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MODULE obs_profiles_def
!!=====================================================================
!! *** MODULE obs_profiles_def ***
!! Observation diagnostics: Storage handling for T,S profiles
!! arrays and additional flags etc.
!! This module only defines the data type and
!! operations on the data type. There is no
!! actual data in the module.
!!=====================================================================
!!----------------------------------------------------------------------
!! obs_prof : F90 type containing the profile information
!! obs_prof_var : F90 type containing the variable definition
!! obs_prof_valid : F90 type containing the valid obs. definition
!! obs_prof_alloc : Allocates profile arrays
!! obs_prof_dealloc : Deallocates profile arrays
!! obs_prof_compress : Extract sub-information from a obs_prof type
!! to a new obs_prof type
!! obs_prof_decompress : Reinsert sub-information from a obs_prof type
!! into the original obs_prof type
!! obs_prof_staend : Set npvsta and npvend of a variable within an
!! obs_prof_var type
!!----------------------------------------------------------------------
!! * Modules used
USE par_kind, ONLY : & ! Precision variables
& wp
USE in_out_manager ! I/O manager
USE obs_mpp, ONLY : & ! MPP tools
obs_mpp_sum_integers
USE obs_fbm ! Obs feedback format
USE lib_mpp, ONLY : &
& ctl_warn, ctl_stop
IMPLICIT NONE
!! * Routine/type accessibility
PRIVATE
PUBLIC &
& obs_prof, &
& obs_prof_var, &
& obs_prof_valid, &
& obs_prof_alloc, &
& obs_prof_alloc_var, &
& obs_prof_dealloc, &
& obs_prof_compress, &
& obs_prof_decompress,&
& obs_prof_staend
!! * Type definition for valid observations
TYPE obs_prof_valid
LOGICAL, POINTER, DIMENSION(:) :: luse
END TYPE obs_prof_valid
!! * Type definition for each variable
TYPE obs_prof_var
! Arrays with size equal to the number of observations
INTEGER, POINTER, DIMENSION(:) :: &
& mvk, & !: k-th grid coord. for interpolating to profile data
& nvpidx,& !: Profile number
& nvlidx,& !: Level number in profile
& nvqc, & !: Variable QC flags
& idqc !: Depth QC flag
REAL(KIND=wp), POINTER, DIMENSION(:) :: &
& vdep, & !: Depth coordinate of profile data
& vobs, & !: Profile data
& vmod !: Model counterpart of the profile data vector
REAL(KIND=wp), POINTER, DIMENSION(:,:) :: &
& vext !: Extra variables
INTEGER, POINTER, DIMENSION(:) :: &
& nvind !: Source indices of temp. data in compressed data
! Arrays with size equal to idefnqcf times the number of observations
INTEGER, POINTER, DIMENSION(:,:) :: &
& idqcf, & !: Depth QC flags
& nvqcf !: Variable QC flags
END TYPE obs_prof_var
!! * Type definition for profile observation type
TYPE obs_prof
! Bookkeeping
INTEGER :: nvar !: Number of variables
INTEGER :: next !: Number of extra fields
INTEGER :: nprof !: Total number of profiles within window.
