard_name="sea_ice_base_upward_y_stress_Tpoints" unit="N/m2" />
<field id="sig1_pnorm" long_name="P-normalized 1st principal stress component" unit="" />
<field id="sig2_pnorm" long_name="P-normalized 2nd principal stress component" unit="" />
<field id="icedlt" long_name="delta" standard_name="delta" unit="" />
<field id="normstr" long_name="Average normal stress in sea ice" standard_name="average_normal_stress" unit="N/m" />
<field id="sheastr" long_name="Maximum shear stress in sea ice" standard_name="maximum_shear_stress" unit="N/m" />
<field id="icestr" long_name="Compressive sea ice strength" standard_name="compressive_strength_of_sea_ice" unit="N/m" />
<field id="icediv" long_name="Divergence of the sea-ice velocity field" standard_name="divergence_of_sea_ice_velocity" unit="s-1" />
<field id="iceshe" long_name="Maximum shear of sea-ice velocity field" standard_name="maximum_shear_of_sea_ice_velocity" unit="s-1" />
<field id="aniso" long_name="anisotropy of sea ice floe orientation (0.5 - 1)" standard_name="anisotropy" unit="" />
<field id="yield11" long_name="yield surface tensor component 11" standard_name="yield11" unit="N/m" />
<field id="yield22" long_name="yield surface tensor component 22" standard_name="yield22" unit="N/m" />
<field id="yield12" long_name="yield surface tensor component 12" standard_name="yield12" unit="N/m" />
<field id="beta_evp" long_name="Relaxation parameter of ice rheology (beta)" standard_name="relaxation_parameter_of_ice_rheology" unit="" grid_ref="grid_T_2D" />
<field id="lead_open" long_name="Lead area opening rate" standard_name="lead_open" unit="1/s" />
<field id="rdg_loss" long_name="Ridging ice area loss rate" standard_name="rdg_loss" unit="1/s" />
<field id="rft_loss" long_name="Rafting ice area loss rate"
standard_name="rft_loss" unit="1/s" />
<field id="rdg_gain" long_name="New ridged ice area gain rate" standard_name="rdg_gain" unit="1/s" />
<field id="rft_gain" long_name="New rafted ice area gain rate" standard_name="rft_gain" unit="1/s" />
<!-- surface heat fluxes -->
<field id="qt_ice" long_name="total heat flux at ice surface" standard_name="surface_downward_heat_flux_in_air" unit="W/m2" />
<field id="qsr_ice" long_name="solar heat flux at ice surface" standard_name="surface_downwelling_shortwave_flux_in_air" unit="W/m2" />
<field id="qlw_ice" long_name="longwave (IR) heat flux at ice surface" standard_name="surface_downwelling_longwave_flux_in_air" unit="W/m2" />
<field id="qns_ice" long_name="non-solar heat flux at ice surface (including E-P)" unit="W/m2" />
<field id="qla_ice" long_name="latent (sublimation) heat flux at ice surface" unit="W/m2" />
<field id="qsb_ice" long_name="sensible heat flux at ice surface" unit="W/m2" />
<field id="qtr_ice_bot" long_name="solar heat flux transmitted through the ice (to the ocean)" unit="W/m2" />
<field id="qtr_ice_top" long_name="solar heat flux transmitted through the ice surface" unit="W/m2" />
<field id="qt_oce_ai" long_name="total heat flux at the ocean surface: interface oce-(ice+atm)" unit="W/m2" />
<field id="qt_atm_oi" long_name="total heat flux at the oce-ice surface: interface atm-(ice+oce)" unit="W/m2" />
<field id="qemp_ice" long_name="Downward Heat Flux from E-P over ice" unit="W/m2" />
<field id="albedo" long_name="Mean albedo over sea ice and ocean" unit="" />
<field id="Cd_ice" long_name="Drag coefficient over sea-ice" standard_name="drag_coefficient_ice" unit="" />
<field id="Ce_ice" long_name="Sublimation coefficient over sea-ice" standard_name="evap_coefficient_ice" unit="" />
<field id="Ch_ice" long_name="Sensible heat coefficient over sea-ice" standard_name="sensible_heat_coefficient_ice" unit="" />
<field id="drag_io" long_name="momentum drag coefficient ice-ocean" standard_name="sea_ice_ocean_drag" unit=" " />
<field id="drag_io_skin" long_name="momentum drag coefficient ice-ocean skin" standard_name="sea_ice_ocean_drag skin" unit=" " />
<field id="drag_io_keel" long_name="momentum drag coefficient ice-ocean keel" standard_name="sea_ice_ocean_drag keel" unit=" " />
<field id="drag_io_floe" long_name="momentum drag coefficient ice-ocean floe" standard_name="sea_ice_ocean_drag floe" unit=" " />
<field id="drag_ia" long_name="momentum drag coefficient ice-atmosphere" standard_name="sea_ice_atmosphere_drag" unit=" " />
<field id="drag_ia_skin" long_name="momentum drag coefficient ice-atmosphere skin" standard_name="sea_ice_atmosphere_drag skin" unit=" " />
<field id="drag_ia_rdg" long_name="momentum drag coefficient ice-atmosphere rdg" standard_name="sea_ice_atmosphere_drag rdg" unit=" " />
<field id="drag_ia_floe" long_name="momentum drag coefficient ice-atmosphere floe" standard_name="sea_ice_atmosphere_drag floe" unit=" " />
<field id="drag_ia_pond" long_name="momentum drag coefficient ice-atmosphere pond" standard_name="sea_ice_atmosphere_drag pond" unit=" " />
<field id="ardg_drag" long_name="ridged ice concentration" standard_name="ridged ice concentration" unit=" " />
<field id="vrdg_drag" long_name="ridged ice thickness" standard_name="ridged ice thickness" unit="m" />
<!-- trends -->
<field id="afxthd" long_name="sea-ice area fraction change from thermodynamics" standard_name="tendency_of_sea_ice_area_fraction_due_to_dynamics" unit="s-1" />
<field id="afxdyn" long_name="sea-ice area fraction change from dynamics" standard_name="tendency_of_sea_ice_area_fraction_due_to_dynamics" unit="s-1" />
<field id="afxtot" long_name="area tendency (total)" unit="s-1" />
<!-- momentum (advection) -->
<field id="icemtrp" long_name="ice mass transport" unit="kg/m2/s" />
<field id="snwmtrp" long_name="snw mass transport" unit="kg/m2/s" />
<field id="salmtrp" long_name="salt mass transport" unit="kg/m2/s" />
<field id="dihctrp" long_name="ice heat content transport" unit="W/m2" />
<field id="dshctrp" long_name="snw heat content transport" unit="W/m2" />
<!-- salt fluxes -->
<field id="sfxice" long_name="ice-ocean salt flux from ice growth/melt (neg = growth)" unit="kg/m2/s" />
<field id="sfxbog" long_name="ice-ocean salt flux from ice bottom growth" unit="kg/m2/s" />
<field id="sfxbom" long_name="ice-ocean salt flux from ice bottom melt" unit="kg/m2/s" />
<field id="sfxsum" long_name="ice-ocean salt flux from ice surface melt" unit="kg/m2/s" />
<field id="sfxlam" long_name="ice-ocean salt flux from ice lateral melt" unit="kg/m2/s" />
<field id="sfxsni" long_name="ice-ocean salt flux from snow-ice formation" unit="kg/m2/s" />
<field id="sfxopw" long_name="ice-ocean salt flux from ice formation in open water" unit="kg/m2/s" />
<field id="sfxdyn" long_name="ice-ocean salt flux from ice dynamics (ridging)" unit="kg/m2/s" />
<field id="sfxbri" long_name="ice-ocean salt flux from brines" unit="kg/m2/s" />
<field id="sfxres" long_name="ice-ocean salt flux from undiagnosed processes" unit="kg/m2/s" />
<field id="sfxsub" long_name="ice-ocean salt flux from ice sublimation" unit="kg/m2/s" />
<!-- mass fluxes -->
<field id="vfxice" long_name="ice-ocean mass flux from ice melt/growth (neg = growth)" unit="kg/m2/s" />
<field id="vfxbog" long_name="ice-ocean mass flux from ice bottom growth" unit="kg/m2/s" />
<field id="vfxbom" long_name="ice-ocean mass flux from ice bottom melt" unit="kg/m2/s" />
<field id="vfxsum" long_name="ice-ocean mass flux from ice surface melt" unit="kg/m2/s" />
<field id="vfxlam" long_name="ice-ocean mass flux from ice lateral melt" unit="kg/m2/s" />
<field id="vfxsni" long_name="ice-ocean mass flux from snow-ice formation" unit="kg/m2/s" />
<field id="vfxopw" long_name="ice-ocean mass flux from ice growth in open water" unit="kg/m2/s" />
<field id="vfxdyn" long_name="ice-ocean mass flux from ice dynamics (ridging)" unit="kg/m2/s" />
<field id="vfxres" long_name="ice-ocean mass flux from undiagnosed processes" unit="kg/m2/s" />
<field id="vfxpnd" long_name="ice-ocean mass flux from ice melt ponds" unit="kg/m2/s" />
<field id="vfxsub" long_name="ice-atm. mass flux from ice sublimation" unit="kg/m2/s" />
<field id="vfxsub_err" long_name="ice-ocean mass flux from unbalance in sublimation (incl. in qt_oce_ai)" unit="kg/m2/s" />
<field id="vfxthin" long_name="ice-ocean mass flux from ice growth in open water + thin ice(20cm)" unit="kg/m2/s" />
<field id="vfxsnw" long_name="ice-ocean mass flux from snw melt/growth (neg = growth)" unit="kg/m2/s" />
<field id="vfxsnw_sum" long_name="ice-ocean mass flux from snw surface melt" unit="kg/m2/s" />
<field id="vfxsnw_sni" long_name="ice-ocean mass flux from snow-ice formation" unit="kg/m2/s" />
<field id="vfxsnw_dyn" long_name="ice-ocean mass flux from dynamics (ridging)" unit="kg/m2/s" />
<field id="vfxsnw_sub" long_name="ice-atm. mass flux from snw sublimation" unit="kg/m2/s" />
<field id="vfxsnw_pre" long_name="snw precipitation on ice" unit="kg/m2/s" />
<!-- heat fluxes -->
<field id="hfxbog" long_name="heat flux used for bottom ice growth (neg.)" unit="W/m2" />
<field id="hfxbom" long_name="heat flux used for bottom ice melt (pos.)" unit="W/m2" />
<field id="hfxsum" long_name="heat flux used for surface ice melt" unit="W/m2" />
<field id="hfxopw" long_name="heat flux used for open water ice formation" unit="W/m2" />
<field id="hfxdif" long_name="heat flux used for ice temperature change" unit="W/m2" />
<field id="hfxsnw" long_name="heat flux used for snow melt" unit="W/m2" />
<field id="hfxerr" long_name="heat flux error after heat diffusion" unit="W/m2" />
<!-- heat fluxes associated with mass exchange -->
<field id="hfxthd" long_name="heat fluxes from ice-ocean mass exchange during thermo" unit="W/m2" />
<field id="hfxdyn" long_name="heat fluxes from ice-ocean mass exchange during dynamic" unit="W/m2" />
<field id="hfxres" long_name="heat fluxes from undiagnosed processes" unit="W/m2" />
<field id="hfxsub" long_name="heat fluxes from ice-atm. mass exchange during sublimation" unit="W/m2" />
<field id="hfxspr" long_name="heat fluxes from ice-atm. mass exchange during snow precip" unit="W/m2" />
<field id="hfxsensib" long_name="Net sensible heat flux under sea ice (neg = ice cooling)" standard_name="ice_ocean_heat_flux" unit="W/m2" />
<field id="hfxcndtop" long_name="Net conductive heat flux at the ice surface (neg = ice cooling)" standard_name="conductive_heat_flux_at_sea_ice_surface" unit="W/m2" />
<field id="hfxcndbot" long_name="Net conductive heat flux at the ice bottom (neg = ice cooling)" standard_name="conductive_heat_flux_at_sea_ice_bottom" unit="W/m2" />
<field id="hfxmelt" long_name="Melt heat flux at the ice surface" unit="W/m2" />
<field id="hfxldmelt" long_name="Heat flux in the lead for ice melting" unit="W/m2" />
<field id="hfxldgrow" long_name="Heat flux in the lead for ice growth" unit="W/m2" />
<!-- diags -->
<field id="hfxdhc" long_name="Heat content variation in snow and ice (neg = ice cooling)" unit="W/m2" />
<!-- available if ln_icediachk=T -->
<field id="icedrift_mass" long_name="Ice mass drift (conservation check)" unit="kg/m2/s" />
<field id="icedrift_salt" long_name="Ice salt drift (conservation check)" unit="kg/m2/s" />
<field id="icedrift_heat" long_name="Ice heat drift (conservation check)" unit="W/m2" />
<!-- rheology convergence tests -->
<field id="uice_cvg" long_name="sea ice velocity convergence" standard_name="sea_ice_velocity_convergence" unit="m/s" />
<!-- vp rheology convergence tests -->
<field id="velo_res" long_name="sea ice velocity residual" standard_name="sea_ice_velocity_residual" unit="N/m2" />
<field id="velo_ero" long_name="sea ice velocity error last outer iteration" standard_name="sea_ice_velocity_outer_error" unit="m/s" />
<field id="uice_eri" long_name="uice velocity error last inner iteration" standard_name="sea_ice_u_velocity_inner_error" unit="m/s" />
<field id="vice_eri" long_name="vice velocity error last inner iteration" standard_name="sea_ice_v_velocity_inner_error" unit="m/s" />
<!-- ================= -->
<!-- Add-ons for SIMIP -->
<!-- ================= -->
<field id="icemass_cmip" long_name="Sea-ice mass per area" standard_name="sea_ice_amount" detect_missing_value="true" unit="kg/m2" > icemass * icemask + $missval * (1.-icemask ) </field>
<field id="icethic_cmip" long_name="Sea-ice thickness" standard_name="sea_ice_thickness" detect_missing_value="true" unit="m" > icethic * icemask05 + $missval * (1.-icemask05) </field>
<field id="snwmass_cmip" long_name="Snow mass per area" standard_name="liquid_water_content_of_surface_snow" detect_missing_value="true" unit="kg/m2" > snwmass * icemask + $missval * (1.-icemask ) </field>
<field id="snwthic_cmip" long_name="Snow thickness" standard_name="surface_snow_thickness" detect_missing_value="true" unit="m" > snwthic * icemask05 + $missval * (1.-icemask05) </field>
<field id="iceconc_pct" long_name="Sea-ice area fraction in percent" standard_name="sea_ice_area_fraction_in_percent" unit="%" > iceconc * 100. </field>
<field id="iceage_cmip" long_name="Age of sea ice" standard_name="age_of_sea_ice" detect_missing_value="true" unit="days" > iceage * icemask15 + $missval * (1.-icemask15) </field>
<field id="icesalt_cmip" long_name="Sea ice salinity" standard_name="sea_ice_salinity" detect_missing_value="true" unit="g/kg" > icesalt * icemask + $missval * (1.-icemask ) </field>
<field id="icefrb_cmip" long_name="Sea-ice freeboard" standard_name="sea_ice_freeboard" detect_missing_value="true" unit="m" > icefrb * icemask + $missval * (1.-icemask ) </field>
<!-- heat -->
<field id="icettop_cmip" long_name="Surface temperature of sea ice" standard_name="sea_ice_surface_temperature" detect_missing_value="true" unit="K" > (icettop+273.15) * icemask + $missval * (1.-icemask) </field>
<field id="icetsni_cmip" long_name="Temperature at snow-ice interface" standard_name="sea_ice_snow_interface_temperature" detect_missing_value="true" unit="K" > (icetsni+273.15) * icemask + $missval * (1.-icemask) </field>
<field id="icetbot_cmip" long_name="Temperature at ice-ocean interface" standard_name="sea_ice_bottom_temperature" detect_missing_value="true" unit="K" > (icetbot+273.15) * icemask + $missval * (1.-icemask) </field>
<field id="icehc_cmip" long_name="Sea-ice heat content per unit area" standard_name="integral_of_sea_ice_temperature_wrt_depth_expressed_as_heat_content" detect_missing_value="true" unit="J/m2" > icehc * icemask + $missval * (1.-icemask) </field>
<field id="snwhc_cmip" long_name="Snow-heat content per unit area" standard_name="thermal_energy_content_of_surface_snow" detect_missing_value="true" unit="J/m2" > snwhc * icemask + $missval * (1.-icemask) </field>
<!-- fluxes (mass, heat, salt) -->
<field id="vfxsum_cmip" long_name="Freshwater flux from sea-ice surface" standard_name="freshwater_flux_from_ice_surface" detect_missing_value="true" unit="kg/m2/s" > vfxsum * icemask + $missval * (1.-icemask) </field>
<field id="vfxice_cmip" long_name="Freshwater flux from sea ice" standard_name="freshwater_flux_from_ice" detect_missing_value="true" unit="kg/m2/s" > vfxice * icemask + $missval * (1.-icemask) </field>
<field id="hfxsensib_cmip" long_name="Net sensible heat flux under sea ice" standard_name="ice_ocean_heat_flux" detect_missing_value="true" unit="W/m2" > hfxsensib * icemask + $missval * (1.-icemask) </field>
<field id="hfxcndtop_cmip" long_name="Net conductive heat flux at the ice surface" standard_name="conductive_heat_flux_at_sea_ice_surface" detect_missing_value="true" unit="W/m2" > hfxcndtop * icemask + $missval * (1.-icemask) </field>
<field id="hfxcndbot_cmip" long_name="Net conductive heat flux at the ice bottom" standard_name="conductive_heat_flux_at_sea_ice_bottom" detect_missing_value="true" unit="W/m2" > hfxcndbot * icemask + $missval * (1.-icemask) </field>
<field id="sfxice_cmip" long_name="Salt flux from sea ice" standard_name="salt_flux_from_ice" detect_missing_value="true" unit="kg/m2/s" > sfxice * icemask + $missval * (1.-icemask) </field>
<!-- trends -->
<field id="dmithd" long_name="sea-ice mass change from thermodynamics" standard_name="tendency_of_sea_ice_amount_due_to_thermodynamics" unit="kg/m2/s" />
<field id="dmidyn" long_name="sea-ice mass change from dynamics" standard_name="tendency_of_sea_ice_amount_due_to_dynamics" unit="kg/m2/s" />
<field id="dmiopw" long_name="sea-ice mass change through growth in supercooled open water (frazil)" standard_name="tendency_of_sea_ice_amount_due_to_freezing_in_open_water" unit="kg/m2/s" />
<field id="dmibog" long_name="sea-ice mass change through basal growth" standard_name="tendency_of_sea_ice_amount_due_to_congelation_ice_accumulation" unit="kg/m2/s" />
<field id="dmisni" long_name="sea-ice mass change through snow-to-ice conversion" standard_name="tendency_of_sea_ice_amount_due_to_snow_conversion" unit="kg/m2/s" />
<field id="dmtsub" long_name="snow and sea ice mass change through sublimation" standard_name="tendency_of_snow_and_ice_amount_due_to_sublimation" unit="kg/m2/s" />
<field id="dmssub" long_name="sea-ice mass change through evaporation and sublimation" standard_name="water_evaporation_flux" unit="kg/m2/s" />
<field id="dmisub" long_name="snow mass change through evaporation or sublimation" standard_name="surface_snow_sublimation_flux" unit="kg/m2/s" />
<field id="dmisum" long_name="sea-ice mass change through surface melting" standard_name="tendency_of_sea_ice_amount_due_to_surface_melting" unit="kg/m2/s" />
<field id="dmibom" long_name="sea-ice mass change through bottom melting" standard_name="tendency_of_sea_ice_amount_due_to_basal_melting" unit="kg/m2/s" />
<field id="dmilam" long_name="sea-ice mass change through lateral melting" standard_name="tendency_of_sea_ice_amount_due_to_lateral_melting" unit="kg/m2/s" />
<field id="dmsspr" long_name="snow mass change through snow fall" standard_name="snowfall_flux" unit="kg/m2/s" />
<field id="dmsmel" long_name="snow mass change through melt" standard_name="surface_snow_melt_flux" unit="kg/m2/s" />
<field id="dmsdyn" long_name="snow mass change through advection by sea-ice dynamics" standard_name="tendency_of_snow_mass_due_to_sea_ice_dynamics" unit="kg/m2/s" />
<field id="dmsssi" long_name="snow mass change through snow-to-ice conversion" standard_name="tendency_of_snow_mass_due_to_snow_to_ice_conversion" unit="kg/m2/s" />
<!-- momentum (rheology) -->
<field id="uice_cmip" long_name="X-component of sea ice velocity" standard_name="sea_ice_x_velocity" detect_missing_value="true" unit="m/s" > uice * icemask + $missval * (1.-icemask) </field>
<field id="vice_cmip" long_name="Y-component of sea ice velocity" standard_name="sea_ice_y_velocity" detect_missing_value="true" unit="m/s" > vice * icemask + $missval * (1.-icemask) </field>
<field id="icevel_cmip" long_name="Sea-ice speed" standard_name="sea_ice_speed" detect_missing_value="true" unit="m/s" > icevel * icemask + $missval * (1.-icemask) </field>
<field id="utau_ai_cmip" long_name="X-component of atmospheric stress on sea ice" standard_name="surface_downward_x_stress" detect_missing_value="true" unit="N/m2" > utau_ai * icemask + $missval * (1.-icemask) </field>
<field id="vtau_ai_cmip" long_name="Y-component of atmospheric stress on sea ice" standard_name="surface_downward_y_stress" detect_missing_value="true" unit="N/m2" > vtau_ai * icemask + $missval * (1.-icemask) </field>
<field id="dssh_dx" long_name="Sea-surface tilt term in force balance (x-component)" standard_name="sea_surface_tilt_force_on_sea_ice_x" unit="N/m2" />
<field id="dssh_dy" long_name="Sea-surface tilt term in force balance (y-component)" standard_name="sea_surface_tilt_force_on_sea_ice_y" unit="N/m2" />
<field id="corstrx" long_name="Coriolis force term in force balance (x-component)" standard_name="coriolis_force_on_sea_ice_x" unit="N/m2" />
<field id="corstry" long_name="Coriolis force term in force balance (y-component)" standard_name="coriolis_force_on_sea_ice_y" unit="N/m2" />
<field id="intstrx" long_name="Internal stress term in force balance (x-component)" standard_name="internal_stress_in_sea_ice_x" unit="N/m2" />
<field id="intstry" long_name="Internal stress term in force balance (y-component)" standard_name="internal_stress_in_sea_ice_y" unit="N/m2" />
<!-- momentum (advection) -->
<field id="xmtrpice" long_name="X-component of ice mass transport" standard_name="ice_x_transport" grid_ref="grid_U_2D" unit="kg/s" />
<field id="ymtrpice" long_name="Y-component of ice mass transport" standard_name="ice_y_transport" grid_ref="grid_V_2D" unit="kg/s" />
<field id="xmtrpsnw" long_name="X-component of snw mass transport" standard_name="snw_x_transport" grid_ref="grid_U_2D" unit="kg/s" />
<field id="ymtrpsnw" long_name="Y-component of snw mass transport" standard_name="snw_y_transport" grid_ref="grid_V_2D" unit="kg/s" />
<field id="xatrp" long_name="X-component of ice area transport" standard_name="area_x_transport" grid_ref="grid_U_2D" unit="m2/s" />
<field id="yatrp" long_name="Y-component of ice area transport" standard_name="area_y_transport" grid_ref="grid_V_2D" unit="m2/s" />
<field id="xmtrptot" long_name="X-component of sea-ice mass transport" standard_name="sea_ice_x_transport" grid_ref="grid_U_2D" unit="kg/s" > xmtrpice + xmtrpsnw </field>
<field id="ymtrptot" long_name="Y-component of sea-ice mass transport" standard_name="sea_ice_y_transport" grid_ref="grid_V_2D" unit="kg/s" > ymtrpice + ymtrpsnw </field>
<!-- Ice transport through straits" -->
<field id="xmtrpice_ave" long_name="Monthly average of x-ice mass transport" field_ref="xmtrpice" grid_ref="grid_U_2D" freq_op="1mo" freq_offset="_reset_" > @xmtrpice </field>
<field id="xmtrpice_section" grid_ref="grid_U_scalar" > xmtrpice_ave </field>
<field id="xmtrpice_strait" field_ref="xmtrpice_section" grid_ref="grid_U_4strait_ice" />
<field id="xstrait_mifl" field_ref="xmtrpice_strait" grid_ref="grid_U_4strait_ice_hsum" unit="kg/s" detect_missing_value="true" > this * maskMFO_u_ice </field>
<field id="ymtrpice_ave" long_name="Monthly average of y-ice mass transport" field_ref="ymtrpice" grid_ref="grid_V_2D" freq_op="1mo" freq_offset="_reset_" > @ymtrpice </field>
<field id="ymtrpice_section" grid_ref="grid_V_scalar" > ymtrpice_ave </field>
<field id="ymtrpice_strait" field_ref="ymtrpice_section" grid_ref="grid_V_4strait_ice" />
<field id="ystrait_mifl" field_ref="ymtrpice_strait" grid_ref="grid_V_4strait_ice_hsum" unit="kg/s" detect_missing_value="true" > this * maskMFO_v_ice </field>
<field id="xmtrpsnw_ave" long_name="Monthly average of x-snow mass transport" field_ref="xmtrpsnw" grid_ref="grid_U_2D" freq_op="1mo" freq_offset="_reset_" > @xmtrpsnw </field>
<field id="xmtrpsnw_section" grid_ref="grid_U_scalar" > xmtrpsnw_ave </field>
