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  • nemo/nemo
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cfgs/C1D/EXP_PISCES_BATS/field_def_nemo-pisces.xml 0 → 120000
View file @ 572d155d
../../SHARED/field_def_nemo-pisces.xml
\ No newline at end of file
cfgs/C1D/EXP_PISCES_BATS/file_def_nemo.xml 0 → 100644
View file @ 572d155d
<?xml version="1.0"?>
<!--
============================================================================================================
= output files definition =
= Define your own filesfor ocean dynamics context =
= put the variables you want... =
============================================================================================================
-->
<file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="1mo" min_digits="4">
<file_group id="oce_1d" output_freq="1d" output_level="10" enabled=".TRUE."> <!-- 5d files -->
</file_group>
<file_group id="oce_1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files -->
<file id="file1" name_suffix="_nemo" description="pisces sms variables" >
<field field_ref="toce" />
<field field_ref="soce" />
<field field_ref="sst" />
<field field_ref="sss" />
<field field_ref="empmr" />
<field field_ref="wspd" />
<field field_ref="mldr10_1" name="mld" />
<field field_ref="qsr" name="qsr" />
<field field_ref="DIC" />
<field field_ref="Alkalini" />
<field field_ref="O2" />
<field field_ref="CaCO3" />
<field field_ref="PO4" />
<field field_ref="POC" />
<field field_ref="Si" />
<field field_ref="PHY" />
<field field_ref="ZOO" />
<field field_ref="DOC" />
<field field_ref="PHY2" />
<field field_ref="ZOO2" />
<field field_ref="DSi" />
<field field_ref="Fer" />
<field field_ref="BFe" />
<field field_ref="GOC" />
<field field_ref="SFe" />
<field field_ref="DFe" />
<field field_ref="GSi" />
<field field_ref="NFe" />
<field field_ref="NCHL" />
<field field_ref="DCHL" />
<field field_ref="NO3" />
<field field_ref="NH4" />
<field field_ref="INTPP" name="INTPP" />
<field field_ref="PAR" />
<field field_ref="PPPHYN" />
<field field_ref="PPPHYD" />
<field field_ref="PPNEWN" />
<field field_ref="PPNEWD" />
<field field_ref="PBSi" />
<field field_ref="PFeN" />
<field field_ref="PFeD" />
<field field_ref="GRAZ1" />
<field field_ref="GRAZ2" />
<field field_ref="EPC100" />
<field field_ref="EPFE100" />
<field field_ref="EPSI100" />
<field field_ref="EPCAL100" />
<field field_ref="Cflx" />
<field field_ref="Heup" />
</file>
</file_group>
<file_group id="oce_1y" output_freq="1y" output_level="10" enabled=".FALSE."> <!-- real yearly files -->
</file_group>
<file_group id="oce_1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="oce_2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="oce_3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="oce_4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="oce_6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="oce_2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
<file_group id="oce_3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
<file_group id="oce_4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
<file_group id="oce_6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
<file_group id="oce_2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="oce_5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="oce_10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
</file_definition>
cfgs/C1D/EXP_PISCES_BATS/grid_def_nemo.xml 0 → 120000
View file @ 572d155d
../../SHARED/grid_def_nemo.xml
\ No newline at end of file
cfgs/ORCA2_ICE_ABL/EXPREF/namelist_cfg → cfgs/C1D/EXP_PISCES_BATS/namelist_cfg
View file @ 572d155d
......@@ -10,36 +10,40 @@
!! namcfg parameters of the configuration (default: user defined GYRE)
!! namwad Wetting and drying (default: OFF)
!! namtsd data: temperature & salinity (default: OFF)
!! namcrs coarsened grid (for outputs and/or TOP) (ln_crs =T)
!! namc1d 1D configuration options (ln_c1d =T)
!! namc1d_dyndmp 1D newtonian damping applied on currents (ln_c1d =T)
!! namc1d_uvd 1D data (currents) (ln_c1d =T)
!!======================================================================
!
!-----------------------------------------------------------------------
&namusr_def ! C1D user defined namelist
!-----------------------------------------------------------------------
rn_bathy = 4556. ! depth in meters
/
!-----------------------------------------------------------------------
&namrun ! parameters of the run
!-----------------------------------------------------------------------
cn_exp = "ORCA2" ! experience name
nn_it000 = 1 ! first time step
nn_itend = 16 ! last time step (std 5475)
nn_date0 = 20130101 ! date at nit_0000 (format yyyymmdd) used if ln_rstart=F or (ln_rstart=T and nn_rstctl=0 or 1)
nn_write = 4 ! frequency of write in the output file (modulo referenced to nn_it000)
nn_istate = 0 ! output the initial state (1) or not (0)
ln_mskland = .false. ! mask land points in NetCDF outputs
cn_exp = "BATSPIS" ! experience name
nn_date0 = 20100101 ! date at nit_0000 (format yyyymmdd) used if ln_rstart=F or (ln_rstart=T and nn_rstctl=0 or 1)
nn_it000 = 1 ! first time step
nn_itend = 26280 ! last time step (std 5475)
nn_stock = 87600 ! frequency of creation of a restart file (modulo referenced to 1)
nn_istate = 0 ! output the initial state (1) or not (0)
ln_top = .true. ! Consider (T) or bypass (F) the TOP routines when the key_top is activated
/
!-----------------------------------------------------------------------
&namdom ! time and space domain
!-----------------------------------------------------------------------
rn_Dt = 5400. ! time step for the dynamics and tracer
rn_Dt = 3600. ! time step for the dynamics and tracer
!
ln_c1d = .true. ! Single column domain (1x1pt) (T => fill namc1d)
/
!-----------------------------------------------------------------------
&namusr_def ! GYRE user defined namelist
!-----------------------------------------------------------------------
rn_bathy = 4556. ! depth in meters
/
!-----------------------------------------------------------------------
&namcfg ! parameters of the configuration (default: use namusr_def in namelist_cfg)
!-----------------------------------------------------------------------
ln_read_cfg = .true. ! (=T) read the domain configuration file
cn_domcfg = "ORCA_R2_zps_domcfg" ! domain configuration filename
!
ln_closea = .false. ! F => suppress closed seas (defined by closea_mask field)
! ! from the bathymetry at runtime.