INTEGER :: nstp !: Number of time steps
INTEGER :: npi !: Number of 3D grid points
INTEGER :: npj
INTEGER :: npk
INTEGER :: nprofup !: Observation counter used in obs_oper
! Bookkeeping arrays with sizes equal to number of variables
CHARACTER(len=8), POINTER, DIMENSION(:) :: &
& cvars !: Variable names
INTEGER, POINTER, DIMENSION(:) :: &
& nvprot, & !: Local total number of profile T data
& nvprotmpp !: Global total number of profile T data
! Arrays with size equal to the number of profiles
INTEGER, POINTER, DIMENSION(:) :: &
& npidx,& !: Profile number
& npfil,& !: Profile number in file
& nyea, & !: Year of profile
& nmon, & !: Month of profile
& nday, & !: Day of profile
& nhou, & !: Hour of profile
& nmin, & !: Minute of profile
& mstp, & !: Time step nearest to profile
& nqc, & !: Profile QC
& ntyp, & !: Type of profile product (WMO table 1770)
& ipqc, & !: Position QC
& itqc !: Time QC
REAL(KIND=wp), POINTER, DIMENSION(:) :: &
& rlam, & !: Longitude coordinate of profile data
& rphi !: Latitude coordinate of profile data
CHARACTER(LEN=8), POINTER, DIMENSION(:) :: &
& cwmo !: Profile WMO indentifier
! Arrays with size equal to the number of profiles times
! number of variables
INTEGER, POINTER, DIMENSION(:,:) :: &
& npvsta, & !: Start of each variable profile in full arrays
& npvend, & !: End of each variable profile in full arrays
& mi, & !: i-th grid coord. for interpolating to profile T data
& mj, & !: j-th grid coord. for interpolating to profile T data
& ivqc !: QC flags for all levels for a variable
! Arrays with size equal to idefnqcf
! the number of profiles times number of variables
INTEGER, POINTER, DIMENSION(:,:) :: &
& nqcf, & !: Observation QC flags
& ipqcf, & !: Position QC flags
& itqcf !: Time QC flags
! Arrays with size equal to idefnqcf
! the number of profiles times number of variables
INTEGER, POINTER, DIMENSION(:,:,:) :: &
& ivqcf
! Arrays of variables
TYPE(obs_prof_var), POINTER, DIMENSION(:) :: var
! Arrays with size equal to the number of time steps in the window
INTEGER, POINTER, DIMENSION(:) :: &
& npstp, & !: Total number of profiles
& npstpmpp !: Total number of profiles
! Arrays with size equal to the number of time steps in the window times
! number of variables
INTEGER, POINTER, DIMENSION(:,:) :: &
& nvstp, & !: Local total num. of profile data each time step
& nvstpmpp !: Global total num. of profile data each time step
! Arrays with size equal to the number of grid points times number of
! variables
REAL(KIND=wp), POINTER, DIMENSION(:,:,:,:) :: &
& vdmean !: Daily averaged model field
! Arrays used to store source indices when
! compressing obs_prof derived types
! Array with size nprof
INTEGER, POINTER, DIMENSION(:) :: &
& npind !: Source indices of profile data in compressed data
END TYPE obs_prof
!!----------------------------------------------------------------------
!! NEMO/OCE 4.0 , NEMO Consortium (2018)
!! $Id: obs_profiles_def.F90 10068 2018-08-28 14:09:04Z nicolasmartin $
!! Software governed by the CeCILL license (see ./LICENSE)
!!----------------------------------------------------------------------
CONTAINS
SUBROUTINE obs_prof_alloc( prof, kvar, kext, kprof, &
& ko3dt, kstp, kpi, kpj, kpk )
!!----------------------------------------------------------------------
!! *** ROUTINE obs_prof_alloc ***
!!
!! ** Purpose : - Allocate data for profile arrays
!!
!! ** Method : - Fortran-90 dynamic arrays
!!