<field id="xmtrpsnw_strait" field_ref="xmtrpsnw_section" grid_ref="grid_U_4strait_ice" />
<field id="xstrait_msfl" field_ref="xmtrpsnw_strait" grid_ref="grid_U_4strait_ice_hsum" unit="kg/s" detect_missing_value="true" > this * maskMFO_u_ice </field>
<field id="ymtrpsnw_ave" long_name="Monthly average of y-snow mass transport" field_ref="ymtrpsnw" grid_ref="grid_V_2D" freq_op="1mo" freq_offset="_reset_" > @ymtrpsnw </field>
<field id="ymtrpsnw_section" grid_ref="grid_V_scalar" > ymtrpsnw_ave </field>
<field id="ymtrpsnw_strait" field_ref="ymtrpsnw_section" grid_ref="grid_V_4strait_ice" />
<field id="ystrait_msfl" field_ref="ymtrpsnw_strait" grid_ref="grid_V_4strait_ice_hsum" unit="kg/s" detect_missing_value="true" > this * maskMFO_v_ice </field>
<field id="xatrp_ave" long_name="Monthly average of x-ice area transport" field_ref="xatrp" grid_ref="grid_U_2D" freq_op="1mo" freq_offset="_reset_" > @xatrp </field>
<field id="xatrp_section" grid_ref="grid_U_scalar" > xatrp_ave </field>
<field id="xatrp_strait" field_ref="xatrp_section" grid_ref="grid_U_4strait_ice" />
<field id="xstrait_arfl" field_ref="xatrp_strait" grid_ref="grid_U_4strait_ice_hsum" unit="kg/s" detect_missing_value="true" > this * maskMFO_u_ice </field>
<field id="yatrp_ave" long_name="Monthly average of y-ice area transport" field_ref="yatrp" grid_ref="grid_V_2D" freq_op="1mo" freq_offset="_reset_" > @yatrp </field>
<field id="yatrp_section" grid_ref="grid_V_scalar" > yatrp_ave </field>
<field id="yatrp_strait" field_ref="yatrp_section" grid_ref="grid_V_4strait_ice" />
<field id="ystrait_arfl" field_ref="yatrp_strait" grid_ref="grid_V_4strait_ice_hsum" unit="m2/s" detect_missing_value="true" > this * maskMFO_v_ice </field>
<field id="strait_mifl" long_name="Sea ice mass flux through straits" standard_name="sea_ice_mass_transport_across_line" unit="kg/s" freq_op="1mo" grid_ref="grid_4strait_ice" > xstrait_mifl + ystrait_mifl </field>
<field id="strait_msfl" long_name="Snow mass flux through straits" standard_name="snow_mass_transport_across_line" unit="kg/s" freq_op="1mo" grid_ref="grid_4strait_ice" > xstrait_msfl + ystrait_msfl </field>
<field id="strait_arfl" long_name="Sea ice area flux through straits" standard_name="sea_area_mass_transport_across_line" unit="m2/s" freq_op="1mo" grid_ref="grid_4strait_ice" > xstrait_arfl + ystrait_arfl </field>
</field_group> <!-- SBC_2D -->
<!-- categories -->
<field_group id="SBC_3D" grid_ref="grid_T_ncatice_inner" >
<!-- standard ice fields -->
<field id="iceconc_cat" long_name="Sea-ice concentration per category" unit="" />
<field id="icethic_cat" long_name="Sea-ice thickness per category" unit="m" detect_missing_value="true" />
<field id="snwthic_cat" long_name="Snow thickness per category" unit="m" detect_missing_value="true" />
<field id="icesalt_cat" long_name="Sea-Ice Bulk salinity per category" unit="g/kg" detect_missing_value="true" />
<field id="icetemp_cat" long_name="Ice temperature per category" unit="degC" detect_missing_value="true" />
<field id="snwtemp_cat" long_name="Snow temperature per category" unit="degC" detect_missing_value="true" />
<field id="icettop_cat" long_name="Ice/snow surface temperature per category" unit="degC" detect_missing_value="true" />
<field id="iceapnd_cat" long_name="Ice melt pond grid fraction per category" unit="" />
<field id="icevpnd_cat" long_name="Ice melt pond volume per grid area per category" unit="m" />
<field id="icevlid_cat" long_name="Ice melt pond lid volume per category" unit="m" />
<field id="icehpnd_cat" long_name="Ice melt pond thickness per category" unit="m" detect_missing_value="true" />
<field id="icehlid_cat" long_name="Ice melt pond lid thickness per category" unit="m" detect_missing_value="true" />
<field id="iceafpnd_cat" long_name="Ice melt pond ice fraction per category" unit="" />
<field id="iceaepnd_cat" long_name="Ice melt pond effective fraction per category" unit="" />
<field id="icemask_cat" long_name="Fraction of time step with sea ice (per category)" unit="" />
<field id="iceage_cat" long_name="Ice age per category" unit="days" detect_missing_value="true" />
<field id="icebrv_cat" long_name="Brine volume per category" unit="%" detect_missing_value="true" />
<field id="icealb_cat" long_name="Sea-ice or snow albedo" unit="" detect_missing_value="true" />
<!-- Add-ons for SIMIP -->
<field id="iceconc_cat_cmip" long_name="Sea-ice area fractions in thickness categories" standard_name="sea_ice_area_fraction_over_categories" detect_missing_value="true" unit="" > iceconc_cat * icemask_cat + $missval * (1.-icemask_cat) </field>
<field id="icethic_cat_cmip" long_name="Sea-ice thickness in thickness categories" standard_name="sea_ice_thickness_over_categories" detect_missing_value="true" unit="m" > icethic_cat * icemask_cat + $missval * (1.-icemask_cat) </field>
<field id="snwthic_cat_cmip" long_name="Snow thickness in thickness categories" standard_name="snow_thickness_over_categories" detect_missing_value="true" unit="m" > snwthic_cat * icemask_cat + $missval * (1.-icemask_cat) </field>
<field id="iceconc_cat_pct_cmip" long_name="Sea-ice area fractions in thickness categories" standard_name="sea_ice_area_fraction_over_categories" detect_missing_value="true" unit="%" > iceconc_cat*100. * icemask_cat + $missval * (1.-icemask_cat) </field>
<!-- heat diffusion convergence tests -->
<field id="tice_cvgerr" long_name="sea ice temperature convergence error" standard_name="sea_ice_temperature_convergence_err" unit="K" />
<field id="tice_cvgstp" long_name="sea ice temperature convergence iterations" standard_name="sea_ice_temperature_convergence_stp" unit="" />
<!-- salt drainage and flushing sanity checks -->
<field id="cfl_flush" long_name="max CFL during flushing" unit="" />
<field id="cfl_drain" long_name="max CFL during drainage" unit="" />
<field id="sice_flush_neg" long_name="negative sea ice salinity during flushing" detect_missing_value="true" unit="g/kg" />
<field id="sice_drain_neg" long_name="negative sea ice salinity during drainage" detect_missing_value="true" unit="g/kg" />
</field_group> <!-- SBC_3D -->
<!-- layers -->
<field_group id="SBC_4D" grid_ref="grid_T_nlayice_inner" >
<!-- standard ice fields -->
<field id="icesalt_lay" long_name="Sea-Ice salinity per layer" unit="g/kg" detect_missing_value="true" />
<field id="icetemp_lay" long_name="Ice temperature per layer" unit="degC" detect_missing_value="true" />
</field_group> <!-- SBC_4D -->
<!-- scalar variables -->
<field_group id="SBC_scalar" grid_ref="grid_scalar" >
<field id="NH_iceextt" long_name="Sea ice extent North" standard_name="sea_ice_extent_n" unit="1e6_km2" />
<field id="SH_iceextt" long_name="Sea ice extent South" standard_name="sea_ice_extent_s" unit="1e6_km2" />
<field id="NH_icevolu" long_name="Sea ice volume North" standard_name="sea_ice_volume_n" unit="1e3_km3" />
<field id="SH_icevolu" long_name="Sea ice volume South" standard_name="sea_ice_volume_s" unit="1e3_km3" />
<field id="NH_icearea" long_name="Sea ice area North" standard_name="sea_ice_area_n" unit="1e6_km2" />
<field id="SH_icearea" long_name="Sea ice area South" standard_name="sea_ice_area_s" unit="1e6_km2" />
<!-- global forcings -->
<field id="ibgfrcvoltop" long_name="global mean ice/snow forcing at interface ice/snow-atm (volume equivalent ocean volume)" unit="km3" />
<field id="ibgfrcvolbot" long_name="global mean ice/snow forcing at interface ice/snow-ocean (volume equivalent ocean volume)" unit="km3" />
<field id="ibgfrctemtop" long_name="global mean heat on top of ice/snw/ocean-atm " unit="1e20J" />
<field id="ibgfrctembot" long_name="global mean heat below ice (on top of ocean) " unit="1e20J" />
<field id="ibgfrcsal" long_name="global mean ice/snow forcing (salt equivalent ocean volume)" unit="pss*km3" />
<field id="ibgfrchfxtop" long_name="global mean heat flux on top of ice/snw/ocean-atm " unit="W/m2" />
<field id="ibgfrchfxbot" long_name="global mean heat flux below ice (on top of ocean) " unit="W/m2" />
<!-- global drifts (conservation checks) -->
<field id="ibgvolume" long_name="drift in ice/snow volume (equivalent ocean volume)" unit="km3" />
<field id="ibgsaltco" long_name="drift in ice salt content (equivalent ocean volume)" unit="pss*km3" />
<field id="ibgheatco" long_name="drift in ice/snow heat content" unit="1e20J" />
<field id="ibgheatfx" long_name="drift in ice/snow heat flux" unit="W/m2" />
<!-- global contents -->
<field id="ibgvol_tot" long_name="global mean ice volume" unit="km3" />
<field id="sbgvol_tot" long_name="global mean snow volume" unit="km3" />
<field id="ibgarea_tot" long_name="global mean ice area" unit="km2" />
<field id="ibgsalt_tot" long_name="global mean ice salt content" unit="pss*km3" />
<field id="ibgheat_tot" long_name="global mean ice heat content" unit="1e20J" />
<field id="sbgheat_tot" long_name="global mean snow heat content" unit="1e20J" />
<field id="ipbgvol_tot" long_name="global mean ice pond volume" unit="km3" />
<field id="ilbgvol_tot" long_name="global mean ice pond lid volume" unit="km3" />
</field_group>
<!--
============================================================================================================
-->
<!-- output variables for my configuration (example) -->
<field_group id="myvarICE" >
<!-- ice mask -->
<field field_ref="icemask" name="simsk" />
<field field_ref="icemask05" name="simsk05" />
<field field_ref="icemask15" name="simsk15" />
<!-- general -->
<field field_ref="snwvolu" name="snvolu" />
<field field_ref="snwthic" name="snthic" />
<field field_ref="icethic" name="sithic" />
<!--
<field field_ref="icethic" name="sithic_max" operation="maximum" />
<field field_ref="icethic" name="sithic_min" operation="minimum" />
-->
<field field_ref="fasticepres" name="fasticepres" />
<field field_ref="icevolu" name="sivolu" />
<field field_ref="iceconc" name="siconc" />
<field field_ref="icesalt" name="sisali" />
<field field_ref="iceapnd" name="siapnd" />
<field field_ref="iceapeff" name="siapeff" />
<field field_ref="icehpnd" name="sihpnd" />
<field field_ref="icevpnd" name="sivpnd" />
<field field_ref="iceage" name="siage" />
<field field_ref="sst_m" name="sst_m" />
<field field_ref="sss_m" name="sss_m" />
<!-- heat -->
<field field_ref="icetemp" name="sitemp" />
<field field_ref="snwtemp" name="sntemp" />
<field field_ref="icettop" name="sittop" />
<field field_ref="icetbot" name="sitbot" />
<field field_ref="icetsni" name="sitsni" />
<!-- momentum -->
<field field_ref="uice" name="sivelu" />
<field field_ref="vice" name="sivelv" />
<field field_ref="icevel" name="sivelo" />
<field field_ref="utau_ai" name="utau_ai" />
<field field_ref="vtau_ai" name="vtau_ai" />
<field field_ref="utau_oi" name="utau_oi" />
<field field_ref="vtau_oi" name="vtau_oi" />
<!-- drags -->
<field field_ref="Cd_ice" name="Cd_ice" />
<field field_ref="Ch_ice" name="Ch_ice" />
<field field_ref="Ce_ice" name="Ce_ice" />
<field field_ref="drag_io" name="drag_io" />
<field field_ref="drag_io_skin" name="drag_io_skin" />
<field field_ref="drag_io_keel" name="drag_io_keel" />
<field field_ref="drag_io_floe" name="drag_io_floe" />
<field field_ref="drag_ia" name="drag_ia" />
<field field_ref="drag_ia_skin" name="drag_ia_skin" />
<field field_ref="drag_ia_rdg" name="drag_ia_rdg" />
<field field_ref="drag_ia_floe" name="drag_ia_floe" />
<field field_ref="drag_ia_pond" name="drag_ia_pond" />
<!-- rheology -->
<field field_ref="icediv" name="sidive" />
<field field_ref="iceshe" name="sishea" />
<field field_ref="icestr" name="sistre" />
<field field_ref="normstr" name="normstr" />
<field field_ref="sheastr" name="sheastr" />
<field field_ref="sig1_pnorm" name="sig1_pnorm"/>
<field field_ref="sig2_pnorm" name="sig2_pnorm"/>
<field field_ref="icedlt" name="sidelt" />
<!-- heat fluxes -->
<field field_ref="qt_oce_ai" name="qt_oce_ai" />
<field field_ref="qt_atm_oi" name="qt_atm_oi" />
<field field_ref="qtr_ice_top" name="qtr_ice_top"/>
<field field_ref="qtr_ice_bot" name="qtr_ice_bot"/>
<field field_ref="qt_ice" name="qt_ice" />
<field field_ref="qsr_ice" name="qsr_ice" />
<field field_ref="qns_ice" name="qns_ice" />
<field field_ref="qemp_ice" name="qemp_ice" />
<field field_ref="albedo" name="albedo" />
<field field_ref="icealb" name="icealb" />
<field field_ref="hfxcndtop" name="hfxcndtop" />
<field field_ref="hfxcndbot" name="hfxcndbot" />
<field field_ref="hfxsensib" name="hfxsensib" />
<field field_ref="icehc" name="icehc" />
<field field_ref="snwhc" name="snwhc" />
<field field_ref="hfxbog" name="hfxbog" />
<field field_ref="hfxbom" name="hfxbom" />
<field field_ref="hfxsum" name="hfxsum" />
<field field_ref="hfxopw" name="hfxopw" />
<field field_ref="hfxdif" name="hfxdif" />
<field field_ref="hfxsnw" name="hfxsnw" />
<field field_ref="hfxerr" name="hfxerr" />
<field field_ref="hfxthd" name="hfxthd" />
<field field_ref="hfxdyn" name="hfxdyn" />
<field field_ref="hfxres" name="hfxres" />
<field field_ref="hfxsub" name="hfxsub" />
<field field_ref="hfxspr" name="hfxspr" />
<!--
<field field_ref="hfxdhc" name="hfxbudget" operation="average" freq_op="1d" > @qt_atm_oi - @qt_oce_ai -@hfxdhc </field>
-->
<!-- salt fluxes -->
<field field_ref="sfxice" name="sfxice" />
<!-- mass fluxes -->
<field field_ref="vfxice" name="vfxice" />
<field field_ref="vfxsnw" name="vfxsnw" />
<field field_ref="vfxbom" name="vfxbom" />
<field field_ref="vfxbog" name="vfxbog" />
<field field_ref="vfxsum" name="vfxsum" />
<field field_ref="vfxopw" name="vfxopw" />
<field field_ref="vfxlam" name="vfxlam" />
<field field_ref="vfxsni" name="vfxsni" />
<field field_ref="vfxdyn" name="vfxdyn" />
<field field_ref="vfxres" name="vfxres" />
<field field_ref="vfxpnd" name="vfxpnd" />
<field field_ref="vfxsub" name="vfxsub" />
<field field_ref="vfxsub_err" name="vfxsub_err" />
<field field_ref="vfxthin" name="vfxthin" />
</field_group>
<field_group id="myvarICE_cat" >
<!-- categories -->
<field field_ref="icemask_cat" name="simskcat"/>
<field field_ref="snwthic_cat" name="snthicat"/>
<field field_ref="iceconc_cat" name="siconcat"/>
<field field_ref="icethic_cat" name="sithicat"/>
<field field_ref="icesalt_cat" name="sisalcat"/>
<field field_ref="icetemp_cat" name="sitemcat"/>
<field field_ref="snwtemp_cat" name="sntemcat"/>
<field field_ref="icettop_cat" name="sitopcat"/>
</field_group>
<!--============================-->
<!-- CONSERVATION diagnostics -->
<!--============================-->
<field_group id="ICE_globalbudget" grid_ref="grid_scalar" >
<field field_ref="ibgvol_tot" name="ibgvol_tot" />
<field field_ref="sbgvol_tot" name="sbgvol_tot" />
<field field_ref="ibgarea_tot" name="ibgarea_tot" />
<field field_ref="ibgsalt_tot" name="ibgsalt_tot" />
<field field_ref="ibgheat_tot" name="ibgheat_tot" />
<field field_ref="sbgheat_tot" name="sbgheat_tot" />
<field field_ref="ipbgvol_tot" name="ipbgvol_tot" />
<field field_ref="ilbgvol_tot" name="ilbgvol_tot" />
</field_group>
<field_group id="ICE_budget" >
<!-- general -->
<field field_ref="icemask" name="simsk" />
<field field_ref="iceconc" name="siconc" />
<field field_ref="icetemp" name="sitemp" />
<field field_ref="snwtemp" name="sntemp" />
<field field_ref="icettop" name="sittop" />
<field field_ref="icetbot" name="sitbot" />
<!-- heat fluxes -->
<field field_ref="qt_oce_ai" name="qt_oce_ai" />
<field field_ref="qt_atm_oi" name="qt_atm_oi" />
<field field_ref="qtr_ice_top" name="qtr_ice_top"/>
<field field_ref="qtr_ice_bot" name="qtr_ice_bot"/>
<field field_ref="qt_ice" name="qt_ice" />
<field field_ref="qsr_ice" name="qsr_ice" />
<field field_ref="qns_ice" name="qns_ice" />
<field field_ref="qemp_ice" name="qemp_ice" />
<field field_ref="hfxsub" name="hfxsub" />
<field field_ref="hfxspr" name="hfxspr" />
<field field_ref="hfxcndtop" name="hfxcndtop" />
<field field_ref="hfxcndbot" name="hfxcndbot" />
<field field_ref="hfxsensib" name="hfxsensib" />
<field field_ref="hfxmelt" name="hfxmelt" />
<field field_ref="hfxldmelt" name="hfxldmelt" />
<field field_ref="hfxldgrow" name="hfxldgrow" />
<!-- salt fluxes -->
<field field_ref="sfxice" name="sfxice" />
<!-- mass fluxes -->
<field field_ref="vfxice" name="vfxice" />
<field field_ref="vfxsnw" name="vfxsnw" />
<field field_ref="vfxpnd" name="vfxpnd" />
<field field_ref="vfxsub" name="vfxsub" />
<field field_ref="vfxsub_err" name="vfxsub_err" />
<field field_ref="vfxsnw_sub" name="vfxsnw_sub" />
<field field_ref="vfxsnw_pre" name="vfxsnw_pre" />
</field_group>
<!--============================-->
<!-- SIMIP sea ice field groups -->
<!-- Notz et al 2016 -->
<!--============================-->
<!-- SIMIP monthly scalar variables -->
<field_group id="SImon_scalars" grid_ref="grid_scalar" >
<!-- Integrated quantities -->
<field field_ref="NH_iceextt" name="siextentn" />
<field field_ref="SH_iceextt" name="siextents" />
<field field_ref="NH_icevolu" name="sivoln" />
<field field_ref="SH_icevolu" name="sivols" />
<field field_ref="NH_icearea" name="siarean" />
<field field_ref="SH_icearea" name="siareas" />
</field_group>
<!-- SIMIP daily fields -->
<field_group id="SIday_fields" >
<field field_ref="icepres" name="sitimefrac" />
<field field_ref="iceconc_pct" name="siconc" />
<field field_ref="icethic_cmip" name="sithick" />
<field field_ref="snwthic_cmip" name="sisnthick" />
<field field_ref="icettop_cmip" name="sitemptop" />
<field field_ref="uice_cmip" name="siu" />
<field field_ref="vice_cmip" name="siv" />
<field field_ref="icevel_cmip" name="sispeed" />
</field_group>
<!-- SIMIP monthly fields -->
<field_group id="SImon_fields" >
<!-- Sea-ice state variables -->
<field field_ref="icepres" name="sitimefrac" />
<field field_ref="iceconc_pct" name="siconc" />
<field field_ref="icemass_cmip" name="simass" />
<field field_ref="icethic_cmip" name="sithick" />
<field field_ref="icevolu" name="sivol" />
<field field_ref="snwmass_cmip" name="sisnmass" />
<field field_ref="snwthic_cmip" name="sisnthick" />
<!-- additional state variables-->
<field field_ref="icettop_cmip" name="sitemptop" />
<field field_ref="icetsni_cmip" name="sitempsnic" />
<field field_ref="icetbot_cmip" name="sitempbot" />
<field field_ref="iceage_cmip" name="siage" />
<field field_ref="icesalm" name="sisaltmass" />
<field field_ref="icesalt_cmip" name="sisali" />
<field field_ref="icefrb_cmip" name="sifb" />
<field field_ref="icehc_cmip" name="sihc" />
<field field_ref="snwhc_cmip" name="sisnhc" />
<!-- freshwater fluxes -->
<field field_ref="vfxice_cmip" name="siflfwbot" />
<field field_ref="vfxsum_cmip" name="siflfwdrain" />
<!-- area balance -->
<field field_ref="afxthd" name="sidconcth" />
<field field_ref="afxdyn" name="sidconcdyn" />
<!-- mass balance -->
<field field_ref="dmithd" name="sidmassth" />
<field field_ref="dmidyn" name="sidmassdyn" />
<field field_ref="dmiopw" name="sidmassgrowthwat" />
<field field_ref="dmibog" name="sidmassgrowthbot" />
<field field_ref="dmisni" name="sidmasssi" />
<field field_ref="dmisub" name="sidmassevapsubl" />
<field field_ref="dmisum" name="sidmassmelttop" />
<field field_ref="dmibom" name="sidmassmeltbot" />
<field field_ref="dmilam" name="sidmassmeltlat" />
<field field_ref="dmsspr" name="sndmasssnf" />
<field field_ref="dmsmel" name="sndmassmelt" />
<field field_ref="dmssub" name="sndmasssubl" />
<field field_ref="dmsdyn" name="sndmassdyn" />
<field field_ref="dmsssi" name="sndmasssi" />
<!-- heat balance -->
<field field_ref="hfxsensib" name="siflsensupbot" />
<field field_ref="hfxcndtop" name="siflcondtop" />
<field field_ref="hfxcndbot" name="siflcondbot" />
<!-- salt balance -->
<field field_ref="sfxice_cmip" name="siflsaltbot" />
<!-- sea-ice dynamics -->
<field field_ref="uice_cmip" name="siu" />
<field field_ref="vice_cmip" name="siv" />
<field field_ref="icevel_cmip" name="sispeed" />
<field field_ref="utau_ai_cmip" name="sistrxdtop" />
<field field_ref="vtau_ai_cmip" name="sistrydtop" />
<field field_ref="utau_oi" name="sistrxubot" />
<field field_ref="vtau_oi" name="sistryubot" />
<field field_ref="icestr" name="sicompstren" />
<field field_ref="dssh_dx" name="siforcetiltx" />
<field field_ref="dssh_dy" name="siforcetilty" />
<field field_ref="corstrx" name="siforcecoriolx" />
<field field_ref="corstry" name="siforcecorioly" />
<field field_ref="intstrx" name="siforceintstrx" />
<field field_ref="intstry" name="siforceintstry" />
<field field_ref="xmtrptot" name="sidmasstranx" />
<field field_ref="ymtrptot" name="sidmasstrany" />
<field field_ref="normstr" name="sistresave" operation="instant" />
<field field_ref="sheastr" name="sistremax" operation="instant" />
<field field_ref="icediv" name="sidivvel" operation="instant" />
<field field_ref="iceshe" name="sishevel" operation="instant" />
<!-- sea ice fluxes across straits: 2D arrays to be post-processed -->
<field field_ref="xmtrpice" name="simassacrossline_x" />
<field field_ref="ymtrpice" name="simassacrossline_y" />
<field field_ref="xmtrpsnw" name="snmassacrossline_x" />
<field field_ref="ymtrpsnw" name="snmassacrossline_y" />
<field field_ref="xatrp" name="siareaacrossline_x" />
<field field_ref="yatrp" name="siareaacrossline_y" />
<!-- category-dependent fields -->
<field field_ref="iceconc_cat_pct_cmip" name="siitdconc" />
<field field_ref="icethic_cat_cmip" name="siitdthick" />
<field field_ref="snwthic_cat_cmip" name="siitdsnthick" />
</field_group>
</field_group> <!-- SBC -->
</field_definition>
cfgs/X3_ORCA2_ICE_PISCES/EXPREF/field_def_nemo-oce.xml 0 → 100644
View file @ dd59ced6
<?xml version="1.0"?>
<field_definition level="1" prec="4" operation="average" enabled=".TRUE." default_value="1.e20" > <!-- time step automaticaly defined -->
<field_group id="all_ocean" chunking_blocksize_target="3.0">
<!--
=====================================================================================================
= Configurable diagnostics =
=====================================================================================================
-->
<field_group id="diamlr_fields">
<!--
=====================================================================================================
Configuration of multiple-linear-regression analysis (diamlr)
=====================================================================================================
This field group configures diamlr for tidal harmonic analysis of field
ssh: in addition to a regressor for fitting the mean value (diamlr_r101),
it includes the regressors for the analysis of the tidal constituents
that are available in the tidal-forcing implementation (see
./src/OCE/SBC/tide.h90).