/
!-----------------------------------------------------------------------
&namtile ! parameters of the tiling
......@@ -50,14 +54,38 @@
!-----------------------------------------------------------------------
! ! =T read T-S fields for:
ln_tsd_init = .true. ! ocean initialisation
ln_tsd_dmp = .true. ! T-S restoring (see namtra_dmp)
cn_dir = './' ! root directory for the T-S data location
cn_dir = './BATS/' ! root directory for the T-S data location
!___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________!
! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename !
sn_tem = 'InitTS_l75_BATS' , -1. ,'temp', .false. , .true., 'yearly' , '' , '' , ''
sn_sal = 'InitTS_l75_BATS' , -1. ,'salt', .false. , .true., 'yearly' , '' , '' , ''
/
!-----------------------------------------------------------------------
&namc1d ! 1D configuration options ("key_c1d" default: PAPA station)
!-----------------------------------------------------------------------
rn_lat1d = 31.5 ! Column latitude
rn_lon1d = -64. ! Column longitude
/
!-----------------------------------------------------------------------
&namc1d_dyndmp ! U & V newtonian damping ("key_c1d" default: OFF)
!-----------------------------------------------------------------------
ln_dyndmp = .false. ! add a damping term (T) or not (F)
/
!-----------------------------------------------------------------------
&namc1d_uvd ! data: U & V currents ("key_c1d" default: OFF)
!-----------------------------------------------------------------------
! ! =T read U-V fields for:
ln_uvd_init = .false. ! ocean initialisation
ln_uvd_dyndmp = .false. ! U-V restoring
cn_dir = './BATS' ! root directory for the U-V data location
!___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________!
! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename !
sn_tem = 'data_1m_potential_temperature_nomask', -1. ,'votemper', .true. , .true. , 'yearly' , '' , '' , ''
sn_sal = 'data_1m_salinity_nomask' , -1. ,'vosaline', .true. , .true. , 'yearly' , '' , '' , ''
sn_ucur = 'ucurrent' , -1. ,'u_current', .false. , .true. , 'monthly' , '' , 'Ume' , ''
sn_vcur = 'vcurrent' , -1. ,'v_current', .false. , .true. , 'monthly' , '' , 'Vme' , ''
/
!!======================================================================
!! *** Surface Boundary Condition namelists *** !!
......@@ -82,67 +110,32 @@
&namsbc ! Surface Boundary Condition manager (default: NO selection)
!-----------------------------------------------------------------------
nn_fsbc = 1 ! frequency of SBC module call
! (also = the frequency of sea-ice & iceberg model call)
! Type of air-sea fluxes
ln_blk = .false. ! Bulk formulation (T => fill namsbc_blk )
ln_abl = .true. ! ABL formulation (T => fill namsbc_abl )
! Sea-ice :
nn_ice = 2 ! =0 no ice boundary condition
! ! =1 use observed ice-cover ( => fill namsbc_iif )
! ! =2 or 3 for SI3 and CICE, respectively
! Misc. options of sbc :
ln_blk = .true. ! user defined formulation (T => check usrdef_sbc)
ln_traqsr = .true. ! Light penetration in the ocean (T => fill namtra_qsr)
ln_ssr = .true. ! Sea Surface Restoring on T and/or S (T => fill namsbc_ssr)
ln_dm2dc = .true. ! daily mean to diurnal cycle on short wave
ln_rnf = .true. ! runoffs (T => fill namsbc_rnf)
nn_fwb = 2 ! FreshWater Budget:
! ! =2 annual global mean of e-p-r set to zero
ln_wave = .false. ! Activate coupling with wave (T => fill namsbc_wave)
ln_cdgw = .false. ! Neutral drag coefficient read from wave model (T => ln_wave=.true. & fill namsbc_wave)
ln_sdw = .false. ! Read 2D Surf Stokes Drift & Computation of 3D stokes drift (T => ln_wave=.true. & fill namsbc_wave)
nn_sdrift = 0 ! Parameterization for the calculation of 3D-Stokes drift from the surface Stokes drift
! ! = 0 Breivik 2015 parameterization: v_z=v_0*[exp(2*k*z)/(1-8*k*z)]
! ! = 1 Phillips: v_z=v_o*[exp(2*k*z)-beta*sqrt(-2*k*pi*z)*erfc(sqrt(-2*k*z))]
! ! = 2 Phillips as (1) but using the wave frequency from a wave model
ln_tauwoc = .false. ! Activate ocean stress modified by external wave induced stress (T => ln_wave=.true. & fill namsbc_wave)
ln_tauw = .false. ! Activate ocean stress components from wave model
ln_stcor = .false. ! Activate Stokes Coriolis term (T => ln_wave=.true. & ln_sdw=.true. & fill namsbc_wave)
/
!-----------------------------------------------------------------------
&namsbc_blk ! namsbc_blk generic Bulk formula (ln_blk =T)
!-----------------------------------------------------------------------
! ! bulk algorithm :
ln_NCAR = .true. ! "NCAR" algorithm (Large and Yeager 2008)
!
cn_dir = './' ! root directory for the bulk data location
ln_NCAR = .true. ! "NCAR" algorithm (Large and Yeager 2008)
cn_dir = './BATS/' ! root directory for the bulk data location
!___________!_________________________!___________________!___________!_____________!________!___________!______________________________________!__________!_______________!
! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename !
sn_wndi = 'uwnd_drwnlnd_ERAI_L25Z10_GLOBAL_F128R_ana1d', 24., 'uwnd' , .false. , .false. , 'monthly' , 'weights_ERAI3D_F128_2_ORCA2_bicubic' , 'U10' , ''
sn_wndj = 'vwnd_drwnlnd_ERAI_L25Z10_GLOBAL_F128R_ana1d', 24., 'vwnd' , .false. , .false. , 'monthly' , 'weights_ERAI3D_F128_2_ORCA2_bicubic' , 'V10' , ''
sn_tair = 'tair_drwnlnd_ERAI_L25Z10_GLOBAL_F128R_ana1d', 24., 'tair' , .false. , .false. , 'monthly' , 'weights_ERAI3D_F128_2_ORCA2_bilinear' , '' , ''
sn_humi = 'humi_drwnlnd_ERAI_L25Z10_GLOBAL_F128R_ana1d', 24., 'humi' , .false. , .false. , 'monthly' , 'weights_ERAI3D_F128_2_ORCA2_bilinear' , '' , ''
sn_qsr = 'ncar_rad.15JUNE2009_fill' , 24., 'SWDN_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , ''
sn_qlw = 'ncar_rad.15JUNE2009_fill' , 24., 'LWDN_MOD', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , ''
sn_prec = 'ncar_precip.15JUNE2009_fill' , -1., 'PRC_MOD1', .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , ''
sn_snow = 'ncar_precip.15JUNE2009_fill' , -1., 'SNOW' , .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , ''
sn_slp = 'slp.15JUNE2009_fill' , 6., 'SLP' , .false. , .true. , 'yearly' , 'weights_core_orca2_bilinear_noc.nc' , '' , ''
sn_hpgi = 'uhpg_drwnlnd_ERAI_L25Z10_GLOBAL_F128R_ana1d', 24., 'uhpg' , .false. , .false. , 'monthly' , 'weights_ERAI3D_F128_2_ORCA2_bicubic' , 'UG' , ''
sn_hpgj = 'vhpg_drwnlnd_ERAI_L25Z10_GLOBAL_F128R_ana1d', 24., 'vhpg' , .false. , .false. , 'monthly' , 'weights_ERAI3D_F128_2_ORCA2_bicubic' , 'VG' , ''
sn_wndi = 'CORE2_NY_Forcings_6h_BATS.nc', 6. , 'U_10_MOD', .false. , .true. , 'yearly' , '' , '' , ''
sn_wndj = 'CORE2_NY_Forcings_6h_BATS.nc', 6. , 'V_10_MOD', .false. , .true. , 'yearly' , '' , '' , ''
sn_qsr = 'CORE2_NY_Forcings_1d_BATS.nc', 24. , 'SWDN_MOD', .false. , .true. , 'yearly' , '' , '' , ''
sn_qlw = 'CORE2_NY_Forcings_1d_BATS.nc', 24. , 'LWDN_MOD', .false. , .true. , 'yearly' , '' , '' , ''
sn_tair = 'CORE2_NY_Forcings_6h_BATS.nc', 6. , 'T_10_MOD', .false. , .true. , 'yearly' , '' , '' , ''
sn_humi = 'CORE2_NY_Forcings_6h_BATS.nc', 6. , 'Q_10_MOD', .false. , .true. , 'yearly' , '' , '' , ''
sn_prec = 'CORE2_NY_Forcings_1m_BATS.nc', -1. , 'PRC_MOD1', .false. , .true. , 'yearly' , '' , '' , ''
sn_snow = 'CORE2_NY_Forcings_1m_BATS.nc', -1. , 'SNOW' , .false. , .true. , 'yearly' , '' , '' , ''
sn_slp = 'CORE2_NY_Forcings_6h_BATS.nc', 6. , 'SLP' , .false. , .true. , 'yearly' , '' , '' , ''
/
!-----------------------------------------------------------------------
&namsbc_abl ! Atmospheric Boundary Layer formulation (ln_abl = T)
!-----------------------------------------------------------------------
cn_dir = './' ! root directory for the location of the ABL grid file
cn_dom = 'dom_cfg_abl_L25Z10.nc'
ln_hpgls_frc = .true.
ln_geos_winds = .false.
nn_dyn_restore = 1
rn_ldyn_min = 7.5 ! magnitude of the nudging on ABL dynamics at the bottom of the ABL [hour]
rn_ldyn_max = 1.5 ! magnitude of the nudging on ABL dynamics at the top of the ABL [hour]
rn_ltra_min = 7.5 ! magnitude of the nudging on ABL tracers at the bottom of the ABL [hour]
rn_ltra_max = 1.5 ! magnitude of the nudging on ABL tracers at the top of the ABL [hour]
/
!-----------------------------------------------------------------------
&namtra_qsr ! penetrative solar radiation (ln_traqsr =T)
......@@ -152,37 +145,19 @@
!
nn_chldta = 1 ! RGB : Chl data (=1) or cst value (=0)
cn_dir = './' ! root directory for the chlorophyl data location
cn_dir = './BATS/' ! root directory for the chlorophyl data location
!___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________!
! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename !
sn_chl ='chlorophyll' , -1. , 'CHLA' , .true. , .true. , 'yearly' , '' , '' , ''
sn_chl ='CHLA_BATS' , -1. , 'CHLA' , .true. , .true. , 'yearly' , '' , '' , ''
/
!-----------------------------------------------------------------------
&namsbc_ssr ! surface boundary condition : sea surface restoring (ln_ssr =T)
!-----------------------------------------------------------------------
nn_sssr = 2 ! add a damping term to the surface freshwater flux
rn_deds = -166.67 ! magnitude of the damping on salinity [mm/day]
ln_sssr_bnd = .true. ! flag to bound erp term (associated with nn_sssr=2)
rn_sssr_bnd = 4.e0 ! ABS(Max/Min) value of the damping erp term [mm/day]
/
!-----------------------------------------------------------------------
&namsbc_rnf ! runoffs (ln_rnf =T)
!-----------------------------------------------------------------------
ln_rnf_mouth = .true. ! specific treatment at rivers mouths
rn_hrnf = 15.e0 ! depth over which enhanced vertical mixing is used (ln_rnf_mouth=T)
rn_avt_rnf = 1.e-3 ! value of the additional vertical mixing coef. [m2/s] (ln_rnf_mouth=T)
rn_rfact = 1.e0 ! multiplicative factor for runoff
cn_dir = './' ! root directory for the location of the runoff files
!___________!_____________!___________________!___________!_____________!_________!___________!__________!__________!_______________!
! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
sn_rnf = 'runoff_core_monthly', -1. , 'sorunoff', .true. , .true. , 'yearly' , '' , '' , ''
sn_cnf = 'runoff_core_monthly', 0. , 'socoefr0', .false. , .true. , 'yearly' , '' , '' , ''
sn_s_rnf = 'runoffs' , 24. , 'rosaline', .true. , .true. , 'yearly' , '' , '' , ''
sn_t_rnf = 'runoffs' , 24. , 'rotemper', .true. , .true. , 'yearly' , '' , '' , ''
sn_dep_rnf = 'runoffs' , 0. , 'rodepth' , .false. , .true. , 'yearly' , '' , '' , ''
/
!-----------------------------------------------------------------------
&namsbc_wave ! External fields from wave model (ln_wave=T)
......@@ -206,15 +181,11 @@
!-----------------------------------------------------------------------
&namlbc ! lateral momentum boundary condition (default: NO selection)
!-----------------------------------------------------------------------
rn_shlat = 2. ! no slip
rn_shlat = 0. ! no slip
/
!-----------------------------------------------------------------------
&namagrif ! AGRIF zoom ("key_agrif")
!-----------------------------------------------------------------------
ln_spc_dyn = .true. ! use 0 as special value for dynamics
rn_sponge_tra = 2880. ! coefficient for tracer sponge layer [m2/s]
rn_sponge_dyn = 2880. ! coefficient for dynamics sponge layer [m2/s]
ln_chk_bathy = .false. ! =T check the parent bathymetry
/
!!======================================================================
!! *** Top/Bottom boundary condition *** !!
......@@ -229,28 +200,15 @@
!-----------------------------------------------------------------------
&namdrg ! top/bottom drag coefficient (default: NO selection)
!-----------------------------------------------------------------------
ln_lin = .true. ! linear drag: Cd = Cd0 Uc0
ln_non_lin = .true. ! linear drag: Cd = Cd0 Uc0
/
!-----------------------------------------------------------------------
&nambbc ! bottom temperature boundary condition (default: OFF)
!-----------------------------------------------------------------------
ln_trabbc = .true. ! Apply a geothermal heating at the ocean bottom
nn_geoflx = 2 ! geothermal heat flux: = 2 read variable flux [mW/m2]
cn_dir = './' ! root directory for the geothermal data location
!___________!_________________________!___________________!___________!_____________!________!___________!__________________!__________!_______________!
! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename !
sn_qgh ='geothermal_heating.nc' , -12. , 'heatflow', .false. , .true. , 'yearly' , '' , '' , ''
/
!-----------------------------------------------------------------------
&nambbl ! bottom boundary layer scheme (default: OFF)
!-----------------------------------------------------------------------
ln_trabbl = .true. ! Bottom Boundary Layer parameterisation flag
nn_bbl_ldf = 1 ! diffusive bbl (=1) or not (=0)
nn_bbl_adv = 0 ! advective bbl (=1/2) or not (=0)
rn_ahtbbl = 1000. ! lateral mixing coefficient in the bbl [m2/s]
rn_gambbl = 10. ! advective bbl coefficient [s]
/
!!======================================================================
!! Tracer (T-S) namelists !!
......@@ -266,50 +224,29 @@
!-----------------------------------------------------------------------
&nameos ! ocean Equation Of Seawater (default: NO selection)
!-----------------------------------------------------------------------
ln_eos80 = .true. ! = Use EOS80
ln_teos10 = .true. ! = Use TEOS10
/
!-----------------------------------------------------------------------
&namtra_adv ! advection scheme for tracer (default: NO selection)
!-----------------------------------------------------------------------
ln_traadv_fct = .true. ! FCT scheme
nn_fct_h = 2 ! =2/4, horizontal 2nd / 4th order
nn_fct_v = 2 ! =2/4, vertical 2nd / COMPACT 4th order
ln_traadv_OFF = .true. ! linear dynamics (no momentum advection)
/
!-----------------------------------------------------------------------
&namtra_ldf ! lateral diffusion scheme for tracers (default: NO selection)
!-----------------------------------------------------------------------
ln_traldf_lap = .true. ! laplacian operator
ln_traldf_iso = .true. ! iso-neutral (Standard operator)
ln_traldf_msc = .true. ! Method of Stabilizing Correction (both operators)
! ! Coefficients:
nn_aht_ijk_t = 20 ! space/time variation of eddy coef
! ! = 20 aht = 1/2 Ud. max(e1,e2)
rn_Ud = 0.018 ! lateral diffusive velocity [m/s] (nn_aht_ijk_t= 0, 10, 20, 30)
rn_Ld = 200.e+3 ! lateral diffusive length [m] (nn_aht_ijk_t= 0, 10)
ln_traldf_OFF = .true. ! No explicit diffusion
/
!-----------------------------------------------------------------------
&namtra_mle ! mixed layer eddy parametrisation (Fox-Kemper) (default: OFF)
!-----------------------------------------------------------------------
ln_mle = .true. ! (T) use the Mixed Layer Eddy (MLE) parameterisation
/
!-----------------------------------------------------------------------
&namtra_eiv ! eddy induced velocity param. (default: OFF)
!-----------------------------------------------------------------------
ln_ldfeiv = .true. ! use eddy induced velocity parameterization
! ! Coefficients:
nn_aei_ijk_t = 21 ! space/time variation of the eiv coeficient
! ! = 21 F(i,j,t) =Treguier et al. JPO 1997 formulation
! ! time invariant coefficients: aei0 = 1/2 Ue*Le
rn_Ue = 0.03 ! lateral diffusive velocity [m/s] (nn_aht_ijk_t= 0, 10, 20, 30)
rn_Le = 200.e+3 ! lateral diffusive length [m] (nn_aht_ijk_t= 0, 10)
!
ln_ldfeiv_dia =.true. ! diagnose eiv stream function and velocities
/
!-----------------------------------------------------------------------
&namtra_dmp ! tracer: T & S newtonian damping (default: OFF)
!-----------------------------------------------------------------------
ln_tradmp = .true. ! add a damping term (using resto.nc coef.)
nn_zdmp = 0 ! vertical shape =0 damping throughout the water column
/
!!======================================================================
!! *** Dynamics namelists *** !!