-->
<!-- Time -->
<field id="diamlr_time" grid_ref="diamlr_grid_T_2D_inner" prec="8" />
<!-- Regressors for tidal harmonic analysis -->
<field id="diamlr_r001" field_ref="diamlr_time" expr="sin( __TDE_M2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:M2" />
<field id="diamlr_r002" field_ref="diamlr_time" expr="cos( __TDE_M2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:M2" />
<field id="diamlr_r003" field_ref="diamlr_time" expr="sin( __TDE_N2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:N2" />
<field id="diamlr_r004" field_ref="diamlr_time" expr="cos( __TDE_N2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:N2" />
<field id="diamlr_r005" field_ref="diamlr_time" expr="sin( __TDE_2N2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:2N2" />
<field id="diamlr_r006" field_ref="diamlr_time" expr="cos( __TDE_2N2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:2N2" />
<field id="diamlr_r007" field_ref="diamlr_time" expr="sin( __TDE_S2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:S2" />
<field id="diamlr_r008" field_ref="diamlr_time" expr="cos( __TDE_S2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:S2" />
<field id="diamlr_r009" field_ref="diamlr_time" expr="sin( __TDE_K2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:K2" />
<field id="diamlr_r010" field_ref="diamlr_time" expr="cos( __TDE_K2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:K2" />
<field id="diamlr_r011" field_ref="diamlr_time" expr="sin( __TDE_K1_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:K1" />
<field id="diamlr_r012" field_ref="diamlr_time" expr="cos( __TDE_K1_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:K1" />
<field id="diamlr_r013" field_ref="diamlr_time" expr="sin( __TDE_O1_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:O1" />
<field id="diamlr_r014" field_ref="diamlr_time" expr="cos( __TDE_O1_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:O1" />
<field id="diamlr_r015" field_ref="diamlr_time" expr="sin( __TDE_Q1_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:Q1" />
<field id="diamlr_r016" field_ref="diamlr_time" expr="cos( __TDE_Q1_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:Q1" />
<field id="diamlr_r017" field_ref="diamlr_time" expr="sin( __TDE_P1_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:P1" />
<field id="diamlr_r018" field_ref="diamlr_time" expr="cos( __TDE_P1_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:P1" />
<field id="diamlr_r019" field_ref="diamlr_time" expr="sin( __TDE_M4_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:M4" />
<field id="diamlr_r020" field_ref="diamlr_time" expr="cos( __TDE_M4_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:M4" />
<field id="diamlr_r021" field_ref="diamlr_time" expr="sin( __TDE_Mf_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:Mf" />
<field id="diamlr_r022" field_ref="diamlr_time" expr="cos( __TDE_Mf_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:Mf" />
<field id="diamlr_r023" field_ref="diamlr_time" expr="sin( __TDE_Mm_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:Mm" />
<field id="diamlr_r024" field_ref="diamlr_time" expr="cos( __TDE_Mm_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:Mm" />
<field id="diamlr_r025" field_ref="diamlr_time" expr="sin( __TDE_Msqm_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:Msqm" />
<field id="diamlr_r026" field_ref="diamlr_time" expr="cos( __TDE_Msqm_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:Msqm" />
<field id="diamlr_r027" field_ref="diamlr_time" expr="sin( __TDE_Mtm_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:Mtm" />
<field id="diamlr_r028" field_ref="diamlr_time" expr="cos( __TDE_Mtm_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:Mtm" />
<field id="diamlr_r029" field_ref="diamlr_time" expr="sin( __TDE_S1_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:S1" />
<field id="diamlr_r030" field_ref="diamlr_time" expr="cos( __TDE_S1_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:S1" />
<field id="diamlr_r031" field_ref="diamlr_time" expr="sin( __TDE_MU2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:MU2" />
<field id="diamlr_r032" field_ref="diamlr_time" expr="cos( __TDE_MU2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:MU2" />
<field id="diamlr_r033" field_ref="diamlr_time" expr="sin( __TDE_NU2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:NU2" />
<field id="diamlr_r034" field_ref="diamlr_time" expr="cos( __TDE_NU2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:NU2" />
<field id="diamlr_r035" field_ref="diamlr_time" expr="sin( __TDE_L2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:L2" />
<field id="diamlr_r036" field_ref="diamlr_time" expr="cos( __TDE_L2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:L2" />
<field id="diamlr_r037" field_ref="diamlr_time" expr="sin( __TDE_T2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:sin:T2" />
<field id="diamlr_r038" field_ref="diamlr_time" expr="cos( __TDE_T2_omega__ * diamlr_time )" enabled=".TRUE." comment="harmonic:cos:T2" />
<field id="diamlr_r101" field_ref="diamlr_time" expr="diamlr_time^0.0" enabled=".TRUE." comment="mean" />
<!-- Fields selected for regression analysis -->
<field id="diamlr_f001" field_ref="ssh" enabled=".TRUE." />
</field_group>
<!--
============================================================================================================
= definition of all existing variables =
= DO NOT CHANGE =
============================================================================================================
-->
<field_group id="diadetide_fields">
<!--
=====================================================================================================
Weight fields for the computation of daily detided model diagnostics (diadetide)
=====================================================================================================
-->
<field id="diadetide_weight" grid_ref="diadetide_grid_T_2D" enabled=".TRUE." />
<field id="diadetide_weight_grid_T_2D" field_ref="diadetide_weight" grid_ref="diadetide_grid_T_2D" enabled=".TRUE." > this </field>
<field id="diadetide_weight_grid_U_2D" field_ref="diadetide_weight" grid_ref="diadetide_grid_U_2D" enabled=".TRUE." > this </field>
<field id="diadetide_weight_grid_V_2D" field_ref="diadetide_weight" grid_ref="diadetide_grid_V_2D" enabled=".TRUE." > this </field>
<field id="diadetide_weight_grid_T_3D" field_ref="diadetide_weight" grid_ref="diadetide_grid_2D_to_grid_T_3D" enabled=".TRUE." > this </field>
<field id="diadetide_weight_grid_U_3D" field_ref="diadetide_weight" grid_ref="diadetide_grid_2D_to_grid_U_3D" enabled=".TRUE." > this </field>
<field id="diadetide_weight_grid_V_3D" field_ref="diadetide_weight" grid_ref="diadetide_grid_2D_to_grid_V_3D" enabled=".TRUE." > this </field>
<field id="diadetide_weight_grid_W_3D" field_ref="diadetide_weight" grid_ref="diadetide_grid_2D_to_grid_W_3D" enabled=".TRUE." > this </field>
</field_group>
<!--
============================================================================================================
Physical ocean model variables
============================================================================================================
-->
<!-- T grid -->
<field_group id="grid_T" grid_ref="grid_T_2D" >
<field id="e3t" long_name="T-cell thickness" standard_name="cell_thickness" unit="m" grid_ref="grid_T_3D_inner" />
<field id="e3ts" long_name="T-cell thickness" field_ref="e3t" standard_name="cell_thickness" unit="m" grid_ref="grid_T_SFC_inner" />
<field id="e3t_0" long_name="Initial T-cell thickness" standard_name="ref_cell_thickness" unit="m" grid_ref="grid_T_3D_inner" />
<field id="e3tb" long_name="bottom T-cell thickness" standard_name="bottom_cell_thickness" unit="m" grid_ref="grid_T_2D_inner" />
<field id="e3t_300" field_ref="e3t" grid_ref="grid_T_zoom_300_inner" detect_missing_value="true" />
<field id="e3t_vsum300" field_ref="e3t_300" grid_ref="grid_T_vsum_inner" detect_missing_value="true" />
<field id="masscello" long_name="Sea Water Mass per unit area" standard_name="sea_water_mass_per_unit_area" unit="kg/m2" grid_ref="grid_T_3D_inner"/>
<field id="volcello" long_name="Ocean Volume" standard_name="ocean_volume" unit="m3" grid_ref="grid_T_3D_inner"/>
<field id="toce" long_name="temperature" standard_name="sea_water_potential_temperature" unit="degC" grid_ref="grid_T_3D"/>
<field id="toce_e3t" long_name="temperature (thickness weighted)" unit="degC" grid_ref="grid_T_3D" > toce * e3t </field >
<field id="soce" long_name="salinity" standard_name="sea_water_practical_salinity" unit="1e-3" grid_ref="grid_T_3D"/>
<field id="soce_e3t" long_name="salinity (thickness weighted)" unit="1e-3" grid_ref="grid_T_3D" > soce * e3t </field >
<field id="toce_e3t_300" field_ref="toce_e3t" unit="degree_C" grid_ref="grid_T_zoom_300" detect_missing_value="true" />
<field id="toce_e3t_vsum300" field_ref="toce_e3t_300" unit="degress_C*m" grid_ref="grid_T_vsum" detect_missing_value="true" />
<field id="toce_vmean300" field_ref="toce_e3t_vsum300" unit="degree_C" grid_ref="grid_T_vsum" detect_missing_value="true" > toce_e3t_vsum300/e3t_vsum300 </field>
<!-- AGRIF sponge -->
<field id="agrif_spt" long_name=" AGRIF t-sponge coefficient" unit=" " />
<!-- additions to diawri.F90 -->
<field id="sssgrad" long_name="module of surface salinity gradient" unit="1e-3/m" grid_ref="grid_T_2D_inner" />
<field id="sssgrad2" long_name="square of module of surface salinity gradient" unit="1e-6/m2" grid_ref="grid_T_2D_inner" />
<field id="ke" long_name="kinetic energy" standard_name="specific_kinetic_energy_of_sea_water" unit="m2/s2" grid_ref="grid_T_3D_inner" />
<field id="ke_int" long_name="vertical integration of kinetic energy" unit="m3/s2" grid_ref="grid_T_2D_inner" />
<field id="taubot" long_name="bottom stress module" unit="N/m2" grid_ref="grid_T_2D_inner" />
<!-- t-eddy viscosity coefficients (ldfdyn) -->
<field id="ahmt_2d" long_name=" surface t-eddy viscosity coefficient" unit="m2/s or m4/s" />
<field id="ahmt_3d" long_name=" 3D t-eddy viscosity coefficient" unit="m2/s or m4/s" grid_ref="grid_T_3D"/>
<field id="sst" long_name="Bulk sea surface temperature" standard_name="bulk_sea_surface_temperature" unit="degC" />
<field id="sss" long_name="sea surface salinity" standard_name="sea_surface_salinity" unit="1e-3" />
<field id="sst2" long_name="square of sea surface temperature" standard_name="square_of_sea_surface_temperature" unit="degC2" > sst * sst </field >
<field id="sss2" long_name="square of sea surface salinity" unit="1e-6" > sss * sss </field >
<field id="sstmax" long_name="max of sea surface temperature" field_ref="sst" operation="maximum" />
<field id="sssmax" long_name="max of sea surface salinity" field_ref="sss" operation="maximum" />
<field id="sstmin" long_name="min of sea surface temperature" field_ref="sst" operation="minimum" />
<field id="sssmin" long_name="min of sea surface salinity" field_ref="sss" operation="minimum" />
<field id="sstgrad" long_name="module of sst gradient" unit="degC/m" grid_ref="grid_T_2D_inner" />
<field id="sstgrad2" long_name="square of module of sst gradient" unit="degC2/m2" grid_ref="grid_T_2D_inner" />
<field id="sbt" long_name="sea bottom temperature" unit="degC" grid_ref="grid_T_2D_inner" />
<field id="sbs" long_name="sea bottom salinity" unit="0.001" grid_ref="grid_T_2D_inner" />
<field id="sst_wl" long_name="Delta SST of warm layer" unit="degC" grid_ref="grid_T_2D_inner" />
<field id="sst_cs" long_name="Delta SST of cool skin" unit="degC" grid_ref="grid_T_2D_inner" />
<field id="tosmint" long_name="vertical integral of temperature times density" standard_name="integral_wrt_depth_of_product_of_density_and_potential_temperature" unit="(kg m2) degree_C" grid_ref="grid_T_2D_inner" />
<field id="somint" long_name="vertical integral of salinity times density" standard_name="integral_wrt_depth_of_product_of_density_and_salinity" unit="(kg m2) x (1e-3)" grid_ref="grid_T_2D_inner" />
<!-- Case EOS = TEOS-10 : output potential temperature -->
<field id="toce_pot" long_name="Sea Water Potential Temperature" standard_name="sea_water_potential_temperature" unit="degC" grid_ref="grid_T_3D_inner"/>
<field id="sst_pot" long_name="potential sea surface temperature" standard_name="sea_surface_temperature" unit="degC" grid_ref="grid_T_2D_inner"/>
<field id="tosmint_pot" long_name="vertical integral of potential temperature times density" standard_name="integral_wrt_depth_of_product_of_density_and_potential_temperature" unit="(kg m2) degree_C" grid_ref="grid_T_2D_inner"/>
<field id="ht" long_name="water column height at T point" standard_name="water_column_height_T" unit="m" />
<field id="ssh" long_name="sea surface height" standard_name="sea_surface_height_above_geoid" unit="m" />
<field id="ssh2" long_name="square of sea surface height" standard_name="square_of_sea_surface_height_above_geoid" unit="m2" > ssh * ssh </field >
<field id="wetdep" long_name="wet depth" standard_name="wet_depth" unit="m" />
<field id="sshmax" long_name="max of sea surface height" field_ref="ssh" operation="maximum" grid_ref="grid_T_2D_inner"/>
<field id="mldkz5" long_name="Turbocline depth (Kz = 5e-4)" standard_name="ocean_mixed_layer_thickness_defined_by_vertical_tracer_diffusivity" unit="m" grid_ref="grid_T_2D_inner" />
<field id="mldr10_1" long_name="Mixed Layer Depth (dsigma = 0.01 wrt 10m)" standard_name="ocean_mixed_layer_thickness_defined_by_sigma_theta" unit="m" grid_ref="grid_T_2D_inner" />
<field id="mldr10_1max" long_name="Max of Mixed Layer Depth (dsigma = 0.01 wrt 10m)" field_ref="mldr10_1" operation="maximum" grid_ref="grid_T_2D_inner" />
<field id="mldr10_1min" long_name="Min of Mixed Layer Depth (dsigma = 0.01 wrt 10m)" field_ref="mldr10_1" operation="minimum" grid_ref="grid_T_2D_inner" />
<field id="heatc" long_name="Heat content vertically integrated" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" grid_ref="grid_T_2D_inner" />
<field id="saltc" long_name="Salt content vertically integrated" unit="PSU*kg/m2" grid_ref="grid_T_2D_inner" />
<field id="salt2c" long_name="square of Salt content vertically integrated" unit="PSU2*kg/m2" grid_ref="grid_T_2D_inner" />
<!-- EOS -->
<field id="alpha" long_name="thermal expansion" unit="degC-1" grid_ref="grid_T_3D" />
<field id="beta" long_name="haline contraction" unit="1e3" grid_ref="grid_T_3D" />
<field id="rhop" long_name="potential density (sigma0)" standard_name="sea_water_sigma_theta" unit="kg/m3" grid_ref="grid_T_3D" />
<!-- Energy - horizontal divergence -->
<field id="sKE" long_name="surface kinetic energy" standard_name="specific_kinetic_energy_of_sea_water" unit="m2/s2" grid_ref="grid_T_2D_inner" />
<field id="hdiv" long_name="horizontal divergence" unit="s-1" grid_ref="grid_T_3D_inner" />
<!-- variables available with MLE -->
<field id="Lf_NHpf" long_name="MLE: Lf = N H / f" unit="m" grid_ref="grid_T_2D_inner" />
<!-- next variables available with ln_zad_Aimp=.true. -->
<field id="Courant" long_name="Courant number" unit="#" grid_ref="grid_T_3D_inner" />
<field id="wimp" long_name="Implicit vertical velocity" unit="m/s" grid_ref="grid_T_3D_inner" />
<field id="wexp" long_name="Explicit vertical velocity" unit="m/s" grid_ref="grid_T_3D" />
<field id="wi_cff" long_name="Fraction of implicit vertical velocity" unit="#" grid_ref="grid_T_3D" />
<field id="Aimp_loc" long_name="Locations of columns with active adaptive-implicit vertical advection" unit="%ts" grid_ref="grid_T_2D_inner" />
<field id="Aimp_Cmx" long_name="Column maximum of Courant number with active adaptive-implicit vertical advection" operation="maximum" unit="#" grid_ref="grid_T_2D_inner" />
<field id="Aimp_Cmx_h" long_name="Column maximum of horizontal Courant number with active adaptive-implicit vertical advection" operation="maximum" unit="#" grid_ref="grid_T_2D_inner" />
<field id="Aimp_Cmx_v" long_name="Column maximum of vertical Courant number with active adaptive-implicit vertical advection" operation="maximum" unit="#" grid_ref="grid_T_2D" />
<!-- next variables available with key_diahth -->
<field id="mlddzt" long_name="Thermocline Depth (depth of max dT/dz)" standard_name="depth_at_maximum_upward_derivative_of_sea_water_potential_temperature" unit="m" grid_ref="grid_T_2D_inner" />
<field id="mldr10_3" long_name="Mixed Layer Depth (dsigma = 0.03 wrt 10m)" standard_name="ocean_mixed_layer_thickness_defined_by_sigma_theta" unit="m" grid_ref="grid_T_2D_inner" />
<field id="mldr0_1" long_name="Mixed Layer Depth (dsigma = 0.01 wrt sfc)" standard_name="ocean_mixed_layer_thickness_defined_by_sigma_theta" unit="m" grid_ref="grid_T_2D_inner" />
<field id="mldr0_3" long_name="Mixed Layer Depth (dsigma = 0.03 wrt sfc)" standard_name="ocean_mixed_layer_thickness_defined_by_sigma_theta" unit="m" grid_ref="grid_T_2D_inner" />
<field id="mld_dt02" long_name="Mixed Layer Depth (|dT| = 0.2 wrt 10m)" standard_name="ocean_mixed_layer_thickness_defined_by_temperature" unit="m" grid_ref="grid_T_2D_inner" />
<field id="topthdep" long_name="Top of Thermocline Depth (dT = -0.2 wrt 10m)" standard_name="ocean_mixed_layer_thickness_defined_by_temperature" unit="m" grid_ref="grid_T_2D_inner" />
<field id="pycndep" long_name="Pycnocline Depth (dsigma[dT=-0.2] wrt 10m)" standard_name="ocean_mixed_layer_thickness_defined_by_sigma_theta" unit="m" grid_ref="grid_T_2D_inner" />
<field id="BLT" long_name="Barrier Layer Thickness" unit="m" grid_ref="grid_T_2D_inner" > topthdep - pycndep </field>
<field id="tinv" long_name="Max of vertical invertion of temperature" unit="degC" grid_ref="grid_T_2D_inner" />
<field id="depti" long_name="Depth of max. vert. inv. of temperature" unit="m" grid_ref="grid_T_2D_inner" />
<field id="hc300" long_name="Heat content 0-300m" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" grid_ref="grid_T_2D_inner" />
<field id="hc700" long_name="Heat content 0-700m" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" grid_ref="grid_T_2D_inner" />
<field id="hc2000" long_name="Heat content 0-2000m" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" grid_ref="grid_T_2D_inner" />
<!-- variables available with diaar5 -->
<field id="botpres" long_name="Sea Water Pressure at Sea Floor" standard_name="sea_water_pressure_at_sea_floor" unit="dbar" grid_ref="grid_T_2D_inner" />
<field id="sshdyn" long_name="dynamic sea surface height" standard_name="dynamic_sea_surface_height_above_geoid" unit="m" />
<field id="sshdyn2" long_name="square of dynamic sea surface height" standard_name="dynamic_sea_surface_height_above_geoid_squared" unit="m2" > sshdyn * sshdyn </field>
<field id="tnpeo" long_name="Tendency of ocean potential energy content" unit="W/m2" grid_ref="grid_T_2D_inner" />
<!-- variables available ln_linssh=.FALSE. -->
<field id="tpt_dep" long_name="T-point depth" standard_name="depth_below_geoid" unit="m" grid_ref="grid_T_3D_inner" />
<field id="e3tdef" long_name="T-cell thickness deformation" unit="%" grid_ref="grid_T_3D_inner" />
<!-- variables available with ln_diacfl=.true. -->
<field id="cfl_cu" long_name="u-courant number" unit="#" grid_ref="grid_T_2D_inner" />
<field id="cfl_cv" long_name="v-courant number" unit="#" grid_ref="grid_T_2D_inner" />
<field id="cfl_cw" long_name="w-courant number" unit="#" grid_ref="grid_T_2D_inner" />
<!-- GEOMETRIC fields (requires nn_aei_ijk_t = 32) -->
<field id="eke" long_name="total EKE (EKE+EPE)" unit="m3/s2" />
<field id="trd_eke_adv_ubt" long_name="ubt advective trend of EKE (LHS)" unit="m3/s3" grid_ref="grid_T_2D_inner" />
<field id="trd_eke_adv_wav" long_name="wav advective trend of EKE (LHS)" unit="m3/s3" grid_ref="grid_T_2D_inner" />
<field id="trd_eke_lap" long_name="diffusive trend of EKE (RHS)" unit="m3/s3" grid_ref="grid_T_2D_inner" />
<field id="trd_eke_peS" long_name="PE to EKE source trend (RHS)" unit="m3/s3" grid_ref="grid_T_2D_inner" />
<field id="trd_eke_keS" long_name="KE to EKE source trend (RHS)" unit="m3/s3" grid_ref="grid_T_2D_inner" />
<field id="trd_eke_dis" long_name="dissipation trend of EKE (RHS)" unit="m3/s3" grid_ref="grid_T_2D_inner" />
<!-- variables available with ln_zdfmfc=.true. -->
<field id="mf_Tp" long_name="plume_temperature" standard_name="plume_temperature" unit="degC" grid_ref="grid_T_3D_inner" />
<field id="mf_Sp" long_name="plume_salinity" standard_name="plume_salinity" unit="1e-3" grid_ref="grid_T_3D_inner" />
<field id="mf_mf" long_name="mass flux" standard_name="mf_mass_flux" unit="m" grid_ref="grid_T_3D_inner" />
<!-- fluxes from damping -->
<field id="sflx_dmp_cea" long_name="salt flux due to damping" standard_name="salt_flux_due_to_damping" unit="g/m2/s" grid_ref="grid_T_2D_inner" />
<field id="hflx_dmp_cea" long_name="heat flux due to damping" standard_name="heat_flux_due_to_damping" unit="W/m2" grid_ref="grid_T_2D_inner" />
<!-- * variable related to ice shelf forcing * -->
<!-- * fwf * -->
<field id="fwfisf_cav" long_name="Ice shelf fresh water flux ( from isf to oce )" unit="kg/m2/s" grid_ref="grid_T_2D_inner" />
<field id="fwfisf_par" long_name="Ice shelf fresh water flux ( from isf to oce )" unit="kg/m2/s" grid_ref="grid_T_2D_inner" />
<field id="fwfisf3d_cav" long_name="3d Ice shelf fresh water flux ( from isf to oce )" unit="kg/m2/s" grid_ref="grid_T_3D_inner" />
<field id="fwfisf3d_par" long_name="3d Ice shelf fresh water flux ( from isf to oce )" unit="kg/m2/s" grid_ref="grid_T_3D_inner" />
<!-- * heat fluxes * -->
<field id="qoceisf_cav" long_name="Ice shelf ocean heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_2D_inner" />
<field id="qoceisf_par" long_name="Ice shelf ocean heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_2D_inner" />
<field id="qlatisf_cav" long_name="Ice shelf latent heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_2D_inner" />
<field id="qlatisf_par" long_name="Ice shelf latent heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_2D_inner" />
<field id="qhcisf_cav" long_name="Ice shelf heat content flux of injected water ( from isf to oce )" unit="W/m2" grid_ref="grid_T_2D_inner" />
<field id="qhcisf_par" long_name="Ice shelf heat content flux of injected water ( from isf to oce )" unit="W/m2" grid_ref="grid_T_2D_inner" />
<field id="qoceisf3d_cav" long_name="Ice shelf ocean heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D_inner" />
<field id="qoceisf3d_par" long_name="Ice shelf ocean heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D_inner" />
<field id="qlatisf3d_cav" long_name="Ice shelf latent heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D_inner" />
<field id="qlatisf3d_par" long_name="Ice shelf latent heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D_inner" />
<field id="qhcisf3d_cav" long_name="Ice shelf heat content flux of injected water ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D_inner" />
<field id="qhcisf3d_par" long_name="Ice shelf heat content flux of injected water ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D_inner" />
<field id="qconisf" long_name="Conductive heat flux through the ice shelf ( from isf to oce )" unit="W/m2" grid_ref="grid_T_2D_inner" />
<!-- top boundary layer properties -->
<field id="isftfrz_cav" long_name="freezing point temperature at ocean/isf interface" unit="degC" grid_ref="grid_T_2D_inner" />
<field id="isftfrz_par" long_name="freezing point temperature in the parametrization boundary layer" unit="degC" grid_ref="grid_T_2D_inner" />
<field id="isfthermald_cav" long_name="thermal driving of ice shelf melting" unit="degC" grid_ref="grid_T_2D_inner" />
<field id="isfthermald_par" long_name="thermal driving of ice shelf melting" unit="degC" grid_ref="grid_T_2D_inner" />
<field id="isfgammat" long_name="Ice shelf heat-transfert velocity" unit="m/s" grid_ref="grid_T_2D_inner" />
<field id="isfgammas" long_name="Ice shelf salt-transfert velocity" unit="m/s" grid_ref="grid_T_2D_inner" />
<field id="ttbl_cav" long_name="temperature in Losch tbl" unit="degC" grid_ref="grid_T_2D_inner" />
<field id="ttbl_par" long_name="temperature in the parametrisation boundary layer" unit="degC" grid_ref="grid_T_2D_inner" />
<field id="stbl" long_name="salinity in the Losh tbl" unit="1e-3" grid_ref="grid_T_2D_inner" />
<field id="utbl" long_name="zonal current in the Losh tbl" unit="m/s" grid_ref="grid_T_2D_inner" />
<field id="vtbl" long_name="meridional current in the Losh tbl" unit="m/s" grid_ref="grid_T_2D_inner" />
<field id="isfustar" long_name="ustar at T point used in ice shelf melting" unit="m/s" grid_ref="grid_T_2D_inner" />
</field_group> <!-- grid_T -->
<field_group id="grid_T_iso" domain_ref="grid_T_inner" >
<field id="20d" long_name="Depth of 20C isotherm" standard_name="depth_of_isosurface_of_sea_water_potential_temperature" unit="m" axis_ref="iax_20C" />
<field id="26d" long_name="Depth of 26C isotherm" standard_name="depth_of_isosurface_of_sea_water_potential_temperature" unit="m" axis_ref="iax_26C" />
<field id="28d" long_name="Depth of 28C isotherm" standard_name="depth_of_isosurface_of_sea_water_potential_temperature" unit="m" axis_ref="iax_28C" />
</field_group>
<!-- Tides -->
<field_group id="Tides_T" grid_ref="grid_T_2D" operation="once" >
<!-- Tidal potential -->
<field id="tide_pot" long_name="Total tidal potential" unit="m" />
<field id="tide_pot_M2" long_name="M2 tidal potential" unit="m" />
<field id="tide_pot_N2" long_name="N2 tidal potential" unit="m" />
<field id="tide_pot_2N2" long_name="2N2 tidal potential" unit="m" />
<field id="tide_pot_S2" long_name="S2 tidal potential" unit="m" />
<field id="tide_pot_K2" long_name="K2 tidal potential" unit="m" />
<field id="tide_pot_K1" long_name="K1 tidal potential" unit="m" />
<field id="tide_pot_O1" long_name="O1 tidal potential" unit="m" />
<field id="tide_pot_Q1" long_name="Q1 tidal potential" unit="m" />
<field id="tide_pot_P1" long_name="P1 tidal potential" unit="m" />
<field id="tide_pot_M4" long_name="M4 tidal potential" unit="m" />
<field id="tide_pot_Mf" long_name="Mf tidal potential" unit="m" />
<field id="tide_pot_Mm" long_name="Mm tidal potential" unit="m" />
<field id="tide_pot_Msqm" long_name="Msqm tidal potential" unit="m" />
<field id="tide_pot_Mtm" long_name="Mtm tidal potential" unit="m" />
<field id="tide_pot_S1" long_name="S1 tidal potential" unit="m" />
<field id="tide_pot_MU2" long_name="MU2 tidal potential" unit="m" />
<field id="tide_pot_NU2" long_name="NU2 tidal potential" unit="m" />
<field id="tide_pot_L2" long_name="L2 tidal potential" unit="m" />
<field id="tide_pot_T2" long_name="T2 tidal potential" unit="m" />
</field_group>
<!-- OSMOSIS variables (available with ln_zdfosm=.true.) -->
<field_group id="OSMOSIS_T" grid_ref="grid_T_2D">
<field id="hml" long_name="mixed layr depth" unit="m" />
<field id="hbl" long_name="boundary layer depth" unit="m" />
<field id="dh" long_name="Pycnocline thickness" unit=" m" />
<field id="ibld" long_name="index of boundary layer depth" unit="#" />
<field id="imld" long_name="index of mixed layer depth" unit="#" />
<field id="jp_ext" long_name="flag =1 if pycnocline well resolved" unit="#" />
<field id="j_ddh" long_name="index of mixed layer depth" unit="#" />
<field id="zshear" long_name="shear production of TKE " unit="m^3/s^3" />
<field id="zhbl" long_name="boundary layer depth -grid" unit="m" />
<field id="zhml" long_name="mixed layer depth - grid" unit="m" />
<field id="zdh" long_name="Pycnocline depth - grid" unit=" m" />
<field id="zustke" long_name="magnitude of stokes drift at T-points" unit="m/s" />
<field id="us_x" long_name="i component of active Stokes drift" unit="m/s" />
<field id="us_y" long_name="j component of active Stokes drift" unit="m/s" />
<field id="dstokes" long_name="stokes drift depth scale" unit="m" />
<field id="zwth0" long_name="surface non-local temperature flux" unit="deg m/s" />
<field id="zws0" long_name="surface non-local salinity flux" unit="psu m/s" />
<field id="zwb0" long_name="surface non-local buoyancy flux" unit="m^2/s^3" />
<field id="zwstrc" long_name="convective velocity scale" unit="m/s" />
<field id="zustar" long_name="friction velocity" unit="m/s" />
<field id="zwstrl" long_name="langmuir velocity scale" unit="m/s" />
<field id="zvstr" long_name="mixed velocity scale" unit="m/s" />
<field id="zla" long_name="langmuir number" unit="#" />
<field id="wmp" long_name="wave mean period" unit="s" />
<field id="hsw" long_name="significant wave height" unit="m" />
<field id="wmp_NP" long_name="wave mean period from NP spectrum" unit="s" />
<field id="hsw_NP" long_name="significant wave height from NP spectrum" unit="m" />
<field id="wndm" long_name="U_10" unit="m/s" />
<field id="wind_wave_abs_power" long_name="\rho |U_s| x u*^2" unit="mW" />
<field id="wind_wave_power" long_name="U_s \dot tau" unit="mW" />
<field id="wind_power" long_name="\rho u*^3" unit="mW" />
<!-- interior BL OSMOSIS diagnostics -->
<field id="zwbav" long_name="av turb flux of buoyancy in ml" unit="m^2/s^3" />
<field id="zt_ml" long_name="av T in ml" unit="deg" />
<field id="zhol" long_name="Hoenekker number" unit="#" />
<field id="zws_ent" long_name="entrainment turb flux of S" unit="10^-3 m/s" />
<field id="zwth_ent" long_name="entrainment turb flux of T" unit="deg m/s" />
<field id="zwb_ent" long_name="entrainment turb flux of buoyancy" unit="m^2/s^-3" />
<field id="zdt_bl" long_name="temperature jump at base of BL" unit="deg" />
<field id="zds_bl" long_name="salinity jump at base of BL" unit="10^-3" />
<field id="zdb_bl" long_name="buoyancy jump at base of BL" unit="m/s^2" />
<field id="zdu_bl" long_name="u jump at base of BL" unit="m/s" />
<field id="zdv_bl" long_name="v jump at base of BL" unit="m/s" />
<field id="zdt_ml" long_name="temperature jump at base of ML" unit="deg" />
<field id="zds_ml" long_name="salinity jump at base of ML" unit="10^-3" />
<field id="zdb_ml" long_name="buoyancy jump at base of ML" unit="m/s^2" />
<field id="pb_coup" long_name="bottom coupling velocity" unit="m/s" />
<!-- extra OSMOSIS diagnostics for debugging -->
<field id="zsc_uw_1_0" long_name="zsc u-momentum flux on T after Stokes" unit="m^2/s^2" />
<field id="zsc_uw_1_f" long_name="zsc u-momentum flux on T after Coriolis" unit="m^2/s^2" />
<field id="zsc_vw_1_f" long_name="zsc v-momentum flux on T after Coriolis" unit="m^2/s^2" />
<field id="zsc_uw_2_f" long_name="2nd zsc u-momentum flux on T after Coriolis" unit="m^2/s^2" />
<field id="zsc_vw_2_f" long_name="2nd zsc v-momentum flux on T after Coriolis" unit="m^2/s^2" />
<!-- FK_OSM OSMOSIS diagnostics (require also ln_osm_mle=.true.-->
<field id="hmle" long_name="OBL FK-layer thickness" unit="m" />
<field id="mld_prof" long_name="FK-layer depth index" unit="#" />
<field id="zmld" long_name="target FK-layer thickness" unit="m" />
<field id="zwb_fk" long_name="FK b-flux" unit="m^2 s^-3" />
<field id="zwb_fk_b" long_name="layer averaged FK b-flux" unit="m^2 s^-3" />
<field id="zdiff_mle" long_name="max FK diffusivity in MLE" unit=" 10^-4 m^2 s^-1" />
<field id="zvel_mle" long_name="FK velocity scale in MLE" unit=" m s^-1" />
</field_group>
<field_group id="OSMOSIS_W" grid_ref="grid_W_3D" >
<field id="zviscos" long_name="BL viscosity" unit="m^2/s" />
<field id="ghamt" long_name="non-local temperature flux" unit="deg m/s" />
<field id="ghams" long_name="non-local salinity flux" unit="psu m/s" />
<field id="zdtdz_pyc" long_name="Pycnocline temperature gradient" unit=" deg/m" />
<field id="zdsdz_pyc" long_name="Pycnocline salinity gradient" unit=" 10^-3/m" />
<field id="zdbdz_pyc" long_name="Pycnocline buoyancy gradient" unit=" s^-2" />
<field id="zdudz_pyc" long_name="Pycnocline u gradient" unit=" s^-2" />
<field id="zdvdz_pyc" long_name="Pycnocline v gradient" unit=" s^-2" />
<!-- extra OSMOSIS diagnostics for debugging -->
<field id="ghamu_00" long_name="initial non-local u-momentum flux" unit="m^2/s^2" />
<field id="ghamv_00" long_name="initial non-local v-momentum flux" unit="m^2/s^2" />
<field id="ghamu_0" long_name="after dstokes non-local u-momentum flux" unit="m^2/s^2" />
<field id="ghamu_f" long_name="after Coriolis non-local u-momentum flux" unit="m^2/s^2" />
<field id="ghamv_f" long_name="after Coriolis non-local v-momentum flux" unit="m^2/s^2" />
<field id="ghamu_b" long_name="after buoyancy added non-local u-momentum flux" unit="m^2/s^2" />
<field id="ghamv_b" long_name="after buoyancy added non-local v-momentum flux" unit="m^2/s^2" />
<field id="ghamu_1" long_name="after entrainment non-local u-momentum flux" unit="m^2/s^2" />
<field id="ghamv_1" long_name="after entrainment non-local v-momentum flux" unit="m^2/s^2" />
</field_group>
<field_group id="OSMOSIS_U" grid_ref="grid_U_2D" >
<field id="ghamu" long_name="non-local u-momentum flux" grid_ref="grid_U_3D" unit="m^2/s^2" />
<!-- FK_OSM OSMOSIS diagnostics (require also ln_osm_mle=.true.-->
<field id="zdtdx" long_name="FK T x-gradient" unit=" deg C m^-1" />
<field id="zdsdx" long_name="FK S x-gradient" unit=" 10^-3 m^-1" />
<field id="dbdx_mle" long_name="FK B x-gradient" unit=" s^-2" />
</field_group>
<field_group id="OSMOSIS_V" grid_ref="grid_V_2D" >
<field id="ghamv" long_name="non-local v-momentum flux" grid_ref="grid_V_3D" unit="m^2/s^2" />
<!-- FK_OSM OSMOSIS diagnostics (require also ln_osm_mle=.true.-->
<field id="zdtdy" long_name="FK T y-gradient" unit=" deg C m^-1" />
<field id="zdsdy" long_name="FK S y-gradient" unit=" 10^-3 m^-1" />
<field id="dbdy_mle" long_name="FK B y-gradient" unit=" s^-2" />
</field_group>
<!-- SBC -->
<field_group id="SBC" > <!-- time step automaticaly defined based on nn_fsbc -->
<field_group id="SBC_2D" grid_ref="grid_T_2D_inner" >
<field id="empmr" long_name="Net Upward Water Flux" standard_name="water_flux_out_of_sea_ice_and_sea_water" unit="kg/m2/s" />
<field id="empbmr" long_name="Net Upward Water Flux at pre. tstep" standard_name="water_flux_out_of_sea_ice_and_sea_water" unit="kg/m2/s" />
<field id="emp_oce" long_name="Evap minus Precip over ocean" standard_name="evap_minus_precip_over_sea_water" unit="kg/m2/s" />
<field id="emp_ice" long_name="Evap minus Precip over ice" standard_name="evap_minus_precip_over_sea_ice" unit="kg/m2/s" />
<field id="saltflx" long_name="Downward salt flux" unit="g/m2/s" />
<field id="fwfice" long_name="Ice-Ocean Freshwater Flux (>0 to the ocean)" unit="kg/m2/s" />
<field id="snowpre" long_name="Snow precipitation" standard_name="snowfall_flux" unit="kg/m2/s" />
<field id="runoffs" long_name="River Runoffs" standard_name="water_flux_into_sea_water_from_rivers" unit="kg/m2/s" grid_ref="grid_T_2D" />
<field id="precip" long_name="Total precipitation" standard_name="precipitation_flux" unit="kg/m2/s" />
<field id="wclosea" long_name="closed sea empmr correction" standard_name="closea_empmr" unit="kg/m2/s" />
<field id="qt" long_name="Net Downward Heat Flux" standard_name="surface_downward_heat_flux_in_sea_water" unit="W/m2" />
<field id="qns" long_name="non solar Downward Heat Flux" unit="W/m2" />
<field id="qsr" long_name="Shortwave Radiation" standard_name="net_downward_shortwave_flux_at_sea_water_surface" unit="W/m2" />
<field id="qrp" long_name="Surface Heat Flux: Damping" standard_name="heat_flux_into_sea_water_due_to_newtonian_relaxation" unit="W/m2" />
<field id="qclosea" long_name="closed sea heat content flux" standard_name="closea_heat_content_downward_flux" unit="W/m2" />
<field id="erp" long_name="Surface Water Flux: Damping" standard_name="water_flux_out_of_sea_water_due_to_newtonian_relaxation" unit="kg/m2/s" />
<field id="taum" long_name="wind stress module" standard_name="magnitude_of_surface_downward_stress" unit="N/m2" />
<field id="wspd" long_name="wind speed module" standard_name="wind_speed" unit="m/s" />
<field id="utau" long_name="Wind Stress along i-axis" standard_name="surface_downward_x_stress" unit="N/m2" grid_ref="grid_T_2D" />
<field id="vtau" long_name="Wind Stress along j-axis" standard_name="surface_downward_y_stress" unit="N/m2" grid_ref="grid_T_2D" />
<!-- * variable relative to atmospheric pressure forcing : available with ln_apr_dyn -->
<field id="ssh_ib" long_name="Inverse barometer sea surface height" standard_name="sea_surface_height_correction_due_to_air_pressure_at_low_frequency" unit="m" grid_ref="grid_T_2D" />
<!-- *_oce variables available with ln_blk_clio or ln_blk_core -->
<field id="rho_air" long_name="Air density at 10m above sea surface" standard_name="rho_air_10m" unit="kg/m3" />
<field id="t_skin" long_name="Skin temperature aka SSST" standard_name="skin_temperature" unit="degC" />
<field id="dt_skin" long_name="SSST-SST temperature difference" standard_name="SSST-SST" unit="K" />
<field id="qlw_oce" long_name="Longwave Downward Heat Flux over open ocean" standard_name="surface_net_downward_longwave_flux" unit="W/m2" />
<field id="qsb_oce" long_name="Sensible Downward Heat Flux over open ocean" standard_name="surface_downward_sensible_heat_flux" unit="W/m2" />
<field id="qla_oce" long_name="Latent Downward Heat Flux over open ocean" standard_name="surface_downward_latent_heat_flux" unit="W/m2" />
<field id="evap_oce" long_name="Evaporation over open ocean" standard_name="evaporation" unit="kg/m2/s"/>
<field id="qt_oce" long_name="total flux at ocean surface" standard_name="surface_downward_heat_flux_in_sea_water" unit="W/m2" />
<field id="qsr_oce" long_name="solar heat flux at ocean surface" standard_name="net_downward_shortwave_flux_at_sea_water_surface" unit="W/m2" />
<field id="qns_oce" long_name="non-solar heat flux at ocean surface (including E-P)" unit="W/m2" />
<field id="qemp_oce" long_name="Downward Heat Flux from E-P over open ocean" unit="W/m2" />
<field id="taum_oce" long_name="wind stress module over open ocean" standard_name="magnitude_of_surface_downward_stress" unit="N/m2" />
<field id="utau_oce" long_name="Wind Stress along i-axis over open ocean (T-points)" standard_name="surf_down_x_stress_open_oce_Tpoints" unit="N/m2" grid_ref="grid_T_2D" />
<field id="vtau_oce" long_name="Wind Stress along j-axis over open ocean (T-points)" standard_name="surf_down_y_stress_open_oce_Tpoints" unit="N/m2" grid_ref="grid_T_2D" />
<!-- variables computed by the bulk parameterization algorithms (ln_blk) -->
<field id="Cd_oce" long_name="Drag coefficient over open ocean" standard_name="drag_coefficient_water" unit="" />
<field id="Ce_oce" long_name="Evaporaion coefficient over open ocean" standard_name="evap_coefficient_water" unit="" />
<field id="Ch_oce" long_name="Sensible heat coefficient over open ocean" standard_name="sensible_heat_coefficient_water" unit="" />
<field id="theta_zt" long_name="Potential air temperature at z=zt" standard_name="potential_air_temperature_at_zt" unit="degC" />
<field id="q_zt" long_name="Specific air humidity at z=zt" standard_name="specific_air_humidity_at_zt" unit="kg/kg"/>
<field id="theta_zu" long_name="Potential air temperature at z=zu" standard_name="potential_air_temperature_at_zu" unit="degC" />
<field id="q_zu" long_name="Specific air humidity at z=zu" standard_name="specific_air_humidity_at_zu" unit="kg/kg"/>
<field id="ssq" long_name="Saturation specific humidity of air at z=0" standard_name="surface_air_saturation_spec_humidity" unit="kg/kg"/>
<field id="wspd_blk" long_name="Bulk wind speed at z=zu" standard_name="bulk_wind_speed_at_zu" unit="m/s" />
<!-- ln_blk + key_si3 -->
<field id="Cd_ice" long_name="Drag coefficient over ice" standard_name="drag_coefficient_ice" unit="" />
<field id="Ce_ice" long_name="Evaporaion coefficient over ice" standard_name="evap_coefficient_ice" unit="" />
<field id="Ch_ice" long_name="Sensible heat coefficient over ice" standard_name="sensible_heat_coefficient_ice" unit="" />
<!-- available key_oasis3 -->
<field id="snow_ao_cea" long_name="Snow over ice-free ocean (cell average)" standard_name="snowfall_flux" unit="kg/m2/s" />
<field id="snow_ai_cea" long_name="Snow over sea-ice (cell average)" standard_name="snowfall_flux" unit="kg/m2/s" />
<field id="subl_ai_cea" long_name="Sublimation over sea-ice (cell average)" standard_name="surface_snow_and_ice_sublimation_flux" unit="kg/m2/s" />
<field id="icealb_cea" long_name="Ice albedo (cell average)" standard_name="sea_ice_albedo" unit="1" />
<field id="calving_cea" long_name="Calving" standard_name="water_flux_into_sea_water_from_icebergs" unit="kg/m2/s" />
<field id="iceberg_cea" long_name="Iceberg" standard_name="water_flux_into_sea_water_from_icebergs" unit="kg/m2/s" />
<field id="iceshelf_cea" long_name="Iceshelf" standard_name="water_flux_into_sea_water_from_iceshelf" unit="kg/m2/s" />
<!-- available if key_oasis3 + conservative method -->
<field id="rain" long_name="Liquid precipitation" standard_name="rainfall_flux" unit="kg/m2/s" />
<field id="rain_ao_cea" long_name="Liquid precipitation over ice-free ocean (cell average)" standard_name="rainfall_flux" unit="kg/m2/s" />
<field id="evap_ao_cea" long_name="Evaporation over ice-free ocean (cell average)" standard_name="water_evaporation_flux" unit="kg/m2/s" />
<field id="isnwmlt_cea" long_name="Snow over Ice melting (cell average)" standard_name="surface_snow_melt_flux" unit="kg/m2/s" />
<field id="fsal_virt_cea" long_name="Virtual salt flux due to ice formation (cell average)" standard_name="virtual_salt_flux_into_sea_water_due_to_sea_ice_thermodynamics" unit="kg/m2/s" />
<field id="fsal_real_cea" long_name="Real salt flux due to ice formation (cell average)" standard_name="downward_sea_ice_basal_salt_flux" unit="kg/m2/s" />
<field id="hflx_rain_cea" long_name="heat flux due to rainfall" standard_name="temperature_flux_due_to_rainfall_expressed_as_heat_flux_into_sea_water" unit="W/m2" />
<field id="hflx_evap_cea" long_name="heat flux due to evaporation" standard_name="temperature_flux_due_to_evaporation_expressed_as_heat_flux_out_of_sea_water" unit="W/m2" />
<field id="hflx_subl_cea" long_name="heat flux due to sublimation (from atm. forcings)" standard_name="temperature_flux_due_to_sublimation_expressed_as_heat_flux_out_of_sea_ice" unit="W/m2" />
<field id="hflx_prec_cea" long_name="heat flux due to all precip" standard_name="temperature_flux_due_to_all_precip_expressed_as_heat_flux_into_sea_water" unit="W/m2" />
<field id="hflx_snow_cea" long_name="heat flux due to snow falling" standard_name="heat_flux_onto_ocean_and_ice_due_to_snow_thermodynamics" unit="W/m2" />
<field id="hflx_snow_ai_cea" long_name="heat flux due to snow falling over ice" standard_name="heat_flux_onto_ice_due_to_snow_thermodynamics" unit="W/m2" />
<field id="hflx_snow_ao_cea" long_name="heat flux due to snow falling over ice-free ocean" standard_name="heat_flux_onto_sea_water_due_to_snow_thermodynamics" unit="W/m2" />
<field id="hflx_ice_cea" long_name="heat flux due to ice thermodynamics" standard_name="heat_flux_into_sea_water_due_to_sea_ice_thermodynamics" unit="W/m2" />
<field id="hflx_rnf_cea" long_name="heat flux due to runoffs" standard_name="temperature_flux_due_to_runoff_expressed_as_heat_flux_into_sea_water" unit="W/m2" />
<field id="sflx_rnf_cea" long_name="salt flux due to runoffs" standard_name="salt_flux_due_to_runoffs" unit="g/m2/s" />
<field id="hflx_cal_cea" long_name="heat flux due to calving" standard_name="heat_flux_into_sea_water_due_to_calving" unit="W/m2" />
<field id="hflx_icb_cea" long_name="heat flux due to iceberg" standard_name="heat_flux_into_sea_water_due_to_icebergs" unit="W/m2" />
<field id="hflx_isf_cea" long_name="heat flux due to iceshelf" standard_name="heat_flux_into_sea_water_due_to_iceshelf" unit="W/m2" />
<field id="bicemel_cea" long_name="Rate of Melt at Sea Ice Base (cell average)" standard_name="tendency_of_sea_ice_amount_due_to_basal_melting" unit="kg/m2/s" />
<field id="licepro_cea" long_name="Lateral Sea Ice Growth Rate (cell average)" standard_name="tendency_of_sea_ice_amount_due_to_lateral_growth_of_ice_floes" unit="kg/m2/s" />