......@@ -326,14 +263,12 @@
!-----------------------------------------------------------------------
&namdyn_adv ! formulation of the momentum advection (default: NO selection)
!-----------------------------------------------------------------------
ln_dynadv_vec = .true. ! vector form - 2nd centered scheme
nn_dynkeg = 0 ! grad(KE) scheme: =0 C2 ; =1 Hollingsworth correction
ln_dynadv_OFF = .true. ! linear dynamics (no momentum advection)
/
!-----------------------------------------------------------------------
&namdyn_vor ! Vorticity / Coriolis scheme (default: NO selection)
!-----------------------------------------------------------------------
ln_dynvor_een = .true. ! energy & enstrophy scheme
nn_een_e3f = 0 ! =0 e3f = mean masked e3t divided by 4
ln_dynvor_ene = .true. ! energy & enstrophy scheme
/
!-----------------------------------------------------------------------
&namdyn_hpg ! Hydrostatic pressure gradient option (default: NO selection)
......@@ -343,14 +278,11 @@
!-----------------------------------------------------------------------
&namdyn_spg ! surface pressure gradient (default: NO selection)
!-----------------------------------------------------------------------
ln_dynspg_ts = .true. ! split-explicit free surface
/
!-----------------------------------------------------------------------
&namdyn_ldf ! lateral diffusion on momentum (default: NO selection)
!-----------------------------------------------------------------------
ln_dynldf_lap = .true. ! laplacian operator
ln_dynldf_lev = .true. ! iso-level
nn_ahm_ijk_t = -30 ! =-30 3D coeff. read in eddy_diffusivity_3D.nc
ln_dynldf_OFF = .true. ! No operator (i.e. no explicit diffusion)
/
!!======================================================================
!! vertical physics namelists !!
......@@ -367,52 +299,24 @@
&namzdf ! vertical physics manager (default: NO selection)
!-----------------------------------------------------------------------
ln_zdftke = .true. ! Turbulent Kinetic Energy closure (T => fill namzdf_tke)
ln_zdfevd = .true. ! Enhanced Vertical Diffusion scheme
nn_evdm = 0 ! evd apply on tracer (=0) or on tracer and momentum (=1)
rn_evd = 100. ! evd mixing coefficient [m2/s]
ln_zdfddm = .true. ! double diffusive mixing
rn_avts = 1.e-4 ! maximum avs (vertical mixing on salinity)
rn_hsbfr = 1.6 ! heat/salt buoyancy flux ratio
ln_zdfiwm = .true. ! internal wave-induced mixing (T => fill namzdf_iwm)
! ! Coefficients
rn_avm0 = 1.2e-4 ! vertical eddy viscosity [m2/s] (background Kz if ln_zdfcst=F)
rn_avt0 = 1.2e-5 ! vertical eddy diffusivity [m2/s] (background Kz if ln_zdfcst=F)
nn_avb = 0 ! profile for background avt & avm (=1) or not (=0)
nn_havtb = 1 ! horizontal shape for avtb (=1) or not (=0)
/
!-----------------------------------------------------------------------
&namzdf_tke ! turbulent eddy kinetic dependent vertical diffusion (ln_zdftke =T)
!-----------------------------------------------------------------------
nn_mxl = 3 ! mixing length: = 0 bounded by the distance to surface and bottom
! ! = 1 bounded by the local vertical scale factor
! ! = 2 first vertical derivative of mixing length bounded by 1
! ! = 3 as =2 with distinct dissipative an mixing length scale
nn_etau = 1 ! penetration of tke below the mixed layer (ML) due to NIWs
! = 0 none ; = 1 add a tke source below the ML
! = 2 add a tke source just at the base of the ML
! = 3 as = 1 applied on HF part of the stress (ln_cpl=T)
rn_eice = 0 ! below sea ice: =0 ON ; =4 OFF when ice fraction > 1/4
/
!-----------------------------------------------------------------------
&namzdf_iwm ! internal wave-driven mixing parameterization (ln_zdfiwm =T)
!-----------------------------------------------------------------------
nn_zpyc = 2 ! pycnocline-intensified dissipation scales as N (=1) or N^2 (=2)
ln_mevar = .true. ! variable (T) or constant (F) mixing efficiency
ln_tsdiff = .true. ! account for differential T/S mixing (T) or not (F)
/
!!======================================================================
!! *** Diagnostics namelists *** !!
!! !!
!! namtrd dynamics and/or tracer trends (default: OFF)
!! namhsb Heat and salt budgets (default: OFF)
!! namdiu Cool skin and warm layer models (default: OFF)
!! namdiu Cool skin and warm layer models (default: OFF)
!! namflo float parameters (default: OFF)
!! nam_diaharm Harmonic analysis of tidal constituents (default: OFF)
!! nam_diadct transports through some sections (default: OFF)
!! nam_diatmb Top Middle Bottom Output (default: OFF)
!! nam_dia25h 25h Mean Output (default: OFF)
!! namnc4 netcdf4 chunking and compression settings ("key_netcdf4")
!! namnc4 netcdf4 chunking and compression settings
!!======================================================================
!
!!======================================================================
......
tests/DIA_GPU/EXPREF/namelist_pisces_cfg → cfgs/C1D/EXP_PISCES_BATS/namelist_pisces_cfg
View file @ 572d155d
......@@ -5,6 +5,7 @@
!-----------------------------------------------------------------------
&nampisext ! air-sea exchange
!-----------------------------------------------------------------------
atcco2 = 280. ! Constant value atmospheric pCO2 - ln_co2int = F
/
!-----------------------------------------------------------------------
&nampisatm ! Atmospheric prrssure
......@@ -13,10 +14,17 @@
!-----------------------------------------------------------------------
&nampisbio ! biological parameters
!-----------------------------------------------------------------------
nrdttrc = 1 ! time step frequency for biology
wsbio = 2. ! POC sinking speed
wsbio2 = 50. ! Big particles sinking speed
/
!-----------------------------------------------------------------------
&namp4zlim ! parameters for nutrient limitations for PISCES std - ln_p4z
!-----------------------------------------------------------------------
concnno3 = 1.e-6 ! Nitrate half saturation of nanophytoplankton
concdno3 = 3.E-6 ! Nitrate half saturation for diatoms
concnnh4 = 1.E-6 ! NH4 half saturation for phyto
concdnh4 = 3.E-6 ! NH4 half saturation for diatoms
/
!-----------------------------------------------------------------------
&namp5zlim ! parameters for nutrient limitations PISCES QUOTA - ln_p5z
......@@ -29,10 +37,18 @@
!-----------------------------------------------------------------------
&nampisopt ! parameters for optics
!-----------------------------------------------------------------------
sn_par = 'par_fr_gewex_clim_BATS.nc' , 24. , 'fr_par' , .true. , .true. , 'yearly' , '' , '' , ''
cn_dir = './BATS/' ! root directory for the location of the dynamical files
ln_varpar = .true. ! boolean for PAR variable
parlux = 0.43 ! Fraction of shortwave as PAR
/
!-----------------------------------------------------------------------
&namp4zprod ! parameters for phytoplankton growth for PISCES std - ln_p4z
!-----------------------------------------------------------------------
pislopen = 2.0 ! P-I slope
pisloped = 2.0 ! P-I slope for diatoms
fecnm = 60E-6 ! Maximum Fe/C in nanophytoplankton
fecdm = 60E-6 ! Maximum Fe/C in diatoms
/
!-----------------------------------------------------------------------
&namp5zprod ! parameters for phytoplankton growth for PISCES quota- ln_p5z
......@@ -49,6 +65,7 @@
!-----------------------------------------------------------------------
&namp4zmes ! parameters for mesozooplankton for PISCES std - ln_p4z
!-----------------------------------------------------------------------
grazrat2 = 0.5 ! maximal mesozoo grazing rate
/
!-----------------------------------------------------------------------
&namp5zmes ! parameters for mesozooplankton
......@@ -57,6 +74,7 @@
!-----------------------------------------------------------------------
&namp4zzoo ! parameters for microzooplankton for PISCES std - ln_p4z
!-----------------------------------------------------------------------
grazrat = 2.0 ! maximal zoo grazing rate
/
!-----------------------------------------------------------------------
&namp5zzoo ! parameters for microzooplankton
......@@ -65,6 +83,7 @@
!-----------------------------------------------------------------------
&nampisfer ! parameters for iron chemistry
!-----------------------------------------------------------------------
xlam1 = 0.02 ! scavenging rate of Iron by biogenic particles
/
!-----------------------------------------------------------------------
&nampisrem ! parameters for remineralization
......@@ -81,10 +100,13 @@
!-----------------------------------------------------------------------
&nampisbc ! parameters for inputs deposition
!-----------------------------------------------------------------------
sn_dust = 'dust.orca.new' , -1 , 'dust' , .true. , .true. , 'yearly' , '' , '' , ''
ln_ironsed = .true. ! boolean for Fe input from sediments
ln_ironice = .true. ! boolean for Fe input from sea ice
ln_hydrofe = .true. ! boolean for from hydrothermal vents
! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
sn_dust = 'DustNew_BATS' , -1 , 'dust' , .true. , .true. , 'yearly' , '' , '' , ''
sn_ironsed = 'pmarge_etopo_BATS', -12. , 'bathy' , .false. , .true. , 'yearly' , '' , '' , ''
!
cn_dir = './BATS/' ! root directory for the location of the dynamical files
ln_ironsed = .true. ! boolean for Fe input from sediments
/
!-----------------------------------------------------------------------
&nampissed ! parameters for sediments mobilization
......@@ -101,7 +123,7 @@
!-----------------------------------------------------------------------
&nampisdmp ! Damping
!-----------------------------------------------------------------------
nn_pisdmp = 5840 ! Frequency of Relaxation
ln_pisdmp = .false. ! Relaxation for some tracers to a mean value
/
!-----------------------------------------------------------------------
&nampismass ! Mass conservation
......
cfgs/C1D/EXP_PISCES_BATS/namelist_pisces_ref 0 → 120000
View file @ 572d155d
../../SHARED/namelist_pisces_ref
\ No newline at end of file
cfgs/C1D/EXP_PISCES_BATS/namelist_ref 0 → 120000
View file @ 572d155d
../../SHARED/namelist_ref
\ No newline at end of file
cfgs/C1D/EXP_PISCES_BATS/namelist_top_cfg 0 → 100644
View file @ 572d155d
!!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
!! NEMO/TOP1 : Configuration namelist : used to overwrite defaults values defined in SHARED/namelist_top_ref
!>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
!-----------------------------------------------------------------------
&namtrc_run ! run information
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namtrc ! tracers definition
!-----------------------------------------------------------------------
jp_bgc = 24
!
ln_pisces = .true.
ln_my_trc = .false.
ln_age = .false.
ln_cfc11 = .false.
ln_cfc12 = .false.
ln_c14 = .false.
!
ln_trcdta = .true. ! Initialisation from data input file (T) or not (F)
ln_trcbc = .true. ! Enables Boundary conditions
! ! ! ! ! !
! ! name ! title of the field ! units ! init ! sbc ! cbc ! obc ! ais
sn_tracer(1) = 'DIC ' , 'Dissolved inorganic Concentration ', 'mol-C/L' , .true. , .false., .false. , .false. , .false.
sn_tracer(2) = 'Alkalini' , 'Total Alkalinity Concentration ', 'eq/L ' , .true. , .false., .false. , .false. , .false.
sn_tracer(3) = 'O2 ' , 'Dissolved Oxygen Concentration ', 'mol-C/L' , .true. , .false., .false., .false. , .false.
sn_tracer(4) = 'CaCO3 ' , 'Calcite Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(5) = 'PO4 ' , 'Phosphate Concentration ', 'mol-C/L' , .true. , .true. , .false. , .false. , .false.
sn_tracer(6) = 'POC ' , 'Small organic carbon Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(7) = 'Si ' , 'Silicate Concentration ', 'mol-C/L' , .true. , .true. , .false. , .false. , .false.
sn_tracer(8) = 'PHY ' , 'Nanophytoplankton Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(9) = 'ZOO ' , 'Microzooplankton Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(10) = 'DOC ' , 'Dissolved organic Concentration ', 'mol-C/L' , .true. , .false., .false. , .false. , .false.
sn_tracer(11) = 'PHY2 ' , 'Diatoms Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(12) = 'ZOO2 ' , 'Mesozooplankton Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(13) = 'DSi ' , 'Diatoms Silicate Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(14) = 'Fer ' , 'Dissolved Iron Concentration ', 'mol-C/L' , .true. , .true. , .false. , .false. , .true.
sn_tracer(15) = 'BFe ' , 'Big iron particles Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(16) = 'GOC ' , 'Big organic carbon Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(17) = 'SFe ' , 'Small iron particles Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(18) = 'DFe ' , 'Diatoms iron Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(19) = 'GSi ' , 'Sinking biogenic Silicate Concentration', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(20) = 'NFe ' , 'Nano iron Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(21) = 'NCHL ' , 'Nano chlorophyl Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(22) = 'DCHL ' , 'Diatoms chlorophyl Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
sn_tracer(23) = 'NO3 ' , 'Nitrates Concentration ', 'mol-C/L' , .true. , .true. , .false. , .false. , .false.
sn_tracer(24) = 'NH4 ' , 'Ammonium Concentration ', 'mol-C/L' , .false. , .false., .false., .false. , .false.