<field id="snowmel_cea" long_name="Snow Melt Rate (cell average)" standard_name="surface_snow_melt_flux" unit="kg/m2/s" />
<field id="sntoice_cea" long_name="Snow-Ice Formation Rate (cell average)" standard_name="tendency_of_sea_ice_amount_due_to_snow_conversion" unit="kg/m2/s" />
<field id="ticemel_cea" long_name="Rate of Melt at Upper Surface of Sea Ice (cell average)" standard_name="tendency_of_sea_ice_amount_due_to_surface_melting" unit="kg/m2/s" />
<!-- fluxes from relaxation and freshwater budget -->
<field id="sflx_ssr_cea" long_name="salt flux due to restoring" standard_name="salt_flux_due_to_restoring" unit="g/m2/s" />
<field id="hflx_ssr_cea" long_name="heat flux due to restoring" standard_name="heat_flux_due_to_restoring" unit="W/m2" />
<field id="vflx_ssr_cea" long_name="volume flux due to restoring" standard_name="volume_flux_due_to_restoring" unit="kg/m2/s" />
<field id="hflx_fwb_cea" long_name="heat flux due to fwb" standard_name="heat_flux_due_to_fwb" unit="W/m2" />
<field id="vflx_fwb_cea" long_name="volume flux due to fwb" standard_name="volume_flux_due_to_fwb" unit="kg/m2/s" />
<!-- ice field (nn_ice=1) -->
<field id="ice_cover" long_name="Ice fraction" standard_name="sea_ice_area_fraction" unit="1" grid_ref="grid_T_2D" />
<!-- dilution -->
<field id="emp_x_sst" long_name="Concentration/Dilution term on SST" unit="kg*degC/m2/s" grid_ref="grid_T_2D" />
<field id="emp_x_sss" long_name="Concentration/Dilution term on SSS" unit="kg*1e-3/m2/s" grid_ref="grid_T_2D" />
<field id="rnf_x_sst" long_name="Runoff term on SST" unit="kg*degC/m2/s" grid_ref="grid_T_2D" />
<field id="rnf_x_sss" long_name="Runoff term on SSS" unit="kg*1e-3/m2/s" grid_ref="grid_T_2D" />
<!-- sbcssm variables -->
<field id="sst_m" unit="degC" grid_ref="grid_T_2D" />
<field id="sss_m" unit="psu" grid_ref="grid_T_2D" />
<field id="ssu_m" unit="m/s" grid_ref="grid_T_2D" />
<field id="ssv_m" unit="m/s" grid_ref="grid_T_2D" />
<field id="ssh_m" unit="m" grid_ref="grid_T_2D" />
<field id="e3t_m" unit="m" grid_ref="grid_T_2D" />
<field id="frq_m" unit="-" grid_ref="grid_T_2D" />
</field_group>
</field_group> <!-- SBC -->
<!-- ABL -->
<field_group id="ABL" > <!-- time step automaticaly defined based on nn_fsbc -->
<!-- variables available with ABL on atmospheric T grid-->
<field_group id="grid_ABL3D" grid_ref="grid_TA_3D" >
<field id="u_abl" long_name="ABL i-horizontal velocity" standard_name="abl_x_velocity" unit="m/s" />
<field id="v_abl" long_name="ABL j-horizontal velocity" standard_name="abl_y_velocity" unit="m/s" />
<field id="t_abl" long_name="ABL potential temperature" standard_name="abl_theta" unit="K" />
<field id="q_abl" long_name="ABL specific humidity" standard_name="abl_qspe" unit="kg/kg" />
<!-- debug (to be removed) -->
<field id="u_dta" long_name="DTA i-horizontal velocity" standard_name="dta_x_velocity" unit="m/s" />
<field id="v_dta" long_name="DTA j-horizontal velocity" standard_name="dta_y_velocity" unit="m/s" />
<field id="t_dta" long_name="DTA potential temperature" standard_name="dta_theta" unit="K" />
<field id="q_dta" long_name="DTA specific humidity" standard_name="dta_qspe" unit="kg/kg" />
<field id="u_geo" long_name="GEO i-horizontal velocity" standard_name="geo_x_velocity" unit="m/s" />
<field id="v_geo" long_name="GEO j-horizontal velocity" standard_name="geo_y_velocity" unit="m/s" />
<field id="tke_abl" long_name="ABL turbulent kinetic energy" standard_name="abl_tke" unit="m2/s2" />
<field id="avm_abl" long_name="ABL turbulent viscosity" standard_name="abl_avm" unit="m2/s" />
<field id="avt_abl" long_name="ABL turbulent diffusivity" standard_name="abl_avt" unit="m2/s" />
<field id="mxlm_abl" long_name="ABL master mixing length" standard_name="abl_mxlm" unit="m" />
<field id="mxld_abl" long_name="ABL dissipative mixing length" standard_name="abl_mxld" unit="m" />
</field_group>
<field_group id="grid_ABL2D" grid_ref="grid_TA_2D" >
<field id="pblh" long_name="ABL height" standard_name="abl_height" unit="m" />
<field id="uz1_abl" long_name="ABL i-horizontal velocity" standard_name="abl_x_velocity" unit="m/s" />
<field id="vz1_abl" long_name="ABL j-horizontal velocity" standard_name="abl_y_velocity" unit="m/s" />
<field id="uvz1_abl" long_name="ABL wind speed module" standard_name="abl_wind_speed" unit="m/s" > sqrt( uz1_abl^2 + vz1_abl^2 ) </field>
<field id="tz1_abl" long_name="ABL potential temperature" standard_name="abl_theta" unit="K" />
<field id="qz1_abl" long_name="ABL specific humidity" standard_name="abl_qspe" unit="kg/kg" />
<field id="uz1_dta" long_name="DTA i-horizontal velocity" standard_name="dta_x_velocity" unit="m/s" />
<field id="vz1_dta" long_name="DTA j-horizontal velocity" standard_name="dta_y_velocity" unit="m/s" />
<field id="uvz1_dta" long_name="DTA wind speed module" standard_name="dta_wind_speed" unit="m/s" > sqrt( uz1_dta^2 + vz1_dta^2 ) </field>
<field id="tz1_dta" long_name="DTA potential temperature" standard_name="dta_theta" unit="K" />
<field id="qz1_dta" long_name="DTA specific humidity" standard_name="dta_qspe" unit="kg/kg" />
<!-- debug (to be removed) -->
<field id="uz1_geo" long_name="GEO i-horizontal velocity" standard_name="geo_x_velocity" unit="m/s" />
<field id="vz1_geo" long_name="GEO j-horizontal velocity" standard_name="geo_y_velocity" unit="m/s" />
<field id="uvz1_geo" long_name="GEO wind speed module" standard_name="geo_wind_speed" unit="m/s" > sqrt( uz1_geo^2 + vz1_geo^2 ) </field>
</field_group>
</field_group> <!-- ABL -->
<!-- U grid -->
<field_group id="grid_U" grid_ref="grid_U_2D">
<field id="hu" long_name="water column height at U point" standard_name="water_column_height_U" unit="m" />
<field id="e2u" long_name="U-cell width in meridional direction" standard_name="cell_width" unit="m" />
<field id="e3u" long_name="U-cell thickness" standard_name="cell_thickness" unit="m" grid_ref="grid_U_3D_inner" />
<field id="e3u_0" long_name="Initial U-cell thickness" standard_name="ref_cell_thickness" unit="m" grid_ref="grid_U_3D_inner" />
<field id="uoce" long_name="ocean current along i-axis" standard_name="sea_water_x_velocity" unit="m/s" grid_ref="grid_U_3D" />
<field id="uoce_e3u" long_name="ocean current along i-axis (thickness weighted)" unit="m/s" grid_ref="grid_U_3D" > uoce * e3u </field>
<field id="uoce_e3u_vsum" long_name="ocean current along i-axis * e3u summed on the vertical" field_ref="uoce_e3u" unit="m3/s" grid_ref="grid_U_vsum" />
<field id="uocetr_vsum" long_name="ocean transport along i-axis summed on the vertical" field_ref="e2u" unit="m3/s" > this * uoce_e3u_vsum </field>
<field id="uocetr_vsum_op" long_name="ocean current along i-axis * e3u * e2u summed on the vertical" read_access="true" freq_op="1mo" field_ref="e2u" unit="m3/s" > @uocetr_vsum </field>
<field id="uocetr_vsum_cumul" long_name="ocean current along i-axis * e3u * e2u cumulated from southwest point" freq_offset="_reset_" operation="instant" freq_op="1mo" unit="m3/s" />
<field id="msftbarot" long_name="ocean_barotropic_mass_streamfunction" unit="kg s-1" > uocetr_vsum_cumul * $rho0 </field>
<field id="ssu" long_name="ocean surface current along i-axis" unit="m/s" />
<field id="sbu" long_name="ocean bottom current along i-axis" unit="m/s" grid_ref="grid_U_2D_inner" />
<field id="ubar" long_name="ocean barotropic current along i-axis" unit="m/s" />
<field id="uocetr_eff" long_name="Effective ocean transport along i-axis" standard_name="ocean_volume_x_transport" unit="m3/s" grid_ref="grid_U_3D" />
<field id="ssuww" long_name="ocean surface wind work along i-axis" standard_name="surface_x_wind_work" unit="N/m*s" > utau * ssu </field>
<!-- AGRIF sponge -->
<field id="agrif_spu" long_name=" AGRIF u-sponge coefficient" unit=" " />
<!-- u-eddy diffusivity coefficients (available if ln_traldf_OFF=F) -->
<field id="ahtu_2d" long_name=" surface u-eddy diffusivity coefficient" unit="m2/s or m4/s" />
<field id="ahtu_3d" long_name=" 3D u-EIV coefficient" unit="m2/s or m4/s" grid_ref="grid_U_3D" />
<!-- u-eiv diffusivity coefficients (available if ln_ldfeiv=F) -->
<field id="aeiu_2d" long_name=" surface u-EIV coefficient" unit="m2/s" />
<field id="aeiu_3d" long_name=" 3D u-EIV coefficient" unit="m2/s" grid_ref="grid_U_3D" />
<!-- variables available with MLE (ln_mle=T) -->
<field id="psiu_mle" long_name="MLE streamfunction along i-axis" unit="m3/s" grid_ref="grid_U_3D_inner" />
<!-- uoce_eiv: available EIV (ln_ldfeiv=T) -->
<field id="uoce_eiv" long_name="EIV ocean current along i-axis" standard_name="bolus_sea_water_x_velocity" unit="m/s" grid_ref="grid_U_3D_inner" />
<field id="ueiv_masstr" long_name="EIV Ocean Mass X Transport" standard_name="bolus_ocean_mass_x_transport" unit="kg/s" grid_ref="grid_U_3D_inner" />
<field id="ueiv_heattr" long_name="ocean bolus heat transport along i-axis" standard_name="ocean_heat_x_transport_due_to_bolus_advection" unit="W" grid_ref="grid_U_2D_inner" />
<field id="ueiv_salttr" long_name="ocean bolus salt transport along i-axis" standard_name="ocean_salt_x_transport_due_to_bolus_advection" unit="Kg" grid_ref="grid_U_2D_inner" />
<field id="ueiv_heattr3d" long_name="ocean bolus heat transport along i-axis" standard_name="ocean_heat_x_transport_due_to_bolus_advection" unit="W" grid_ref="grid_U_3D_inner" />
<field id="ueiv_salttr3d" long_name="ocean bolus salt transport along i-axis" standard_name="ocean_salt_x_transport_due_to_bolus_advection" unit="kg" grid_ref="grid_U_3D_inner" />
<!-- uoce_bbl: available with ln_trabbl=T and nn_bbl_adv=1 -->
<field id="uoce_bbl" long_name="BBL ocean current along i-axis" unit="m/s" />
<!-- ahu_bbl : available with ln_trabbl=T and nn_bbl_ldf=1 -->
<field id="ahu_bbl" long_name="BBL diffusive flux along i-axis" unit="m3/s" />
<!-- variables available with WAVE (ln_wave=T) -->
<field id="ustokes" long_name="Stokes Drift Velocity i-axis" standard_name="StokesDrift_x_velocity" unit="m/s" grid_ref="grid_U_3D" />
<field id="ustokes_e3u" long_name="Stokes Drift Velocity i-axis (thickness weighted)" unit="m/s" grid_ref="grid_U_3D" > ustokes * e3u </field>
<!-- variables available with diaar5 -->
<field id="u_masstr" long_name="Ocean Mass X Transport" standard_name="ocean_mass_x_transport" unit="kg/s" grid_ref="grid_U_3D_inner" />
<field id="u_masstr_vint" long_name="vertical integral of ocean eulerian mass transport along i-axis" standard_name="vertical_integral_of_ocean_mass_x_transport" unit="kg/s" grid_ref="grid_U_2D_inner" />
<field id="u_heattr" long_name="ocean eulerian heat transport along i-axis" standard_name="ocean_heat_x_transport" unit="W" grid_ref="grid_U_2D_inner" />
<field id="u_salttr" long_name="ocean eulerian salt transport along i-axis" standard_name="ocean_salt_x_transport" unit="1e-3*kg/s" grid_ref="grid_U_2D_inner" />
<field id="uadv_heattr" long_name="ocean advective heat transport along i-axis" standard_name="advectice_ocean_heat_x_transport" unit="W" grid_ref="grid_U_2D_inner" />
<field id="uadv_salttr" long_name="ocean advective salt transport along i-axis" standard_name="advectice_ocean_salt_x_transport" unit="1e-3*kg/s" grid_ref="grid_U_2D_inner" />
<field id="udiff_heattr" long_name="ocean diffusion heat transport along i-axis" standard_name="ocean_heat_x_transport_due_to_diffusion" unit="W" grid_ref="grid_U_2D_inner" />
<field id="udiff_salttr" long_name="ocean diffusion salt transport along i-axis" standard_name="ocean_salt_x_transport_due_to_diffusion" unit="1e-3*kg/s" grid_ref="grid_U_2D_inner" />
</field_group>
<!-- V grid -->
<field_group id="grid_V" grid_ref="grid_V_2D">
<field id="e1v" long_name="V-cell width in longitudinal direction" standard_name="cell_width" unit="m" />
<field id="e3v" long_name="V-cell thickness" standard_name="cell_thickness" unit="m" grid_ref="grid_V_3D_inner" />
<field id="e3v_0" long_name="Initial V-cell thickness" standard_name="ref_cell_thickness" unit="m" grid_ref="grid_V_3D_inner" />
<field id="hv" long_name="water column height at V point" standard_name="water_column_height_V" unit="m" />
<field id="voce" long_name="ocean current along j-axis" standard_name="sea_water_y_velocity" unit="m/s" grid_ref="grid_V_3D" />
<field id="voce_e3v" long_name="ocean current along j-axis (thickness weighted)" unit="m/s" grid_ref="grid_V_3D" > voce * e3v </field>
<field id="ssv" long_name="ocean surface current along j-axis" unit="m/s" />
<field id="sbv" long_name="ocean bottom current along j-axis" unit="m/s" grid_ref="grid_V_2D_inner" />
<field id="vbar" long_name="ocean barotropic current along j-axis" unit="m/s" />
<field id="vocetr_eff" long_name="Effective ocean transport along j-axis" standard_name="ocean_volume_y_transport" unit="m3/s" grid_ref="grid_V_3D" />
<field id="ssvww" long_name="ocean surface wind work along j-axis" standard_name="surface_y_wind_work" unit="N/m*s" > vtau * ssv </field>
<!-- AGRIF sponge -->
<field id="agrif_spv" long_name=" AGRIF v-sponge coefficient" unit=" " />
<!-- v-eddy diffusivity coefficients (available if ln_traldf_OFF=F) -->
<field id="ahtv_2d" long_name=" surface v-eddy diffusivity coefficient" unit="m2/s or (m4/s)^1/2" />
<field id="ahtv_3d" long_name=" 3D v-eddy diffusivity coefficient" unit="m2/s or (m4/s)^1/2" grid_ref="grid_V_3D" />
<!-- v-eiv diffusivity coefficients (available if ln_ldfeiv=F) -->
<field id="aeiv_2d" long_name=" surface v-EIV coefficient" unit="m2/s" />
<field id="aeiv_3d" long_name=" 3D v-EIV coefficient" unit="m2/s" grid_ref="grid_V_3D" />
<!-- variables available with MLE (ln_mle=T) -->
<field id="psiv_mle" long_name="MLE streamfunction along j-axis" unit="m3/s" grid_ref="grid_V_3D_inner" />
<!-- voce_eiv: available EIV (ln_ldfeiv=T) -->
<field id="voce_eiv" long_name="EIV ocean current along j-axis" standard_name="bolus_sea_water_y_velocity" unit="m/s" grid_ref="grid_V_3D_inner" />
<field id="veiv_masstr" long_name="EIV Ocean Mass Y Transport" standard_name="bolus_ocean_mass_y_transport" unit="kg/s" grid_ref="grid_V_3D_inner" />
<field id="veiv_heattr" long_name="ocean bolus heat transport along j-axis" standard_name="ocean_heat_y_transport_due_to_bolus_advection" unit="W" grid_ref="grid_V_2D_inner" />
<field id="veiv_salttr" long_name="ocean bolus salt transport along j-axis" standard_name="ocean_salt_x_transport_due_to_bolus_advection" unit="Kg" grid_ref="grid_V_2D_inner" />
<field id="veiv_heattr3d" long_name="ocean bolus heat transport along j-axis" standard_name="ocean_heat_y_transport_due_to_bolus_advection" unit="W" grid_ref="grid_V_3D_inner" />
<field id="veiv_salttr3d" long_name="ocean bolus salt transport along j-axis" standard_name="ocean_salt_y_transport_due_to_bolus_advection" unit="kg" grid_ref="grid_V_3D_inner" />
<!-- voce_bbl: available with ln_trabbl=T and nn_bbl_adv=1 -->
<field id="voce_bbl" long_name="BBL ocean current along j-axis" unit="m/s" />
<!-- ahu_bbl : available with ln_trabbl=T and nn_bbl_ldf=1 -->
<field id="ahv_bbl" long_name="BBL diffusive flux along j-axis" unit="m3/s" />
<!-- variables available with WAVE (ln_wave=T) -->
<field id="vstokes" long_name="Stokes Drift Velocity j-axis" standard_name="StokesDrift_y_velocity" unit="m/s" grid_ref="grid_V_3D" />
<field id="vstokes_e3v" long_name="Stokes Drift Velocity j-axis (thickness weighted)" unit="m/s" grid_ref="grid_V_3D" > vstokes * e3v </field>
<!-- variables available with diaar5 -->
<field id="v_masstr" long_name="ocean eulerian mass transport along j-axis" standard_name="ocean_mass_y_transport" unit="kg/s" grid_ref="grid_V_3D_inner" />
<field id="v_heattr" long_name="ocean eulerian heat transport along j-axis" standard_name="ocean_heat_y_transport" unit="W" grid_ref="grid_V_2D_inner" />
<field id="v_salttr" long_name="ocean eulerian salt transport along i-axis" standard_name="ocean_salt_y_transport" unit="1e-3*kg/s" grid_ref="grid_V_2D_inner" />
<field id="vadv_heattr" long_name="ocean advective heat transport along j-axis" standard_name="advectice_ocean_heat_y_transport" unit="W" grid_ref="grid_V_2D_inner" />
<field id="vadv_salttr" long_name="ocean advective salt transport along j-axis" standard_name="advectice_ocean_salt_y_transport" unit="1e-3*kg/s" grid_ref="grid_V_2D_inner" />
<field id="vdiff_heattr" long_name="ocean diffusion heat transport along j-axis" standard_name="ocean_heat_y_transport_due_to_diffusion" unit="W" grid_ref="grid_V_2D_inner" />
<field id="vdiff_salttr" long_name="ocean diffusion salt transport along j-axis" standard_name="ocean_salt_y_transport_due_to_diffusion" unit="1e-3*kg/s" grid_ref="grid_V_2D_inner" />
</field_group>
<!-- W grid -->
<field_group id="grid_W" grid_ref="grid_W_3D">
<field id="e3w" long_name="W-cell thickness" standard_name="cell_thickness" unit="m" grid_ref="grid_W_3D_inner" />
<field id="woce" long_name="ocean vertical velocity" standard_name="upward_sea_water_velocity" unit="m/s" grid_ref="grid_W_3D_inner"/>
<field id="woce_e3w" long_name="ocean vertical velocity * e3w" unit="m2/s" > woce * e3w </field>
<field id="wocetr_eff" long_name="effective ocean vertical transport" unit="m3/s" />
<!-- variables available with WAVE (ln_wave=T) -->
<field id="wstokes" long_name="Stokes Drift vertical velocity" standard_name="upward_StokesDrift_velocity" unit="m/s" />
<!-- woce_eiv: available with EIV (ln_ldfeiv=T) -->
<field id="woce_eiv" long_name="EIV ocean vertical velocity" standard_name="bolus_upward_sea_water_velocity" unit="m/s" grid_ref="grid_W_3D_inner" />
<field id="weiv_masstr" long_name="EIV Upward Ocean Mass Transport" standard_name="bolus_upward_ocean_mass_transport" unit="kg/s" grid_ref="grid_W_3D_inner" />
<!-- currently not coded
<field id="weiv_heattr3d" long_name="ocean bolus heat transport" standard_name="ocean_heat_z_transport_due_to_bolus_advection" unit="W" grid_ref="grid_W_3D_inner" />
<field id="weiv_salttr3d" long_name="ocean bolus salt transport" standard_name="ocean_salt_z_transport_due_to_bolus_advection" unit="kg" grid_ref="grid_W_3D_inner" />
-->
<!-- avt, avm -->
<field id="avt" long_name="vertical eddy diffusivity" standard_name="ocean_vertical_heat_diffusivity" unit="m2/s" grid_ref="grid_W_3D_inner" />
<field id="avt_e3w" long_name="vertical heat diffusivity * e3w" unit="m3/s" > avt * e3w </field>
<field id="logavt" long_name="logarithm of vertical eddy diffusivity" standard_name="ocean_vertical_heat_diffusivity" unit="m2/s" grid_ref="grid_W_3D_inner" />
<field id="avm" long_name="vertical eddy viscosity" standard_name="ocean_vertical_momentum_diffusivity" unit="m2/s" />
<field id="avm_e3w" long_name="vertical eddy viscosity * e3w" unit="m3/s" > avm * e3w </field>
<!-- avs: /= avt with ln_zdfddm=T -->
<field id="avs" long_name="salt vertical eddy diffusivity" standard_name="ocean_vertical_salt_diffusivity" unit="m2/s" grid_ref="grid_W_3D_inner" />
<field id="avs_e3w" long_name="vertical salt diffusivity * e3w" unit="m3/s" > avs * e3w </field>
<field id="logavs" long_name="logarithm of salt vertical eddy diffusivity" standard_name="ocean_vertical_heat_diffusivity" unit="m2/s" grid_ref="grid_W_3D_inner" />
<!-- avt_evd and avm_evd: available with ln_zdfevd -->
<field id="avt_evd" long_name="convective enhancement of vertical diffusivity" standard_name="ocean_vertical_tracer_diffusivity_due_to_convection" unit="m2/s" grid_ref="grid_W_3D_inner" />
<field id="avt_evd_e3w" long_name="convective enhancement to vertical diffusivity * e3w " unit="m3/s" > avt_evd * e3w </field>
<field id="avm_evd" long_name="convective enhancement of vertical viscosity" standard_name="ocean_vertical_momentum_diffusivity_due_to_convection" unit="m2/s" grid_ref="grid_W_3D_inner" />
<!-- mf_app and mf_wp: available with ln_zdfmfc -->
<field id="mf_app" long_name="convective area" standard_name="mf_convective_area" unit="%" grid_ref="grid_W_3D_inner" />
<field id="mf_wp" long_name="convective velocity" standard_name="mf_convective_velo" unit="m/s" grid_ref="grid_W_3D_inner" />
<!-- avt_tide: available with ln_zdfiwm=T -->
<field id="av_ratio" long_name="S over T diffusivity ratio" standard_name="salinity_over_temperature_diffusivity_ratio" unit="1" grid_ref="grid_W_3D_inner" />
<field id="av_wave" long_name="internal wave-induced vertical diffusivity" standard_name="ocean_vertical_tracer_diffusivity_due_to_internal_waves" unit="m2/s" grid_ref="grid_W_3D_inner" />
<field id="bflx_iwm" long_name="internal wave-induced buoyancy flux" standard_name="buoyancy_flux_due_to_internal_waves" unit="W/kg" grid_ref="grid_W_3D_inner" />
<field id="pcmap_iwm" long_name="power consumed by wave-driven mixing" standard_name="vertically_integrated_power_consumption_by_wave_driven_mixing" unit="W/m2" grid_ref="grid_W_2D_inner" />
<field id="emix_iwm" long_name="power density available for mixing" standard_name="power_available_for_mixing_from_breaking_internal_waves" unit="W/kg" grid_ref="grid_W_3D_inner" />
<!-- variables available with diaar5 -->
<field id="w_masstr" long_name="vertical mass transport" standard_name="upward_ocean_mass_transport" unit="kg/s" grid_ref="grid_W_3D_inner" />
<field id="w_masstr2" long_name="square of vertical mass transport" standard_name="square_of_upward_ocean_mass_transport" unit="kg2/s2" grid_ref="grid_W_3D_inner" />
<!-- EOS -->
<field id="bn2" long_name="squared Brunt-Vaisala frequency" unit="s-2" />
<!-- GEOMETRIC fields (requires nn_aei_ijk_t = 32) -->
<field id="aeiv_geom" long_name="3D w-EIV coefficient from GEOMETRIC param." unit="m2/s" />
<field id="rossby_rad" long_name="internal Rossby deformation radius" unit="m" grid_ref="grid_W_2D_inner"/>
<field id="bn2" long_name="squared Brunt-Vaisala frequency" unit="s-1" />
<field id="c1_vert" long_name="1st baroclinic mode phase speed" unit="m/s" grid_ref="grid_W_2D_inner"/>
<field id="c_ros" long_name="long Rossby phase speed" unit="m/s" grid_ref="grid_W_2D"/>
<!-- dissipation diagnostics (note: ediss_k is only available with tke scheme) -->