/
!-----------------------------------------------------------------------
&namage ! AGE
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namtrc_dta ! Initialisation from data input file
!-----------------------------------------------------------------------
! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
sn_trcdta(1) = 'Glodapv2.1_annual_l75_BATS.nc', -12. , 'TDIC' , .false. , .true. , 'yearly' , '' , '' , ''
sn_trcdta(2) = 'Glodapv2.1_annual_l75_BATS.nc', -12. , 'Alkalini', .false. , .true. , 'yearly' , '' , '' , ''
sn_trcdta(3) = 'WOA2009_monthly_l75_BATS.nc' , -1. , 'O2' , .true. , .true. , 'yearly' , '' , '' , ''
sn_trcdta(5) = 'WOA2009_monthly_l75_BATS.nc' , -1. , 'PO4' , .true. , .true. , 'yearly' , '' , '' , ''
sn_trcdta(7) = 'WOA2009_monthly_l75_BATS.nc' , -1. , 'Si' , .true. , .true. , 'yearly' , '' , '' , ''
sn_trcdta(10) = 'PISCES_monthly_l75_BATS.nc' , -1. , 'DOC' , .true. , .true. , 'yearly' , '' , '' , ''
sn_trcdta(14) = 'PISCES_monthly_l75_BATS.nc' , -1. , 'Fer' , .true. , .true. , 'yearly' , '' , '' , ''
sn_trcdta(23) = 'WOA2009_monthly_l75_BATS.nc' , -1. , 'NO3' , .true. , .true. , 'yearly' , '' , '' , ''
!
cn_dir = './BATS/' ! root directory for the location of the data files
!
rn_trfac(1) = 1.0e-06 ! multiplicative factor
rn_trfac(2) = 1.0e-06 ! - - - -
rn_trfac(3) = 44.6e-06 ! - - - -
rn_trfac(5) = 117.0e-06 ! - - - -
rn_trfac(7) = 1.0e-06 ! - - - -
rn_trfac(10) = 1.0e-06 ! - - - -
rn_trfac(14) = 1.0e-06 ! - - - -
rn_trfac(23) = 7.3125e-06 ! - - - -
/
!-----------------------------------------------------------------------
&namtrc_adv ! advection scheme for passive tracer (default: NO selection)
!-----------------------------------------------------------------------
ln_trcadv_OFF = .true. ! No advection
/
!-----------------------------------------------------------------------
&namtrc_ldf ! lateral diffusion scheme for passive tracer (default: NO selection)
!-----------------------------------------------------------------------
ln_trcldf_OFF = .true. ! No lateral diffusion
/
!-----------------------------------------------------------------------
&namtrc_rad ! treatment of negative concentrations
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namtrc_snk ! sedimentation of particles
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namtrc_opt ! light availability in the water column
!-----------------------------------------------------------------------
! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
!-----------------------------------------------------------------------
&namtrc_dmp ! passive tracer newtonian damping
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namtrc_ice ! Representation of sea ice growth & melt effects
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namtrc_trd ! diagnostics on tracer trends ('key_trdtrc')
!----------------------------------------------------------------------
/
!----------------------------------------------------------------------
&namtrc_bc ! data for boundary conditions
!-----------------------------------------------------------------------
! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !
! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !
sn_trcsbc(5) = 'DustNew_BATS' , -1 , 'dustpo4' , .true. , .true. , 'yearly' , '' , '' , ''
sn_trcsbc(7) = 'DustNew_BATS' , -1 , 'dustsi' , .true. , .true. , 'yearly' , '' , '' , ''
sn_trcsbc(14) = 'DustNew_BATS' , -1 , 'dustfer' , .true. , .true. , 'yearly' , '' , '' , ''
sn_trcsbc(23) = 'Ndep_BATS' , -12 , 'ndep2' , .false. , .true. , 'yearly' , '' , '' , ''
rn_trsfac(5) = 3.774194e-03 ! ( 1E-3 / 31. * 117 )
rn_trsfac(7) = 9.572954e-03 ! ( 0.269 / 28.1 )
rn_trsfac(14) = 6.2667860e-04 ! ( 0.035 / 55.85 )
rn_trsfac(23) = 5.2232143e-01 ! ( From kgN m-2 s-1 to molC l-1 ====> zfact = 7.3125/14 )
rn_sbc_time = 1. ! Time scaling factor for SBC and CBC data (seconds in a day)
/
!----------------------------------------------------------------------
&namtrc_bdy ! Setup of tracer boundary conditions
!-----------------------------------------------------------------------
/
!-----------------------------------------------------------------------
&namtrc_ais ! Representation of Antarctic Ice Sheet tracers supply
!-----------------------------------------------------------------------
/
cfgs/C1D/EXP_PISCES_BATS/namelist_top_ref 0 → 120000
View file @ 572d155d
../../SHARED/namelist_top_ref
\ No newline at end of file
cfgs/C1D/EXP_PISCES_BATS/namelist_trc_ref 0 → 120000
View file @ 572d155d
../../SHARED/namelist_trc_ref
\ No newline at end of file
cfgs/C1D/EXP_SASICE/axis_def_nemo.xml 0 → 120000
View file @ 572d155d
../../SHARED/axis_def_nemo.xml
\ No newline at end of file
cfgs/C1D/EXP_SASICE/context_nemo.xml 0 → 100644
View file @ 572d155d
<!--
==============================================================================================
NEMO context
==============================================================================================
-->
<context id="nemo">
<variable_definition>
<!-- Year/Month/Day of time origin for NetCDF files; defaults to 1800-01-01 -->
<variable id="ref_year" type="int"> 1900 </variable>
<variable id="ref_month" type="int"> 01 </variable>
<variable id="ref_day" type="int"> 01 </variable>
<variable id="rho0" type="float" > 1026.0 </variable>
<variable id="cpocean" type="float" > 3991.86795711963 </variable>
<variable id="convSpsu" type="float" > 0.99530670233846 </variable>
<variable id="rhoic" type="float" > 917.0 </variable>
<variable id="rhosn" type="float" > 330.0 </variable>
<variable id="missval" type="float" > 1.e20 </variable>
</variable_definition>
<!-- Fields definition -->
<field_definition src="./field_def_nemo-oce.xml"/> <!-- NEMO ocean dynamics -->
<field_definition src="./field_def_nemo-ice.xml"/> <!-- NEMO sea-ice model -->
<!-- Files definition -->
<file_definition src="./file_def_nemo-oce.xml"/> <!-- NEMO ocean dynamics -->
<file_definition src="./file_def_nemo-ice.xml"/> <!-- NEMO sea-ice model -->
<!-- Axis definition -->