<field id="avt_k" long_name="vertical eddy diffusivity from closure schemes" standard_name="ocean_vertical_eddy_diffusivity" unit="m2/s" grid_ref="grid_W_3D_inner" />
<field id="avm_k" long_name="vertical eddy viscosity from closure schemes" standard_name="ocean_vertical_eddy_viscosity" unit="m2/s" grid_ref="grid_W_3D_inner" />
<field id="ediss_k" long_name="Kolmogorov energy dissipation (tke scheme)" standard_name="Kolmogorov_energy_dissipation" unit="W/kg" grid_ref="grid_W_3D_inner" />
<field id="eshear_k" long_name="energy source from vertical shear" standard_name="energy_source_from_shear" unit="W/kg" grid_ref="grid_W_3D_inner" />
<field id="estrat_k" long_name="energy sink from stratification" standard_name="energy_sink_from_stratification" unit="W/kg" grid_ref="grid_W_3D_inner" />
</field_group>
<!-- F grid -->
<field_group id="grid_F" grid_ref="grid_F_2D">
<field id="e3f" long_name="F-cell thickness" standard_name="cell_thickness" unit="m" grid_ref="grid_F_3D_inner" />
<field id="e3f_0" long_name="F-cell thickness" standard_name="cell_thickness" unit="m" grid_ref="grid_F_3D_inner" />
<field id="hf" long_name="water column height at F point" standard_name="water_column_height_F" unit="m" />
<field id="ssKEf" long_name="surface kinetic energy at F point" standard_name="specific_kinetic_energy_of_sea_water" unit="m2/s2" grid_ref="grid_F_2D_inner" />
<field id="ssrelvor" long_name="surface relative vorticity" standard_name="relative_vorticity" unit="1/s" grid_ref="grid_F_2D_inner" />
<field id="ssplavor" long_name="surface planetary vorticity" standard_name="planetary_vorticity" unit="1/s" grid_ref="grid_F_2D_inner" />
<field id="ssrelpotvor" long_name="surface relative potential vorticity" standard_name="relpot_vorticity" unit="1/m.s" grid_ref="grid_F_2D_inner" />
<field id="ssabspotvor" long_name="surface absolute potential vorticity" standard_name="abspot_vorticity" unit="1/m.s" grid_ref="grid_F_2D_inner" />
<field id="ssEns" long_name="surface enstrophy" standard_name="enstrophy" unit="1/m2.s2" grid_ref="grid_F_2D_inner" />
</field_group>
<!-- AGRIF sponge -->
<field id="agrif_spf" long_name=" AGRIF f-sponge coefficient" unit=" " />
<!-- f-eddy viscosity coefficients (ldfdyn) -->
<field id="ahmf_2d" long_name=" surface f-eddy viscosity coefficient" unit="m2/s or m4/s" />
<field id="ahmf_3d" long_name=" 3D f-eddy viscosity coefficient" unit="m2/s or m4/s" grid_ref="grid_T_3D"/>
<field_group id="scalar" grid_ref="grid_scalar" >
<!-- Need to have a salinity reference climatological file : sali_ref_clim_monthly -->
<field id="voltot" long_name="global total volume" standard_name="sea_water_volume" unit="m3" />
<field id="sshtot" long_name="global mean ssh" standard_name="global_average_sea_level_change" unit="m" />
<field id="sshsteric" long_name="global mean ssh steric" standard_name="global_average_steric_sea_level_change" unit="m" />
<field id="sshthster" long_name="global mean ssh thermosteric" standard_name="global_average_thermosteric_sea_level_change" unit="m" />
<field id="sshice" long_name="global mean ssh equivalent for ice and snow" standard_name="global_average_ice_snow_sea_level_change" unit="m" />
<field id="masstot" long_name="global total mass" standard_name="sea_water_mass" unit="kg" />
<field id="temptot" long_name="global mean temperature" standard_name="sea_water_potential_temperature" unit="degC" />
<field id="saltot" long_name="global mean salinity" standard_name="sea_water_salinity" unit="1e-3" />
<field id="ssttot" long_name="global mean sea surface temperature" standard_name="sea_water_conservative_temperature" unit="degC" />
<!-- EOS = TEOS-10 -->
<field id="temptot_pot" long_name="global mean potential temperature" standard_name="sea_water_potential_temperature" unit="degC" />
<!-- global diags -->
<field id="bgtemper" long_name="drift in global mean temperature wrt timestep 1" standard_name="change_over_time_in_sea_water_potential_temperature" unit="degC" />
<field id="bgsaline" long_name="drift in global mean salinity wrt timestep 1" standard_name="change_over_time_in_sea_water_practical_salinity" unit="1e-3" />
<field id="bgheatco" long_name="drift in global mean heat content wrt timestep 1" unit="1.e20J" />
<field id="bgheatfx" long_name="drift in global mean heat flux wrt timestep 1" unit="W/m2" />
<field id="bgsaltco" long_name="drift in global mean salt content wrt timestep 1" unit="1e-3*km3" />
<field id="bgvolssh" long_name="drift in global mean ssh volume wrt timestep 1" unit="km3" />
<field id="bgvole3t" long_name="drift in global mean volume variation (e3t) wrt timestep 1" unit="km3" />
<field id="bgfrcvol" long_name="global mean volume from forcing" unit="km3" />
<field id="bgfrctem" long_name="global mean heat content from forcing" unit="1.e20J" />
<field id="bgfrchfx" long_name="global mean heat flux from forcing" unit="W/m2" />
<field id="bgfrcsal" long_name="global mean salt content from forcing" unit="1e-3*km3" />
<field id="bgmistem" long_name="global mean temperature error due to free surface (linssh true)" unit="degC" />
<field id="bgmissal" long_name="global mean salinity error due to free surface (linssh true)" unit="1e-3" />
</field_group>
<!-- transects -->
<field_group id="oce_straits">
<field id="uoce_e3u_ave" long_name="Monthly average of u*e3u" field_ref="uoce_e3u" freq_op="1mo" freq_offset="_reset_" > @uoce_e3u </field>
<field id="uoce_e3u_ave_vsum" long_name="Vertical sum of u*e3u" field_ref="uoce_e3u_ave" grid_ref="grid_U_vsum" />
<field id="uocetr_vsum_section" long_name="Total 2D transport in i-direction" field_ref="uoce_e3u_ave_vsum" grid_ref="grid_U_scalar" detect_missing_value="true"> this * e2u </field>
<field id="uocetr_strait" long_name="Total transport across lines in i-direction" field_ref="uocetr_vsum_section" grid_ref="grid_U_4strait" />
<field id="u_masstr_strait" long_name="Sea water transport across line in i-direction" field_ref="uocetr_strait" grid_ref="grid_U_4strait_hsum" unit="kg/s"> this * maskMFO_u * $rho0 </field>
<field id="voce_e3v_ave" long_name="Monthly average of v*e3v" field_ref="voce_e3v" freq_op="1mo" freq_offset="_reset_" > @voce_e3v </field>
<field id="voce_e3v_ave_vsum" long_name="Vertical sum of v*e3v" field_ref="voce_e3v_ave" grid_ref="grid_V_vsum" />
<field id="vocetr_vsum_section" long_name="Total 2D transport of in j-direction" field_ref="voce_e3v_ave_vsum" grid_ref="grid_V_scalar" detect_missing_value="true"> this * e1v </field>
<field id="vocetr_strait" long_name="Total transport across lines in j-direction" field_ref="vocetr_vsum_section" grid_ref="grid_V_4strait" />
<field id="v_masstr_strait" long_name="Sea water transport across line in j-direction" field_ref="vocetr_strait" grid_ref="grid_V_4strait_hsum" unit="kg/s"> this * maskMFO_v * $rho0 </field>
<field id="masstr_strait" long_name="Sea water transport across line" grid_ref="grid_4strait" > u_masstr_strait + v_masstr_strait </field>
</field_group>
<!-- variables available with iceberg trajectories -->
<field_group id="icbvar" domain_ref="grid_T" >
<field id="berg_melt" long_name="icb melt rate of icebergs" unit="kg/m2/s" />
<field id="berg_melt_hcflx" long_name="icb heat flux to ocean due to melting heat content" unit="J/m2/s" />
<field id="berg_melt_qlat" long_name="icb heat flux to ocean due to melting latent heat" unit="J/m2/s" />
<field id="berg_buoy_melt" long_name="icb buoyancy component of iceberg melt rate" unit="kg/m2/s" />
<field id="berg_eros_melt" long_name="icb erosion component of iceberg melt rate" unit="kg/m2/s" />
<field id="berg_conv_melt" long_name="icb convective component of iceberg melt rate" unit="kg/m2/s" />
<field id="berg_virtual_area" long_name="icb virtual coverage by icebergs" unit="m2" />
<field id="bits_src" long_name="icb mass source of bergy bits" unit="kg/m2/s" />
<field id="bits_melt" long_name="icb melt rate of bergy bits" unit="kg/m2/s" />
<field id="bits_mass" long_name="icb bergy bit density field" unit="kg/m2" />
<field id="berg_mass" long_name="icb iceberg density field" unit="kg/m2" />
<field id="calving" long_name="icb calving mass input" unit="kg/s" />
<field id="berg_floating_melt" long_name="icb melt rate of icebergs + bits" unit="kg/m2/s" />
<field id="berg_real_calving" long_name="icb calving into iceberg class" unit="kg/s" axis_ref="icbcla" />
<field id="berg_stored_ice" long_name="icb accumulated ice mass by class" unit="kg" axis_ref="icbcla" />
</field_group>
<!-- Poleward transport : ptr -->
<field_group id="diaptr" >
<field id="zomsf" long_name="Overturning Stream-Function : All basins" unit="Sv" grid_ref="grid_znl_W_3D" />
<field id="zotem" long_name="Zonal Mean Temperature : All basins" unit="degree_C" grid_ref="grid_znl_T_3D" />
<field id="zosal" long_name="Zonal Mean Salinity : All basins" unit="0.001" grid_ref="grid_znl_T_3D" />
<field id="zosrf" long_name="Zonal Mean Surface : All basins" unit="m2" grid_ref="grid_znl_T_3D" />
<field id="sophtove" long_name="Overturning Heat Transport: All basins" unit="PW" grid_ref="grid_znl_T_2D" />
<field id="sopstove" long_name="Overturning Salt Transport: All basins" unit="Giga g/s" grid_ref="grid_znl_T_2D" />
<field id="sophtbtr" long_name="Barotropic Heat Transport: All basins" unit="PW" grid_ref="grid_znl_T_2D" />
<field id="sopstbtr" long_name="Barotropic Salt Transport: All basins" unit="Giga g/s" grid_ref="grid_znl_T_2D" />
<field id="sophtadv" long_name="Advective Heat Transport: All basins" unit="PW" grid_ref="grid_znl_T_2D" />
<field id="sopstadv" long_name="Advective Salt Transport: All basins" unit="Giga g/s" grid_ref="grid_znl_T_2D" />
<field id="sophtldf" long_name="Diffusive Heat Transport: All basins" unit="PW" grid_ref="grid_znl_T_2D" />
<field id="sopstldf" long_name="Diffusive Salt Transport: All basins" unit="Giga g/s" grid_ref="grid_znl_T_2D" />
<field id="sophtvtr" long_name="Heat Transport : All basins" unit="PW" grid_ref="grid_znl_T_2D" />
<field id="sopstvtr" long_name="Salt Transport : All basins" unit="Giga g/s" grid_ref="grid_znl_T_2D" />
<field id="sophteiv" long_name="Heat Transport from mesoscale eddy advection: All basins" unit="PW" grid_ref="grid_znl_T_2D" />
<field id="sopsteiv" long_name="Salt Transport from mesoscale eddy advection : All basins" unit="Giga g/s" grid_ref="grid_znl_T_2D" />
<field id="sopstadv" long_name="Advective Salt Transport" unit="Giga g/s" grid_ref="grid_znl_T_2D" />
<field id="sophtgyre" long_name="Overturning heat transport due to gyre" field_ref="sophtove" unit="W" grid_ref="grid_znl_T_2D" > sophtvtr - sophtove </field>
<field id="sopstgyre" long_name="Overturning salt transport due to gyre" field_ref="sopstove" unit="kg/s" grid_ref="grid_znl_T_2D" > sophtvtr - sopstove </field>
</field_group>
<field_group id="constant_fields" grid_ref="grid_T_2D" operation="once" >
<field id="bathy" long_name="Sea floor depth below geoid" standard_name="sea_floor_depth_below_geoid" unit="m"/>
<field id="areacello" long_name="Horizontal area of ocean grid cells" standard_name="cell_area" unit="m2" />
<field id="hfgeou" long_name="Upward geothermal heat flux at sea floor" standard_name="upward_geothermal_heat_flux_at_sea_floor" unit="W/m2"/>
<field id="basins" long_name="ocean tracer region masks" standard_name="ocean_tracer_region_masks" unit="none" grid_ref="grid_basin" />
</field_group>
<!--
============================================================================================================
Physical ocean model trend diagnostics : temperature, KE, PE, momentum
============================================================================================================
-->
<!-- variables available with ln_tra_trd -->
<!-- Other trends calculated on even time steps-->
<field_group id="trendT_even" grid_ref="grid_T_3D_inner">
<field id="ttrd_xad" long_name="temperature-trend: i-advection" unit="degC/s" />
<field id="strd_xad" long_name="salinity -trend: i-advection" unit="1e-3/s" />
<field id="ttrd_yad" long_name="temperature-trend: j-advection" unit="degC/s" />
<field id="strd_yad" long_name="salinity -trend: j-advection" unit="1e-3/s" />
<field id="ttrd_zad" long_name="temperature-trend: k-advection" unit="degC/s" />
<field id="strd_zad" long_name="salinity -trend: k-advection" unit="1e-3/s" />
<field id="ttrd_ad" long_name="temperature-trend: advection" standard_name="tendency_of_sea_water_temperature_due_to_advection" unit="degC/s" > sqrt( ttrd_xad^2 + ttrd_yad^2 + ttrd_zad^2 ) </field>
<field id="strd_ad" long_name="salinity -trend: advection" standard_name="tendency_of_sea_water_salinity_due_to_advection" unit="1e-3/s" > sqrt( strd_xad^2 + strd_yad^2 + strd_zad^2 ) </field>
<field id="ttrd_totad" long_name="temperature-trend: total advection" standard_name="tendency_of_sea_water_salinity_due_to_advection" unit="degC/s" />
<field id="strd_totad" long_name="salinity -trend: total advection" standard_name="tendency_of_sea_water_salinity_due_to_advection" unit="1e-3/s" />
<field id="ttrd_sad" long_name="temperature-trend: surface adv. (linssh true)" unit="degC/s" grid_ref="grid_T_2D_inner" />
<field id="strd_sad" long_name="salinity -trend: surface adv. (linssh true)" unit="1e-3/s" grid_ref="grid_T_2D_inner" />
<field id="ttrd_ldf" long_name="temperature-trend: lateral diffusion" standard_name="tendency_of_sea_water_temperature_due_to_horizontal_mixing" unit="degC/s" />
<field id="strd_ldf" long_name="salinity -trend: lateral diffusion" standard_name="tendency_of_sea_water_salinity_due_to_horizontal_mixing" unit="1e-3/s" />
<field id="ttrd_zdf" long_name="temperature-trend: vertical diffusion" standard_name="tendency_of_sea_water_temperature_due_to_vertical_mixing" unit="degC/s" />
<field id="strd_zdf" long_name="salinity -trend: vertical diffusion" standard_name="tendency_of_sea_water_salinity_due_to_vertical_mixing" unit="1e-3/s" />
<field id="ttrd_evd" long_name="temperature-trend: EVD convection" unit="degC/s" />
<field id="strd_evd" long_name="salinity -trend: EVD convection" unit="1e-3/s" />
<!-- ln_traldf_iso=T only (iso-neutral diffusion) -->
<field id="ttrd_iso" long_name="temperature-trend: isopycnal diffusion" unit="degC/s" > ttrd_ldf + ttrd_zdf - ttrd_zdfp </field>
<field id="strd_iso" long_name="salinity -trend: isopycnal diffusion" unit="1e-3/s" > strd_ldf + strd_zdf - strd_zdfp </field>
<field id="ttrd_zdfp" long_name="temperature-trend: pure vert. diffusion" unit="degC/s" />
<field id="strd_zdfp" long_name="salinity -trend: pure vert. diffusion" unit="1e-3/s" />
<!-- ln_zdfosm=T only (OSMOSIS-OBL) -->
<field id="ttrd_osm" long_name="temperature-trend: OSM-OSBL non-local forcing" unit="degC/s" />
<field id="strd_osm" long_name="salinity -trend: OSM-OSBL non-local forcing" unit="1e-3/s" />
<!-- -->
<field id="ttrd_dmp" long_name="temperature-trend: interior restoring" unit="degC/s" />
<field id="strd_dmp" long_name="salinity -trend: interior restoring" unit="1e-3/s" />
<field id="ttrd_bbl" long_name="temperature-trend: bottom boundary layer" unit="degC/s" />
<field id="strd_bbl" long_name="salinity -trend: bottom boundary layer" unit="1e-3/s" />
<field id="ttrd_npc" long_name="temperature-trend: non-penetrative conv." unit="degC/s" />
<field id="strd_npc" long_name="salinity -trend: non-penetrative conv." unit="1e-3/s" />
<field id="ttrd_qns" long_name="temperature-trend: non-solar flux + runoff" unit="degC/s" grid_ref="grid_T_2D_inner" />
<field id="strd_cdt" long_name="salinity -trend: C/D term + runoff" unit="degC/s" grid_ref="grid_T_2D_inner" />
<field id="ttrd_qsr" long_name="temperature-trend: solar penetr. heating" unit="degC/s" />
<field id="ttrd_bbc" long_name="temperature-trend: geothermal heating" unit="degC/s" />
<!-- Thickness weighted versions: -->
<field id="ttrd_xad_e3t" unit="degC/s * m" > ttrd_xad * e3t </field>
<field id="strd_xad_e3t" unit="1e-3/s * m" > strd_xad * e3t </field>
<field id="ttrd_yad_e3t" unit="degC/s * m" > ttrd_yad * e3t </field>
<field id="strd_yad_e3t" unit="1e-3/s * m" > strd_yad * e3t </field>
<field id="ttrd_zad_e3t" unit="degC/s * m" > ttrd_zad * e3t </field>
<field id="strd_zad_e3t" unit="1e-3/s * m" > strd_zad * e3t </field>
<field id="ttrd_ad_e3t" unit="degC/s * m" > ttrd_ad * e3t </field>
<field id="strd_ad_e3t" unit="1e-3/s * m" > strd_ad * e3t </field>
<field id="ttrd_totad_e3t" unit="degC/s * m" > ttrd_totad * e3t </field>
<field id="strd_totad_e3t" unit="1e-3/s * m" > strd_totad * e3t </field>
<field id="ttrd_ldf_e3t" unit="degC/s * m" > ttrd_ldf * e3t </field>
<field id="strd_ldf_e3t" unit="1e-3/s * m" > strd_ldf * e3t </field>
<field id="ttrd_zdf_e3t" unit="degC/s * m" > ttrd_zdf * e3t </field>
<field id="strd_zdf_e3t" unit="1e-3/s * m" > strd_zdf * e3t </field>
<field id="ttrd_evd_e3t" unit="degC/s * m" > ttrd_evd * e3t </field>
<field id="strd_evd_e3t" unit="1e-3/s * m" > strd_evd * e3t </field>
<!-- ln_traldf_iso=T only (iso-neutral diffusion) -->
<field id="ttrd_iso_e3t" unit="degC/s * m" > ttrd_iso * e3t </field>
<field id="strd_iso_e3t" unit="1e-3/s * m" > strd_iso * e3t </field>
<field id="ttrd_zdfp_e3t" unit="degC/s * m" > ttrd_zdfp * e3t </field>
<field id="strd_zdfp_e3t" unit="1e-3/s * m" > strd_zdfp * e3t </field>
<!-- ln_zdfosm=T only (OSMOSIS-OBL) -->
<field id="ttrd_osm_e3t" long_name="temperature-trend: OSM-OSBL non-local forcing" unit="degC/s * m" > ttrd_osm * e3t </field>
<field id="strd_osm_e3t" long_name="salinity -trend: OSM-OSBL non-local forcing" unit="1e-3/s * m" > strd_osm * e3t </field>
<!-- -->
<field id="ttrd_dmp_e3t" unit="degC/s * m" > ttrd_dmp * e3t </field>
<field id="strd_dmp_e3t" unit="1e-3/s * m" > strd_dmp * e3t </field>
<field id="ttrd_bbl_e3t" unit="degC/s * m" > ttrd_bbl * e3t </field>
<field id="strd_bbl_e3t" unit="1e-3/s * m" > strd_bbl * e3t </field>
<field id="ttrd_npc_e3t" unit="degC/s * m" > ttrd_npc * e3t </field>
<field id="strd_npc_e3t" unit="1e-3/s * m" > strd_npc * e3t </field>
<field id="ttrd_qns_e3t" unit="degC/s * m" > ttrd_qns * e3ts </field>
<field id="strd_cdt_e3t" unit="degC/s * m" > strd_cdt * e3ts </field>
<field id="ttrd_qsr_e3t" unit="degC/s * m" > ttrd_qsr * e3t </field>
<field id="ttrd_bbc_e3t" unit="degC/s * m" > ttrd_bbc * e3t </field>
<!-- OMIP layer-integrated trends -->
<field id="ttrd_totad_li" long_name="layer integrated heat-trend: total advection" unit="W/m^2" > ttrd_totad_e3t * 1026.0 * 3991.86795711963 </field>
<field id="strd_totad_li" long_name="layer integrated salt-trend: total advection" unit="kg/(m^2 s)" > strd_totad_e3t * 1026.0 * 0.001 </field>
<field id="ttrd_osm_li" long_name="layer integrated heat-trend: non-local OSM" unit="W/m^2" > ttrd_osm_e3t * 1026.0 * 3991.86795711963 </field>
<field id="strd_osm_li" long_name="layer integrated salt-trend: non-local OSM" unit="kg/(m^2 s)" > strd_osm_e3t * 1026.0 * 0.001 </field>
<field id="ttrd_evd_li" long_name="layer integrated heat-trend: EVD convection" unit="W/m^2" > ttrd_evd_e3t * 1026.0 * 3991.86795711963 </field>
<field id="strd_evd_li" long_name="layer integrated salt-trend: EVD convection" unit="kg/(m^2 s)" > strd_evd_e3t * 1026.0 * 0.001 </field>
<field id="ttrd_iso_li" long_name="layer integrated heat-trend: isopycnal diffusion" unit="W/m^2" > ttrd_iso_e3t * 1026.0 * 3991.86795711963 </field>
<field id="strd_iso_li" long_name="layer integrated salt-trend: isopycnal diffusion" unit="kg/(m^2 s)" > strd_iso_e3t * 1026.0 * 0.001 </field>
<field id="ttrd_zdfp_li" long_name="layer integrated heat-trend: pure vert. diffusion" unit="W/m^2" > ttrd_zdfp_e3t * 1026.0 * 3991.86795711963 </field>
<field id="strd_zdfp_li" long_name="layer integrated salt-trend: pure vert. diffusion" unit="kg/(m^2 s)" > strd_zdfp_e3t * 1026.0 * 0.001 </field>
<field id="ttrd_qns_li" long_name="layer integrated heat-trend: non-solar flux + runoff" unit="W/m^2" grid_ref="grid_T_2D_inner"> ttrd_qns_e3t * 1026.0 * 3991.86795711963 </field>
<field id="ttrd_qsr_li" long_name="layer integrated heat-trend: solar flux" unit="W/m^2" grid_ref="grid_T_3D_inner"> ttrd_qsr_e3t * 1026.0 * 3991.86795711963 </field>
<field id="ttrd_bbl_li" long_name="layer integrated heat-trend: bottom boundary layer " unit="W/m^2" > ttrd_bbl_e3t * 1026.0 * 3991.86795711963 </field>
<field id="strd_bbl_li" long_name="layer integrated salt-trend: bottom boundary layer " unit="kg/(m^2 s)" > strd_bbl_e3t * 1026.0 * 0.001 </field>
</field_group>
<!-- Total trends calculated every time step-->
<field_group id="trendT" grid_ref="grid_T_3D_inner">
<field id="ttrd_tot" long_name="temperature-trend: total model trend" unit="degC/s" />
<field id="strd_tot" long_name="salinity -trend: total model trend" unit="1e-3/s" />
<!-- Thickness weighted versions: -->
<field id="ttrd_tot_e3t" unit="degC/s * m" > ttrd_tot * e3t </field>
<field id="strd_tot_e3t" unit="1e-3/s * m" > strd_tot * e3t </field>
<!-- OMIP layer-integrated total trends -->
<field id="ttrd_tot_li" long_name="layer integrated heat-trend: total model trend :" unit="W/m^2" > ttrd_tot_e3t * 1026.0 * 3991.86795711963 </field>
<field id="strd_tot_li" long_name="layer integrated salt-trend: total model trend :" unit="kg/(m^2 s)" > strd_tot_e3t * 1026.0 * 0.001 </field>
<!-- **** these trends have not been apportioned to all/even/odd ts yet **** -->
<!-- variables available with ln_KE_trd -->
<field id="ketrd_hpg" long_name="ke-trend: hydrostatic pressure gradient" unit="W/s^3" />
<field id="ketrd_spg" long_name="ke-trend: surface pressure gradient" unit="W/s^3" />
<field id="ketrd_spgexp" long_name="ke-trend: surface pressure gradient (explicit)" unit="W/s^3" />
<field id="ketrd_spgflt" long_name="ke-trend: surface pressure gradient (filter)" unit="W/s^3" />
<field id="ssh_flt" long_name="filtered contribution to ssh (dynspg_flt)" unit="m" grid_ref="grid_T_2D_inner" />
<field id="w0" long_name="surface vertical velocity" unit="m/s" grid_ref="grid_T_2D_inner" />
<field id="pw0_exp" long_name="surface pressure flux due to ssh" unit="W/s^2" grid_ref="grid_T_2D_inner" />
<field id="pw0_flt" long_name="surface pressure flux due to filtered ssh" unit="W/s^2" grid_ref="grid_T_2D_inner" />
<field id="ketrd_keg" long_name="ke-trend: KE gradient or hor. adv." unit="W/s^3" />
<field id="ketrd_rvo" long_name="ke-trend: relative vorticity or metric term" unit="W/s^3" />
<field id="ketrd_pvo" long_name="ke-trend: planetary vorticity" unit="W/s^3" />
<field id="ketrd_zad" long_name="ke-trend: vertical advection" unit="W/s^3" />
<field id="ketrd_udx" long_name="ke-trend: U.dx[U]" unit="W/s^3" />
<field id="ketrd_ldf" long_name="ke-trend: lateral diffusion" unit="W/s^3" />
<field id="ketrd_zdf" long_name="ke-trend: vertical diffusion" unit="W/s^3" />
<field id="ketrd_tau" long_name="ke-trend: wind stress " unit="W/s^3" grid_ref="grid_T_2D_inner" />
<field id="ketrd_bfr" long_name="ke-trend: bottom friction (explicit)" unit="W/s^3" />
<field id="ketrd_bfri" long_name="ke-trend: bottom friction (implicit)" unit="W/s^3" />
<field id="ketrd_convP2K" long_name="ke-trend: conversion (potential to kinetic)" unit="W/s^3" />
<field id="KE" long_name="kinetic energy: u(n)*u(n+1)/2" unit="W/s^2" />
<!-- variables available with ln_PE_trd -->
<field id="petrd_xad" long_name="pe-trend: i-advection" unit="W/m^3" />
<field id="petrd_yad" long_name="pe-trend: j-advection" unit="W/m^3" />
<field id="petrd_zad" long_name="pe-trend: k-advection" unit="W/m^3" />
<field id="petrd_sad" long_name="pe-trend: surface adv. (linssh true)" unit="W/m^3" grid_ref="grid_T_2D_inner" />
<field id="petrd_ldf" long_name="pe-trend: lateral diffusion" unit="W/m^3" />
<field id="petrd_zdf" long_name="pe-trend: vertical diffusion" unit="W/m^3" />
<field id="petrd_zdfp" long_name="pe-trend: pure vert. diffusion" unit="W/m^3" />
<field id="petrd_dmp" long_name="pe-trend: interior restoring" unit="W/m^3" />
<field id="petrd_bbl" long_name="pe-trend: bottom boundary layer" unit="W/m^3" />
<field id="petrd_npc" long_name="pe-trend: non-penetrative conv." unit="W/m^3" />
<field id="petrd_nsr" long_name="pe-trend: surface forcing + runoff" unit="W/m^3" />
<field id="petrd_qsr" long_name="pe-trend: solar penetr. heating" unit="W/m^3" />
<field id="petrd_bbc" long_name="pe-trend: geothermal heating" unit="W/m^3" />
<field id="PEanom" long_name="potential energy anomaly" unit="1" />
<field id="alphaPE" long_name="partial deriv. of PEanom wrt T" unit="degC-1" />
<field id="betaPE" long_name="partial deriv. of PEanom wrt S" unit="1e3" />
</field_group>
<field_group id="trendU" grid_ref="grid_U_3D_inner">
<!-- variables available with ln_dyn_trd -->
<field id="utrd_hpg" long_name="i-trend: hydrostatic pressure gradient" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_spg" long_name="i-trend: surface pressure gradient" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_spgexp" long_name="i-trend: surface pressure gradient (explicit)" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_spgflt" long_name="i-trend: surface pressure gradient (filtered)" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_keg" long_name="i-trend: KE gradient or hor. adv." unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_rvo" long_name="i-trend: relative vorticity or metric term" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_pvo" long_name="i-trend: planetary vorticity" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_zad" long_name="i-trend: vertical advection" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_udx" long_name="i-trend: U.dx[U]" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_ldf" long_name="i-trend: lateral diffusion" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_zdf" long_name="i-trend: vertical diffusion" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_tau" long_name="i-trend: wind stress " unit="m/s^2" grid_ref="grid_U_2D_inner" />
<field id="utrd_bfr" long_name="i-trend: bottom friction (explicit)" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_bfri" long_name="i-trend: bottom friction (implicit)" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="utrd_tot" long_name="i-trend: total momentum trend" unit="m/s^2" grid_ref="grid_T_3D_inner" />
</field_group>
<field_group id="trendV" grid_ref="grid_V_3D_inner">
<!-- variables available with ln_dyn_trd -->
<field id="vtrd_hpg" long_name="j-trend: hydrostatic pressure gradient" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_spg" long_name="j-trend: surface pressure gradient" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_spgexp" long_name="j-trend: surface pressure gradient (explicit)" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_spgflt" long_name="j-trend: surface pressure gradient (filtered)" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_keg" long_name="j-trend: KE gradient or hor. adv." unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_rvo" long_name="j-trend: relative vorticity or metric term" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_pvo" long_name="j-trend: planetary vorticity" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_zad" long_name="j-trend: vertical advection" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_vdy" long_name="i-trend: V.dx[V]" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_ldf" long_name="j-trend: lateral diffusion" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_zdf" long_name="j-trend: vertical diffusion" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_tau" long_name="j-trend: wind stress " unit="m/s^2" grid_ref="grid_V_2D_inner" />
<field id="vtrd_bfr" long_name="j-trend: bottom friction (explicit)" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_bfri" long_name="j-trend: bottom friction (implicit)" unit="m/s^2" grid_ref="grid_T_3D_inner" />
<field id="vtrd_tot" long_name="j-trend: total momentum trend" unit="m/s^2" grid_ref="grid_T_3D_inner" />
</field_group>
<!-- shared variables available with TOP interface -->
<field_group id="top_shared" grid_ref="grid_T_3D">
<field id="xeps" long_name="Broadband light attenuation" unit="-" />
<field id="Heup" long_name="Euphotic layer depth" unit="m" grid_ref="grid_T_2D" />
</field_group>
<!--
============================================================================================================
Definitions for iodef_demo.xml
============================================================================================================
-->
<field_group id="TRD" >
<field field_ref="ttrd_totad_li" name="opottempadvect" />
<field field_ref="ttrd_iso_li" name="opottemppmdiff" />
<field field_ref="ttrd_zdfp_li" name="opottempdiff" />
<field field_ref="ttrd_evd_li" name="opottempevd" />
<field field_ref="strd_evd_li" name="osaltevd" />
<field field_ref="ttrd_qns_li" name="opottempqns" />
<field field_ref="ttrd_qsr_li" name="rsdoabsorb" operation="accumulate" />
<field field_ref="strd_totad_li" name="osaltadvect" />
<field field_ref="strd_iso_li" name="osaltpmdiff" />
<field field_ref="strd_zdfp_li" name="osaltdiff" />
</field_group>
<field_group id="mooring" >
<field field_ref="toce" name="thetao" long_name="sea_water_potential_temperature" />
<field field_ref="soce" name="so" long_name="sea_water_salinity" />
<field field_ref="uoce" name="uo" long_name="sea_water_x_velocity" />
<field field_ref="voce" name="vo" long_name="sea_water_y_velocity" />
<field field_ref="woce" name="wo" long_name="sea_water_z_velocity" />
<field field_ref="avt" name="difvho" long_name="ocean_vertical_heat_diffusivity" />
<field field_ref="avm" name="difvmo" long_name="ocean_vertical_momentum_diffusivity" />
<field field_ref="sst" name="tos" long_name="sea_surface_temperature" />
<field field_ref="sst2" name="tossq" long_name="square_of_sea_surface_temperature" />
<field field_ref="sstgrad" name="tosgrad" long_name="module_of_sea_surface_temperature_gradient" />
<field field_ref="sss" name="sos" long_name="sea_surface_salinity" />
<field field_ref="ssh" name="zos" long_name="sea_surface_height_above_geoid" />
<field field_ref="empmr" name="wfo" long_name="water_flux_into_sea_water" />
<field field_ref="qsr" name="rsntds" long_name="surface_net_downward_shortwave_flux" />
<field field_ref="qt" name="tohfls" long_name="surface_net_downward_total_heat_flux" />
<field field_ref="taum" />
<field field_ref="20d" />
<field field_ref="mldkz5" />
<field field_ref="mldr10_1" />
<field field_ref="mldr10_3" />
<field field_ref="mldr0_1" />
<field field_ref="mldr0_3" />
<field field_ref="mld_dt02" />
<field field_ref="topthdep" />
<field field_ref="pycndep" />
<field field_ref="tinv" />
<field field_ref="depti" />
<field field_ref="BLT" name="blt" long_name="barrier_layer_thickness" />
<field field_ref="utau" name="tauuo" long_name="surface_downward_x_stress" />
<field field_ref="vtau" name="tauvo" long_name="surface_downward_y_stress" />
</field_group>
<field_group id="groupT" >
<field field_ref="toce" name="thetao" long_name="sea_water_potential_temperature" />
<field field_ref="soce" name="so" long_name="sea_water_salinity" />
<field field_ref="sst" name="tos" long_name="sea_surface_temperature" />
<field field_ref="sst2" name="tossq" long_name="square_of_sea_surface_temperature" />
<field field_ref="sss" name="sos" long_name="sea_surface_salinity" />
<field field_ref="ssh" name="zos" long_name="sea_surface_height_above_geoid" />
<field field_ref="empmr" name="wfo" long_name="water_flux_into_sea_water" />
<field field_ref="qsr" name="rsntds" long_name="surface_net_downward_shortwave_flux" />
<field field_ref="qt" name="tohfls" long_name="surface_net_downward_total_heat_flux" />
<field field_ref="taum" />
<field field_ref="utau" name="tauuo" long_name="surface_downward_x_stress" />
<field field_ref="vtau" name="tauvo" long_name="surface_downward_y_stress" />
<field field_ref="20d" />
<field field_ref="mldkz5" />
<field field_ref="mldr10_1" />
<field field_ref="mldr10_3" />
<field field_ref="mld_dt02" />
<field field_ref="topthdep" />
<field field_ref="pycndep" />
<field field_ref="tinv" />
<field field_ref="depti" />
<field field_ref="BLT" name="blt" long_name="Barrier Layer Thickness" />
</field_group>
<field_group id="groupU" >
<field field_ref="uoce" name="uo" long_name="sea_water_x_velocity" />
</field_group>
<field_group id="groupV" >
<field field_ref="voce" name="vo" long_name="sea_water_y_velocity" />
</field_group>
<field_group id="groupW" >
<field field_ref="woce" name="wo" long_name="ocean vertical velocity" />
</field_group>
<!-- TMB diagnostic output -->
<field_group id="1h_grid_T_tmb" grid_ref="grid_T_2D" operation="instant">
<field id="top_temp" name="votemper_top" unit="degC" />
<field id="mid_temp" name="votemper_mid" unit="degC" />
<field id="bot_temp" name="votemper_bot" unit="degC" />
<field id="top_sal" name="vosaline_top" unit="psu" />
<field id="mid_sal" name="vosaline_mid" unit="psu" />
<field id="bot_sal" name="vosaline_bot" unit="psu" />
<field id="sshnmasked" name="sossheig" unit="m" />
</field_group>
<field_group id="1h_grid_U_tmb" grid_ref="grid_U_2D" operation="instant">
<field id="top_u" name="vozocrtx_top" unit="m/s" />
<field id="mid_u" name="vozocrtx_mid" unit="m/s" />
<field id="bot_u" name="vozocrtx_bot" unit="m/s" />
<field id="baro_u" name="vobtcrtx" unit="m/s" />
</field_group>
<field_group id="1h_grid_V_tmb" grid_ref="grid_V_2D" operation="instant">
<field id="top_v" name="vomecrty_top" unit="m/s" />
<field id="mid_v" name="vomecrty_mid" unit="m/s" />
<field id="bot_v" name="vomecrty_bot" unit="m/s" />
<field id="baro_v" name="vobtcrty" unit="m/s" />
</field_group>
<!-- 25h diagnostic output -->
<field_group id="25h_grid_T" grid_ref="grid_T_3D_inner" operation="instant">
<field id="temper25h" long_name="potential temperature 25h mean" unit="degC" />
<field id="tempis25h" long_name="insitu temperature 25h mean" unit="degC" />
<field id="salin25h" long_name="salinity 25h mean" unit="psu" />
<field id="ssh25h" long_name="sea surface height 25h mean" grid_ref="grid_T_2D_inner" unit="m" />
</field_group>
<field_group id="25h_grid_U" grid_ref="grid_U_3D_inner" operation="instant" >
<field id="vozocrtx25h" long_name="i current 25h mean" unit="m/s" />
</field_group>
<field_group id="25h_grid_V" grid_ref="grid_V_3D_inner" operation="instant">
<field id="vomecrty25h" long_name="j current 25h mean" unit="m/s" />
</field_group>
<field_group id="25h_grid_W" grid_ref="grid_W_3D_inner" operation="instant">
<field id="vovecrtz25h" long_name="k current 25h mean" unit="m/s" />
<field id="avt25h" long_name="vertical diffusivity25h mean" unit="m2/s" />
<field id="avm25h" long_name="vertical viscosity 25h mean" unit="m2/s" />
<field id="tke25h" long_name="turbulent kinetic energy 25h mean" />
<field id="mxln25h" long_name="mixing length 25h mean" unit="m" />
</field_group>
<!--
============================================================================================================
-->
<!-- output variables for my configuration (example) -->
<field_group id="myvarOCE" >
<!-- grid T -->
<field field_ref="e3t" name="e3t" long_name="vertical scale factor" />
<field field_ref="sst" name="tos" long_name="sea_surface_temperature" />
<field field_ref="sss" name="sos" long_name="sea_surface_salinity" />
<field field_ref="ssh" name="zos" long_name="sea_surface_height_above_geoid" />
<!-- grid U -->
<field field_ref="e3u" name="e3u" long_name="vertical scale factor" />
<field field_ref="ssu" name="uos" long_name="sea_surface_x_velocity" />
<!-- grid V -->
<field field_ref="e3v" name="e3v" long_name="vertical scale factor" />
<field field_ref="ssv" name="vos" long_name="sea_surface_y_velocity" />
</field_group>
<!--============================-->
<!-- CONSERVATION diagnostics -->
<!--============================-->
<!-- BE CAREFUL: this group (OCE_budget) cannot be called in file_def.xml as such (unless nn_fsbc=1)
If doing so, the last output (in time) of the netcdf file
would be corrupted (NaN values). However calling each of these
variables directly in the file_def.xml works. It is probably
because there is a mix up of sbc variables with other variables
-->
<field_group id="OCE_budget" grid_ref="grid_T_2D" >
<field field_ref="sst" name="tos" />
<field field_ref="sss" name="sos" />
<field field_ref="ssh" name="zos" />
<!-- mass flux -->
<field field_ref="empmr" name="empmr" />
<field field_ref="runoffs" name="runoffs" />
<field field_ref="emp_ice" name="emp_ice" />
<field field_ref="emp_oce" name="emp_oce" />
<field field_ref="iceshelf_cea" name="iceshelf" />
<field field_ref="iceberg_cea" name="iceberg" />
<field field_ref="calving_cea" name="calving" />
<!-- <field field_ref="berg_floating_melt" name="calving" /> -->
<field field_ref="precip" name="precip" />
<field field_ref="snowpre" name="snowpre" />
<field field_ref="rain" name="rain" />
<field field_ref="evap_ao_cea" name="evap_ao" />
<field field_ref="subl_ai_cea" name="subl_ai" />
<field field_ref="snow_ai_cea" name="snow_ai" />
<field field_ref="snow_ao_cea" name="snow_ao" />
<!-- heat flux -->
<field field_ref="qsr" name="qsr" />
<field field_ref="qns" name="qns" />
<field field_ref="qt_oce" name="qt_oce" />
<field field_ref="qemp_oce" name="qemp_oce" />
<field field_ref="hflx_rain_cea" name="hflx_rain" />
<field field_ref="hflx_evap_cea" name="hflx_evap" />
<field field_ref="hflx_snow_cea" name="hflx_snow" />
<field field_ref="hflx_snow_ao_cea" name="hflx_snow_ao" />
<field field_ref="hflx_snow_ai_cea" name="hflx_snow_ai" />
<field field_ref="hflx_rnf_cea" name="hflx_rnf" />
<field field_ref="hflx_icb_cea" name="hflx_icb" />
<field field_ref="hflx_isf_cea" name="hflx_isf" />
<!-- salt flux (includes ssr) -->
<field field_ref="saltflx" name="saltflx" />
<field field_ref="sflx_rnf_cea" name="sflx_rnf" />
<!-- relaxation and damping -->
<field field_ref="hflx_ssr_cea" name="hflx_ssr" />
<field field_ref="vflx_ssr_cea" name="vflx_ssr" />
<field field_ref="sflx_ssr_cea" name="sflx_ssr" />
<field field_ref="hflx_dmp_cea" name="hflx_dmp" />
<field field_ref="sflx_dmp_cea" name="sflx_dmp" />
<field field_ref="hflx_fwb_cea" name="hflx_fwb" />
<field field_ref="vflx_fwb_cea" name="vflx_fwb" />
</field_group>
<field_group id="OCE_globalbudget" grid_ref="grid_scalar" >
<field field_ref="voltot" name="scvoltot" />
<field field_ref="saltot" name="scsaltot" />
<field field_ref="temptot" name="sctemtot" />
</field_group>
</field_group> <!-- close all_ocean group -->
</field_definition>
cfgs/X3_ORCA2_ICE_PISCES/EXPREF/field_def_nemo-pisces.xml 0 → 100644
View file @ dd59ced6
<?xml version="1.0"?>
<!--
============================================================================================================
= definition of all existing variables =
= DO NOT CHANGE =
============================================================================================================
-->
<field_definition level="1" prec="4" operation="average" enabled=".TRUE." default_value="1.e20" > <!-- time step automaticaly defined -->
<field_group id="all_pisces" chunking_blocksize_target="3.0">
<!--
============================================================================================================
Biogeochemistry model variables
============================================================================================================
-->
<!-- ptrc on T grid -->
<field_group id="ptrc_T" grid_ref="grid_T_3D">
<!-- PISCES standard : variables available with ln_p4z -->
<field id="DIC" long_name="Dissolved inorganic Concentration" unit="mmol/m3" />
<field id="DIC_e3t" long_name="DIC * e3t" unit="mmol/m2" > DIC * e3t </field >
<field id="Alkalini" long_name="Total Alkalinity Concentration" unit="mmol/m3" />
<field id="Alkalini_e3t" long_name="Alkalini * e3t" unit="mmol/m2" > Alkalini * e3t </field >
<field id="O2" long_name="Oxygen Concentration" unit="mmol/m3" />
<field id="O2_e3t" long_name="O2 * e3t" unit="mmol/m2" > O2 * e3t </field >
<field id="CaCO3" long_name="Calcite Concentration" unit="mmol/m3" />
<field id="CaCO3_e3t" long_name="CaCO3 * e3t" unit="mmol/m2" > CaCO3 * e3t </field >
<field id="PO4" long_name="Phosphate Concentration" unit="mmol/m3" />
<field id="PO4_e3t" long_name="PO4 * e3t" unit="mmol/m2" > PO4 * e3t </field >
<field id="POC" long_name="Small organic carbon Concentration" unit="mmol/m3" />
<field id="POC_e3t" long_name="POC * e3t" unit="mmol/m2" > POC * e3t </field >
<field id="Si" long_name="Silicate Concentration" unit="mmol/m3" />
<field id="Si_e3t" long_name="Si * e3t" unit="mmol/m2" > Si * e3t </field >
<field id="PHY" long_name="(Nano)Phytoplankton Concentration" unit="mmol/m3" />
<field id="PHY_e3t" long_name="PHY * e3t" unit="mmol/m2" > PHY * e3t </field >
<field id="ZOO" long_name="(Micro)Zooplankton Concentration" unit="mmol/m3" />
<field id="ZOO_e3t" long_name="ZOO2 * e3t" unit="mmol/m2" > ZOO * e3t </field >
<field id="DOC" long_name="Dissolved organic Concentration" unit="mmol/m3" />
<field id="DOC_e3t" long_name="DOC * e3t" unit="mmol/m2" > DOC * e3t </field >
<field id="PHY2" long_name="Diatoms Concentration" unit="mmol/m3" />
<field id="PHY2_e3t" long_name="PHY2 * e3t" unit="mmol/m2" > PHY2 * e3t </field >
<field id="ZOO2" long_name="Mesozooplankton Concentration" unit="mmol/m3" />
<field id="ZOO2_e3t" long_name="ZOO2 * e3t" unit="mmol/m2" > ZOO2 * e3t </field >
<field id="DSi" long_name="Diatoms Silicate Concentration" unit="mmol/m3" />
<field id="DSi_e3t" long_name="Dsi * e3t" unit="mmol/m2" > DSi * e3t </field >
<field id="Fer" long_name="Dissolved Iron Concentration" unit="mmol/m3" />
<field id="Fer_e3t" long_name="Fer * e3t" unit="mmol/m2" > Fer * e3t </field >
<field id="BFe" long_name="Big iron particles Concentration" unit="mmol/m3" />
<field id="BFe_e3t" long_name="BFe * e3t" unit="mmol/m2" > BFe * e3t </field >
<field id="GOC" long_name="Big organic carbon Concentration" unit="mmol/m3" />
<field id="GOC_e3t" long_name="GOC * e3t" unit="mmol/m2" > GOC * e3t </field >
<field id="SFe" long_name="Small iron particles Concentration" unit="mmol/m3" />
<field id="SFe_e3t" long_name="SFe * e3t" unit="mmol/m2" > SFe * e3t </field >
<field id="DFe" long_name="Diatoms iron Concentration" unit="mmol/m3" />
<field id="DFe_e3t" long_name="DFe * e3t" unit="mmol/m2" > DFe * e3t </field >
<field id="GSi" long_name="Sinking biogenic Silicate Concentration" unit="mmol/m3" />
<field id="GSi_e3t" long_name="GSi * e3t" unit="mmol/m2" > GSi * e3t </field >
<field id="NFe" long_name="Nano iron Concentration" unit="mmol/m3" />
<field id="NFe_e3t" long_name="NFe * e3t" unit="mmol/m2" > NFe * e3t </field >
<field id="NCHL" long_name="Nano chlorophyl Concentration" unit="gChl/m3" />
<field id="NCHL_e3t" long_name="NCHL * e3t" unit="mmol/m2" > NCHL * e3t </field >
<field id="DCHL" long_name="Diatoms chlorophyl Concentration" unit="gChl/m3" />
<field id="DCHL_e3t" long_name="DCHL * e3t" unit="mmol/m2" > DCHL * e3t </field >
<field id="NO3" long_name="Nitrate Concentration" unit="mmol/m3" />
<field id="NO3_e3t" long_name="NO3 * e3t" unit="mmol/m2" > NO3 * e3t </field >
<field id="NH4" long_name="Ammonium Concentration" unit="mmol/m3" />
<field id="NH4_e3t" long_name="NH4 * e3t" unit="mmol/m2" > NH4 * e3t </field >
<!-- PISCES quota : variables available with ln_p5z -->
<field id="DON" long_name="Dissolved organic N Concentration" unit="mmol/m3" />
<field id="DON_e3t" long_name="DON * e3t" unit="mmol/m2" > DON * e3t </field >
<field id="DOP" long_name="Dissolved organic P Concentration" unit="mmol/m3" />
<field id="DOP_e3t" long_name="DOP * e3t" unit="mmol/m2" > DOP * e3t </field >
<field id="PON" long_name="Small PON Concentration" unit="mmol/m3" />
<field id="PON_e3t" long_name="PON * e3t" unit="mmol/m2" > PON * e3t </field >
<field id="POP" long_name="Small POP Concentration" unit="mmol/m3" />
<field id="POP_e3t" long_name="POP * e3t" unit="mmol/m2" > POP * e3t </field >
<field id="GON" long_name="Big PON Concentration" unit="mmol/m3" />
<field id="GON_e3t" long_name="GON * e3t" unit="mmol/m2" > GON * e3t </field >