<axis_definition src="./axis_def_nemo.xml"/>
<!-- Domain definition -->
<domain_definition src="./domain_def_nemo.xml"/>
<!-- Grids definition -->
<grid_definition src="./grid_def_nemo.xml"/>
</context>
cfgs/C1D/EXP_SASICE/domain_def_nemo.xml 0 → 120000
View file @ 572d155d
../../SHARED/domain_def_nemo.xml
\ No newline at end of file
cfgs/C1D/EXP_SASICE/field_def_nemo-ice.xml 0 → 120000
View file @ 572d155d
../../SHARED/field_def_nemo-ice.xml
\ No newline at end of file
cfgs/C1D/EXP_SASICE/field_def_nemo-oce.xml 0 → 120000
View file @ 572d155d
../../SHARED/field_def_nemo-oce.xml
\ No newline at end of file
tests/DIA_GPU/EXPREF/file_def_nemo-ice.xml → cfgs/C1D/EXP_SASICE/file_def_nemo-ice.xml
View file @ 572d155d
......@@ -11,8 +11,8 @@
<file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="1mo" min_digits="4">
<file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE."> <!-- 5d files -->
<file id="file21" name_suffix="_icemod" description="ice variables" enabled=".true." >
<file_group id="ice_5d" output_freq="5d" output_level="10" enabled=".TRUE."> <!-- 5d files -->
<file id="file101" name_suffix="_icemod" description="ice variables" enabled=".true." >
<!-- ice mask -->
<field field_ref="icemask" name="simsk" />
......@@ -89,7 +89,7 @@
</file>
<file id="file22" name_suffix="_SBC_scalar" description="scalar variables" enabled=".true." >
<file id="file102" name_suffix="_SBC_scalar" description="scalar variables" enabled=".true." >
<!-- global contents -->
<field field_ref="ibgvol_tot" name="ibgvol_tot" />
<field field_ref="sbgvol_tot" name="sbgvol_tot" />
......@@ -116,17 +116,17 @@
</file_group>
<file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files -->
<file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="ice_1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="ice_1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files -->
<file_group id="ice_2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="ice_3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="ice_4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="ice_6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files -->
<file_group id="ice_1m" output_freq="1mo" output_level="10" enabled=".TRUE."> <!-- real monthly files -->
<!-- To compute transport through straits : need to read ice mask at ice iteration at freq_offset = 1mo - nn_fsbc
<file id="file23" name_suffix="_strait_ice" description="transport variables through straits" >
<file id="file103" name_suffix="_strait_ice" description="transport variables through straits" >
<field field_ref="strait_mifl" name="simassacrossline" freq_offset="1mo-4ts" />
<field field_ref="strait_msfl" name="snmassacrossline" freq_offset="1mo-4ts" />
<field field_ref="strait_arfl" name="siareaacrossline" freq_offset="1mo-4ts" />
......@@ -135,14 +135,14 @@
</file_group>
<file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
<file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
<file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
<file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
<file_group id="1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files -->
<file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
<file_group id="ice_2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->
<file_group id="ice_3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->
<file_group id="ice_4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->
<file_group id="ice_6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->
<file_group id="ice_1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files -->
<file_group id="ice_2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="ice_5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="ice_10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
<!-- To compute transport through straits : need to read ice mask at ice iteration at freq_offset = - nn_fsbc + 1
<file id="maskMFO" name="maskMFO" enabled="true" mode="read" output_freq="1mo" cyclic="true" >
......
tests/STATION_ASF/EXPREF/file_def_nemo-oce.xml → cfgs/C1D/EXP_SASICE/file_def_nemo-oce.xml
View file @ 572d155d
......@@ -3,7 +3,7 @@
<file_definition type="one_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="1mo" min_digits="4">
<file_group id="1h" output_freq="1h" output_level="10" enabled=".TRUE."> <!-- 1h files -->
<file_group id="oce_1h" output_freq="1h" output_level="10" enabled=".TRUE."> <!-- 1h files -->
<file id="file1" name_suffix="_gridT" description="ocean T grid variables" compression_level="3" >
<field field_ref="t_skin" name="t_skin" />
......@@ -46,17 +46,17 @@
</file_group>
<file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="1d" output_freq="1d" output_level="10" enabled=".TRUE."/> <!-- 1d files -->
<file_group id="3d" output_freq="3d" output_level="10" enabled=".TRUE."/> <!-- 3d files -->
<file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE."/> <!-- 5d files -->
<file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->
<file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
<file_group id="oce_1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->
<file_group id="oce_2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->
<file_group id="oce_3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->
<file_group id="oce_4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->
<file_group id="oce_6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->
<file_group id="oce_1d" output_freq="1d" output_level="10" enabled=".TRUE."/> <!-- 1d files -->
<file_group id="oce_3d" output_freq="3d" output_level="10" enabled=".TRUE."/> <!-- 3d files -->
<file_group id="oce_5d" output_freq="5d" output_level="10" enabled=".TRUE."/> <!-- 5d files -->
<file_group id="oce_1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->
<file_group id="oce_2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->
<file_group id="oce_5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->
<file_group id="oce_10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->
</file_definition>