<field id="GOP" long_name="Big POP Concentration" unit="mmol/m3" />
<field id="GOP_e3t" long_name="GOP * e3t" unit="mmol/m2" > GOP * e3t </field >
<field id="PHYN" long_name="Nanophytoplankton N biomass" unit="mmol/m3" />
<field id="PHYN_e3t" long_name="PHYN * e3t" unit="mmol/m2" > PHYN * e3t </field >
<field id="PHYP" long_name="Nanophytoplankton P biomass" unit="mmol/m3" />
<field id="PHYP_e3t" long_name="PHYP * e3t" unit="mmol/m2" > PHYP * e3t </field >
<field id="DIAN" long_name="Diatoms N biomass" unit="mmol/m3" />
<field id="DIAN_e3t" long_name="DIAN * e3t" unit="mmol/m2" > DIAN * e3t </field >
<field id="DIAP" long_name="Diatoms P biomass" unit="mmol/m3" />
<field id="DIAP_e3t" long_name="DIAP * e3t" unit="mmol/m2" > DIAP * e3t </field >
<field id="PIC" long_name="Picophytoplankton C biomass" unit="mmol/m3" />
<field id="PIC_e3t" long_name="PIC * e3t" unit="mmol/m2" > PIC * e3t </field >
<field id="PICN" long_name="Picophytoplankton N biomass" unit="mmol/m3" />
<field id="PICN_e3t" long_name="PICN * e3t" unit="mmol/m2" > PICN * e3t </field >
<field id="PICP" long_name="Picophytoplankton P biomass" unit="mmol/m3" />
<field id="PICP_e3t" long_name="PICP * e3t" unit="mmol/m2" > PICP * e3t </field >
<field id="PFe" long_name="Picophytoplankton Fe biomass" unit="mmol/m3" />
<field id="PFe_e3t" long_name="PFe * e3t" unit="mmol/m2" > PFe * e3t </field >
<field id="PCHL" long_name="Picophytoplankton Chl biomass" unit="gChl/m3" />
<field id="PCHL_e3t" long_name="PCHL * e3t" unit="mmol/m2" > PCHL * e3t </field >
<!-- PISCES with ligand parametisation : variables available namelist paramter ln_ligand -->
<field id="LGW" long_name="Weak ligands concentration" unit="mmol/m3" />
<field id="LGW_e3t" long_name="LGW * e3t" unit="mmol/m2" > LGW * e3t </field >
</field_group>
<!-- SEDIMENT variables on T sediment grid -->
<field_group id="sed_T" grid_ref="grid_T_3DS">
<field id="SedDIC" long_name="Dissolved inorganic Concentration" unit="mmol/m3" />
<field id="SedAlkalini" long_name="Total Alkalinity Concentration" unit="mmol/m3" />
<field id="SedO2" long_name="Oxygen Concentration" unit="mmol/m3" />
<field id="SedCaCO3" long_name="Calcite Concentration" unit="g/cm3" />
<field id="SedPOC1" long_name="POC1 Concentration" unit="g/cm3" />
<field id="SedPO4" long_name="Phosphate Concentration" unit="mmol/m3" />
<field id="SedPOC2" long_name="POC2 Concentration" unit="g/cm3" />
<field id="SedPOC3" long_name="POC3 Concentration" unit="g/cm3" />
<field id="SedPOC4" long_name="POC4 Concentration" unit="g/cm3" />
<field id="SedPOC5" long_name="POC5 Concentration" unit="g/cm3" />
<field id="SedPOC6" long_name="POC6 Concentration" unit="g/cm3" />
<field id="SedSil" long_name="Silicate Concentration" unit="mmol/m3" />
<field id="SedFe2" long_name="Fe2+ Concentration" unit="mmol/m3" />
<field id="SedBSi" long_name="Biogenic Silicate Concentration" unit="g/cm3" />
<field id="SedNO3" long_name="Nitrate Concentration" unit="mmol/m3" />
<field id="SedNH4" long_name="Ammonium Concentration" unit="mmol/m3" />
<field id="SedH2S" long_name="H2S Concentration" unit="mmol/m3" />
<field id="SedSO4" long_name="SO4 Concentration" unit="mmol/m3" />
<field id="SedClay" long_name="Clay Concentration" unit="g/cm3" />
<field id="SedFeO" long_name="Fe(OH)3 Concentration" unit="g/cm3" />
<field id="SedFeS" long_name="FeS Concentration" unit="g/cm3" />
<field id="Sedligand" long_name="Ligands" unit="mol/m3" />
</field_group>
<!-- SEDIMENT additional variables on T sediment grid -->
<field_group id="Diag_S" grid_ref="grid_T_2D">
<field id="SaturCO3" long_name="CO3 Saturation" unit="-" grid_ref="grid_T_3DS" />
<field id="SedpH" long_name="PH" unit="1" grid_ref="grid_T_3DS" />
<field id="SedCO3por" long_name="Bicarbonates" unit="mol/m3" grid_ref="grid_T_3DS" />
<field id="FlxSi" long_name="Si sediment flux" unit="mol/cm2/s" />
<field id="FlxO2" long_name="O2 sediment flux" unit="mol/cm2/s" />
<field id="FlxDIC" long_name="DIC sediment flux" unit="mol/cm2/s" />
<field id="FlxNO3" long_name="NO3 sediment flux" unit="mol/cm2/s" />
<field id="FlxPO4" long_name="PO4 sediment flux" unit="mol/cm2/s" />
<field id="FlxAlkalini" long_name="Alkalinity sediment flux" unit="mol/cm2/s" />
<field id="FlxNH4" long_name="Ammonium sediment flux" unit="mol/cm2/s" />
<field id="FlxH2S" long_name="H2S sediment flux" unit="mol/cm2/s" />
<field id="FlxSO4" long_name="SO4 sediment flux" unit="mol/cm2/s" />
<field id="FlxFe2" long_name="Fe2+ sediment flux" unit="mol/cm2/s" />
<field id="FlxLig" long_name="Ligand sediment flux" unit="mol/cm2/s" />
<field id="dzdep" long_name="Sedimentation rate" unit="cm/s" />
<field id="FlxClay" long_name="Clay burial rate" unit="g/cm2/s" />
<field id="FlxCaCO3" long_name="Calcite burial rate" unit="g/cm2/s" />
<field id="FlxBSi" long_name="BSi burial rate" unit="g/cm2/s" />
<field id="FlxPOC1" long_name="POC1 burial rate" unit="g/cm2/s" />
<field id="FlxFeO" long_name="Fe(OH)3 burial rate" unit="g/cm2/s" />
<field id="FlxFeS" long_name="FeS burial rate" unit="g/cm2/s" />
<field id="FlxPOC2" long_name="POC2 burial rate" unit="g/cm2/s" />
<field id="FlxPOC3" long_name="POC3 burial rate" unit="g/cm2/s" />
<field id="FlxPOC4" long_name="POC4 burial rate" unit="g/cm2/s" />
<field id="FlxPOC5" long_name="POC5 burial rate" unit="g/cm2/s" />
<field id="FlxPOC6" long_name="POC6 burial rate" unit="g/cm2/s" />
<field id="Flxtot" long_name="total burial flux" unit="g/cm2/s" />
<field id="Rstepros" long_name="Number of iterations" unit="-" />
<field id="sflxclay" long_name="Clay sedimentation rate" unit="g/cm2/s" />
<field id="sflxbsi" long_name="BSi sedimentation rate" unit="g/cm2/s" />
<field id="sflxpoc" long_name="POC sedimentation rate" unit="g/cm2/s" />
<field id="sflxcal" long_name="Calcite sedimentation rate" unit="mol/cm2/s" />
<field id="OceDIC" long_name="DIC at ocean bottom " unit="mmol/m3" />
<field id="OceALK" long_name="ALK at ocean bottom " unit="mmol/m3" />
<field id="OceOXY" long_name="OXY at ocean bottom " unit="mmol/m3" />
<field id="OceSIL" long_name="SIL at ocean bottom " unit="mmol/m3" />
<field id="OceNO3" long_name="NO3 at ocean bottom " unit="mmol/m3" />
<field id="OcePO4" long_name="PO4 at ocean bottom " unit="mmol/m3" />
<field id="OceNH4" long_name="NH4 at ocean bottom " unit="mmol/m3" />
<field id="OceSO4" long_name="SO4 at ocean bottom " unit="mmol/m3" />
<field id="OceFE2" long_name="Dissolved Iron at ocean bottom " unit="mmol/m3" />
<field id="OceTEM" long_name="Temperature at ocean bottom " unit="degC" />
<field id="OceSAL" long_name="Salinity at oceaan bottom " unit="1e-3" />
<field id="OceSFE" long_name="Sinking Iron at ocean bottom " unit="-" />
</field_group>
<!-- PISCES additional diagnostics on T grid -->
<field_group id="diad_T" grid_ref="grid_T_2D_inner" >
<field id="PH" long_name="PH" unit="1" grid_ref="grid_T_3D_inner" />
<field id="CO3" long_name="Bicarbonates" unit="mol/m3" grid_ref="grid_T_3D_inner" />
<field id="CO3sat" long_name="CO3 saturation" unit="mol/m3" grid_ref="grid_T_3D_inner" />
<field id="DCAL" long_name="Calcite dissolution" unit="mol/m3/s" grid_ref="grid_T_3D_inner" />
<field id="PAR" long_name="Photosynthetically Available Radiation" unit="W/m2" grid_ref="grid_T_3D_inner" />
<field id="PPPHYN" long_name="Primary production of nanophyto" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="PPPHYP" long_name="Primary production of picophyto" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="PPPHYD" long_name="Primary production of diatoms" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="PPNEWN" long_name="New Primary production of nanophyto" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="PPNEWP" long_name="New Primary production of picophyto" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="PPNEWD" long_name="New Primary production of diatoms" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="GPPHYN" long_name="Gross Primary production of nanophyto" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="GPPHYP" long_name="Gross Primary production of picophyto" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="GPPHYD" long_name="Gross Primary production of diatoms" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="PBSi" long_name="Primary production of Si diatoms" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="PFeN" long_name="Primary production of nano iron" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="PFeP" long_name="Primary production of pico iron" unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="PFeD" long_name="Primary production of diatoms iron" unit="mol/m3/s" grid_ref="grid_T_3D_inner" />
<field id="xfracal" long_name="Calcifying fraction" unit="1" grid_ref="grid_T_3D_inner" />
<field id="PCAL" long_name="Calcite production" unit="mol/m3/s" grid_ref="grid_T_3D_inner" />
<field id="GRAZ1" long_name="Grazing by microzooplankton" unit="mol/m3/s" grid_ref="grid_T_3D_inner" />
<field id="GRAZ2" long_name="Grazing by mesozooplankton" unit="mol/m3/s" grid_ref="grid_T_3D_inner" />
<field id="REMIN" long_name="Oxic remineralization of OM" unit="mol/m3/s" grid_ref="grid_T_3D_inner" />
<field id="DENIT" long_name="Anoxic remineralization of OM" unit="mol/m3/s" grid_ref="grid_T_3D_inner" />
<field id="REMINP" long_name="Oxic remineralization rate of POC" unit="d-1" grid_ref="grid_T_3D_inner" />
<field id="REMING" long_name="Oxic remineralization rate of GOC" unit="d-1" grid_ref="grid_T_3D_inner" />
<field id="Nfix" long_name="Nitrogen fixation" unit="mol/m3/s" grid_ref="grid_T_3D_inner" />
<field id="Mumax" long_name="Maximum growth rate" unit="s-1" grid_ref="grid_T_3D_inner" />
<field id="MuN" long_name="Realized growth rate for nanophyto" unit="s-1" grid_ref="grid_T_3D_inner" />
<field id="MuP" long_name="Realized growth rate for picophyto" unit="s-1" grid_ref="grid_T_3D_inner" />
<field id="MuD" long_name="Realized growth rate for diatomes" unit="s-1" grid_ref="grid_T_3D_inner" />
<field id="MunetN" long_name="Net growth rate for nanophyto" unit="s-1" grid_ref="grid_T_3D_inner" />
<field id="MunetP" long_name="Net growth rate for picophyto" unit="s-1" grid_ref="grid_T_3D_inner" />
<field id="MunetD" long_name="Net growth rate for diatomes" unit="s-1" grid_ref="grid_T_3D_inner" />
<field id="LNnut" long_name="Nutrient limitation term in Nanophyto" unit="" grid_ref="grid_T_3D_inner" />
<field id="LPnut" long_name="Nutrient limitation term in Picophyto" unit="-" grid_ref="grid_T_3D_inner" />
<field id="LDnut" long_name="Nutrient limitation term in Diatoms" unit="" grid_ref="grid_T_3D_inner" />
<field id="LNFe" long_name="Iron limitation term in Nanophyto" unit="" grid_ref="grid_T_3D_inner" />
<field id="LPFe" long_name="Iron limitation term in Picophyto" unit="-" grid_ref="grid_T_3D_inner" />
<field id="LDFe" long_name="Iron limitation term in Diatoms" unit="" grid_ref="grid_T_3D_inner" />
<field id="LNlight" long_name="Light limitation term in Nanophyto" unit="" grid_ref="grid_T_3D_inner" />
<field id="LPlight" long_name="Light limitation term in Picophyto" unit="-" grid_ref="grid_T_3D_inner" />
<field id="LDlight" long_name="Light limitation term in Diatoms" unit="" grid_ref="grid_T_3D_inner" />
<field id="SIZEN" long_name="Mean relative size of nanophyto." unit="-" grid_ref="grid_T_3D_inner" />
<field id="SIZEP" long_name="Mean relative size of picophyto." unit="-" grid_ref="grid_T_3D_inner" />
<field id="SIZED" long_name="Mean relative size of diatoms" unit="-" grid_ref="grid_T_3D_inner" />
<field id="THETANANO" long_name="Diagnostic Chl:C ratio" unit="mgChl/mgC" grid_ref="grid_T_3D_inner" />
<field id="CHL" long_name="Total Chl" unit="gChl/m3" grid_ref="grid_T_3D_inner"/>
<field id="RASSD" long_name="Size of the protein machinery (Diat.)" unit="-" grid_ref="grid_T_3D_inner" />
<field id="RASSN" long_name="Size of the protein machinery (Nano.)" unit="-" grid_ref="grid_T_3D_inner" />
<field id="RASSP" long_name="Size of the protein machinery (Pico.)" unit="-" grid_ref="grid_T_3D_inner" />
<field id="Fe3" long_name="Iron III concentration" unit="nmol/m3" grid_ref="grid_T_3D_inner" />
<field id="FeL1" long_name="Complexed Iron concentration with L1" unit="nmol/m3" grid_ref="grid_T_3D_inner" />
<field id="TL1" long_name="Total L1 concentration" unit="nmol/m3" grid_ref="grid_T_3D_inner" />
<field id="pdust" long_name="dust concentration" unit="kg/m3" />
<field id="Totlig" long_name="Total ligand concentation" unit="nmol/m3" grid_ref="grid_T_3D_inner" />
<field id="Biron" long_name="Bioavailable iron" unit="nmol/m3" grid_ref="grid_T_3D_inner" />
<field id="Sdenit" long_name="Nitrate reduction in the sediments" unit="mol/m2/s" />
<field id="Ironice" long_name="Iron input/uptake due to sea ice" unit="mol/m2/s" />
<field id="SedCal" long_name="Calcite burial in the sediments" unit="molC/m2/s" />
<field id="SedSi" long_name="Silicon burial in the sediments" unit="molSi/m2/s" />
<field id="SedC" long_name="Organic C burial in the sediments" unit="molC/m2/s" />
<field id="HYDR" long_name="Iron input from hydrothemal vents" unit="mol/m2/s" grid_ref="grid_T_3D_inner" />
<field id="EPC100" long_name="Export of carbon particles at 100 m" unit="mol/m2/s" />
<field id="EPFE100" long_name="Export of biogenic iron at 100 m" unit="mol/m2/s" />
<field id="EPSI100" long_name="Export of Silicate at 100 m" unit="mol/m2/s" />
<field id="EPCAL100" long_name="Export of Calcite at 100 m" unit="mol/m2/s" />
<field id="EXPC" long_name="Export of carbon" unit="mol/m2/s" grid_ref="grid_T_3D_inner" />
<field id="EXPFE" long_name="Export of biogenic iron" unit="mol/m2/s" grid_ref="grid_T_3D_inner" />
<field id="EXPSI" long_name="Export of Silicate" unit="mol/m2/s" grid_ref="grid_T_3D_inner" />
<field id="EXPCAL" long_name="Export of Calcite" unit="mol/m2/s" grid_ref="grid_T_3D_inner" />
<field id="Cflx" long_name="DIC flux" unit="mol/m2/s" />
<field id="Oflx" long_name="Oxygen flux" unit="mol/m2/s" />
<field id="Kg" long_name="Gas transfer" unit="mol/m2/s/uatm" />
<field id="Dpco2" long_name="Delta CO2" unit="uatm" />
<field id="pCO2sea" long_name="surface ocean pCO2" unit="uatm" />
<field id="Dpo2" long_name="Delta O2" unit="uatm" />
<field id="Heup" long_name="Euphotic layer depth" unit="m" grid_ref="grid_T_2D_inner" />
<field id="AtmCo2" long_name="Atmospheric CO2 concentration" unit="ppm" />
<field id="Irondep" long_name="Iron deposition from dust" unit="mol/m2/s" />
<field id="Ironsed" long_name="Iron deposition from sediment" unit="mol/m2/s" grid_ref="grid_T_3D_inner" />
<field id="FESCAV" long_name="Scavenging of Iron" unit="mmol-Fe/m3/s" grid_ref="grid_T_3D_inner" />
<field id="FECOLL" long_name="Colloidal Pumping of FeL" unit="mmol-FeL/m3/s" grid_ref="grid_T_3D_inner" />
<field id="LGWCOLL" long_name="Coagulation loss of ligands" unit="mmol-L/m3/s" grid_ref="grid_T_3D_inner" />
<field id="REMINF" long_name="Oxic remineralization suppy of Fe" unit="mmol-Fe/m3/s" grid_ref="grid_T_3D_inner" />
<field id="BACT" long_name="Bacterial Biomass" unit="mmol/m3" grid_ref="grid_T_3D_inner" />
<field id="FEBACT" long_name="Bacterial uptake of Fe" unit="molFe/m3/s" grid_ref="grid_T_3D_inner" />
<field id="FEPREC" long_name="Precipitation of Fe" unit="molFe/m3/s" grid_ref="grid_T_3D_inner" />
<field id="LPRODR" long_name="OM remineralisation ligand production rate" unit="nmol-L/m3/s" grid_ref="grid_T_3D_inner" />
<field id="LPRODP" long_name="phytoplankton ligand production rate" unit="nmol-L/m3/s" grid_ref="grid_T_3D_inner" />
<field id="LIGREM" long_name="Remineralisation loss of ligands" unit="nmol-L/m3/s" grid_ref="grid_T_3D_inner" />
<field id="LIGPR" long_name="Photochemical loss of ligands" unit="nmol-L/m3/s" grid_ref="grid_T_3D_inner" />
<field id="LDETP" long_name="Ligand destruction during phytoplankton uptake" unit="nmol-L/m3/s" grid_ref="grid_T_3D_inner" />
<field id="LPRODZ2" long_name="mesozooplankton ligand production rate" unit="nmol-L/m3/s" grid_ref="grid_T_3D_inner" />
<field id="LPRODZ" long_name="microzooplankton ligand production rate" unit="nmol-L/m3/s" grid_ref="grid_T_3D_inner" />
<field id="FEZOO" long_name="microzooplankton iron recycling rate" unit="nmol-FeL/m3/s" grid_ref="grid_T_3D_inner" />
<field id="FEZOO2" long_name="mesozooplankton iron recycling rate" unit="nmol-FeL/m3/s" grid_ref="grid_T_3D_inner" />
<field id="MicroZo2" long_name="O2 consumption by microzooplankton" unit="molC/m2/s" grid_ref="grid_T_3D_inner" />
<field id="Remino2" long_name="O2 consumption by remineralisation" unit="molC/m2/s" grid_ref="grid_T_3D_inner" />
<field id="Nfixo2" long_name="O2 production by Nfix" unit="molN/m2/s" grid_ref="grid_T_3D_inner" />
<field id="PPNEWo2" long_name="Oxygen production by the New Produc." unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="PPRego2" long_name="Oxygen production by the Regen Produc." unit="molC/m3/s" grid_ref="grid_T_3D_inner" />
<field id="MesoZo2" long_name="O2 consumption by mesozooplankton" unit="molC/m2/s" grid_ref="grid_T_3D_inner" />
<field id="Nitrifo2" long_name="O2 consumption by nitrification" unit="molC/m2/s" grid_ref="grid_T_3D_inner" />
<field id="No3dep" long_name="Nitrate deposition at surface" unit="molN/m2/s" />
<field id="Sildep" long_name="silicate deposition at surface" unit="molC/m2/s" />
<field id="Po4dep" long_name="Phosphorus deposition at surface" unit="molP/m2/s" />
<field id="Nh4dep" long_name="Ammonium deposition at surface" unit="molN/m2/s" />
<!-- PISCES tracers trends -->
<field id="INTdtAlk" long_name="Vertically int. of change of alkalinity" unit="mol/m2/s" />
<field id="INTdtDIC" long_name="Vertically int. of change of dissic " unit="mol/m2/s" />
<field id="INTdtFer" long_name="Vertically int. of change of iron " unit="mol/m2/s" />
<field id="INTdtDIN" long_name="Vertically int. of change of nitrogen " unit="mol/m2/s" />
<field id="INTdtDIP" long_name="Vertically int. of change of phophate " unit="mol/m2/s" />
<field id="INTdtSil" long_name="Vertically int. of change of silicon " unit="mol/m2/s" />
<field id="TPP" long_name="Total Primary production of phyto" unit="mol/m3/s" grid_ref="grid_T_3D_inner" />
<field id="TPNEW" long_name="New Primary production of phyto" unit="mol/m3/s" grid_ref="grid_T_3D_inner" />
<field id="TPBFE" long_name="Total biogenic iron production" unit="mol/m3/s" grid_ref="grid_T_3D_inner" />
<field id="INTDIC" long_name="DIC content" unit="kg/m2" />
<field id="O2MIN" long_name="Oxygen minimum concentration" unit="mol/m3" />
<field id="ZO2MIN" long_name="Depth of oxygen minimum concentration" unit="m" />
<field id="Nfix_e3t" long_name="Nfix * e3t" unit="molN/m2/s" grid_ref="grid_T_3D_inner" > Nfix * e3t </field >
<field id="PPPHYN_e3t" long_name="PPPHYN * e3t" unit="mol/m2/s" grid_ref="grid_T_3D_inner" > PPPHYN * e3t </field >
<field id="PPPHYD_e3t" long_name="PPPHYD * e3t" unit="mol/m2/s" grid_ref="grid_T_3D_inner" > PPPHYD * e3t </field >
<field id="PPPHYP_e3t" long_name="PPPHYP * e3t" unit="mol/m2/s" grid_ref="grid_T_3D_inner" > PPPHYP * e3t </field >
<field id="PBSi_e3t" long_name="PBSi * e3t" unit="mol/m2/s" grid_ref="grid_T_3D_inner" > PBSi * e3t </field >
<field id="TPP_e3t" long_name="TPP * e3t" unit="mol/m2/s" grid_ref="grid_T_3D_inner" > TPP * e3t </field >
<field id="TPNEW_e3t" long_name="TPNEW * e3t" unit="mol/m2/s" grid_ref="grid_T_3D_inner" > TPNEW * e3t </field >
<field id="TPBFE_e3t" long_name="TPBFE * e3t" unit="mol/m2/s" grid_ref="grid_T_3D_inner" > TPBFE * e3t </field >
<field id="INTNFIX" long_name="Nitrogen fixation rate : vert. integrated" field_ref="Nfix_e3t" unit="mol/m2/s" grid_ref="grid_T_vsum" detect_missing_value="true" />
<field id="INTPPPHYN" long_name="Vertically integrated primary production by nanophy" field_ref="PPPHYN_e3t" unit="mol/m2/s" grid_ref="grid_T_vsum" detect_missing_value="true" />
<field id="INTPPPHYD" long_name="Vertically integrated primary production by diatom" field_ref="PPPHYD_e3t" unit="mol/m2/s" grid_ref="grid_T_vsum" detect_missing_value="true" />
<field id="INTPPPHYP" long_name="Vertically integrated primary production by picophy" field_ref="PPPHYP_e3t" unit="mol/m2/s" grid_ref="grid_T_vsum" detect_missing_value="true" />
<field id="INTPP" long_name="Vertically integrated primary production by phyto" field_ref="TPP_e3t" unit="mol/m2/s" grid_ref="grid_T_vsum" detect_missing_value="true" />
<field id="INTPNEW" long_name="Vertically integrated new primary production" field_ref="TPNEW_e3t" unit="mol/m2/s" grid_ref="grid_T_vsum" detect_missing_value="true" />
<field id="INTPBFE" long_name="Vertically integrated of biogenic iron production" field_ref="TPBFE_e3t" unit="mol/m2/s" grid_ref="grid_T_vsum" detect_missing_value="true" />
<field id="INTPBSI" long_name="Vertically integrated of biogenic Si production" field_ref="PBSi_e3t" unit="mol/m2/s" grid_ref="grid_T_vsum" detect_missing_value="true" />
</field_group>
<field_group id="tracer_scalar" grid_ref="grid_scalar" >
<!-- PISCES scalar -->
<field id="pno3tot" long_name="Global mean nitrate concentration" unit="mol/m3" />
<field id="ppo4tot" long_name="global mean phosphorus concentration" unit="mol/m3" />
<field id="psiltot" long_name="Global mean silicate concentration" unit="mol/m3" />
<field id="palktot" long_name="Global mean alkalinity concentration" unit="mol/m3" />
<field id="pfertot" long_name="Global mean iron concentration" unit="mol/m3" />
<field id="tcflx" long_name="Total Flux of Carbon out of the ocean" unit="mol/s" />
<field id="tcflxcum" long_name="Cumulative total Flux of Carbon out of the ocean" unit="mol/s" />
<field id="tcexp" long_name="Total Carbon export at 100m" unit="mol/s" />
<field id="tintpp" long_name="Global total integrated primary production" unit="mol/s" />
<field id="tnfix" long_name="Global total nitrogen fixation" unit="mol/s" />
<field id="tdenit" long_name="Total denitrification" unit="mol/s" />
</field_group>
</field_group> <!-- close all_pisces group -->
</field_definition>