!! History :
!! ! 07-01 (K. Mogensen) Original code
!! ! 07-03 (K. Mogensen) Generalized profiles
!!----------------------------------------------------------------------
!! * Arguments
TYPE(obs_prof), INTENT(INOUT) :: prof ! Profile data to be allocated
INTEGER, INTENT(IN) :: kprof ! Number of profiles
INTEGER, INTENT(IN) :: kvar ! Number of variables
INTEGER, INTENT(IN) :: kext ! Number of extra fields within each variable
INTEGER, INTENT(IN), DIMENSION(kvar) :: &
& ko3dt ! Number of observations per variables
INTEGER, INTENT(IN) :: kstp ! Number of time steps
INTEGER, INTENT(IN) :: kpi ! Number of 3D grid points
INTEGER, INTENT(IN) :: kpj
INTEGER, INTENT(IN) :: kpk
!!* Local variables
INTEGER :: jvar
INTEGER :: ji
! Set bookkeeping variables
prof%nvar = kvar
prof%next = kext
prof%nprof = kprof
prof%nstp = kstp
prof%npi = kpi
prof%npj = kpj
prof%npk = kpk
! Allocate arrays of size number of variables
ALLOCATE( &
& prof%cvars(kvar), &
& prof%nvprot(kvar), &
& prof%nvprotmpp(kvar) &
)
DO jvar = 1, kvar
prof%cvars (jvar) = "NotSet"
prof%nvprot (jvar) = ko3dt(jvar)
prof%nvprotmpp(jvar) = 0
END DO
! Allocate arrays of size number of profiles
! times number of variables
ALLOCATE( &
& prof%npvsta(kprof,kvar), &
& prof%npvend(kprof,kvar), &
& prof%mi(kprof,kvar), &
& prof%mj(kprof,kvar), &
& prof%ivqc(kprof,kvar) &
)
! Allocate arrays of size iqcfdef times number of profiles
! times number of variables
ALLOCATE( &
& prof%ivqcf(idefnqcf,kprof,kvar) &
& )
! Allocate arrays of size number of profiles
ALLOCATE( &
& prof%npidx(kprof), &
& prof%npfil(kprof), &
& prof%nyea(kprof), &
& prof%nmon(kprof), &
& prof%nday(kprof), &
& prof%nhou(kprof), &
& prof%nmin(kprof), &
& prof%mstp(kprof), &
& prof%nqc(kprof), &
& prof%ipqc(kprof), &
& prof%itqc(kprof), &
& prof%ntyp(kprof), &
& prof%rlam(kprof), &
& prof%rphi(kprof), &
& prof%cwmo(kprof), &
& prof%npind(kprof) &
& )
! Allocate arrays of size idefnqcf times number of profiles
ALLOCATE( &
& prof%nqcf(idefnqcf,kprof), &
& prof%ipqcf(idefnqcf,kprof), &
& prof%itqcf(idefnqcf,kprof) &
& )
! Allocate obs_prof_var type
ALLOCATE( &
& prof%var(kvar) &
& )
! For each variables allocate arrays of size number of observations
DO jvar = 1, kvar
IF ( ko3dt(jvar) >= 0 ) THEN
CALL obs_prof_alloc_var( prof, jvar, kext, ko3dt(jvar) )
ENDIF
END DO
! Allocate arrays of size number of time step size
ALLOCATE( &
& prof%npstp(kstp), &
& prof%npstpmpp(kstp) &
& )
! Allocate arrays of size number of time step size times
! number of variables
ALLOCATE( &
& prof%nvstp(kstp,kvar), &
& prof%nvstpmpp(kstp,kvar) &
& )
! Allocate arrays of size number of grid points size times
! number of variables
ALLOCATE( &
& prof%vdmean(kpi,kpj,kpk,kvar) &
& )
! Set defaults for compression indices
DO ji = 1, kprof
prof%npind(ji) = ji
END DO
DO jvar = 1, kvar
DO ji = 1, ko3dt(jvar)
prof%var(jvar)%nvind(ji) = ji
END DO
END DO
! Set defaults for number of observations per time step
prof%npstp(:) = 0
prof%npstpmpp(:) = 0
prof%nvstp(:,:) = 0
prof%nvstpmpp(:,:) = 0
! Set the observation counter used in obs_oper
prof%nprofup = 0
END SUBROUTINE obs_prof_alloc
SUBROUTINE obs_prof_dealloc( prof )
!!----------------------------------------------------------------------
!! *** ROUTINE obs_prof_dealloc ***
!!
!! ** Purpose : - Deallocate data for profile arrays
!!
!! ** Method : - Fortran-90 dynamic arrays
!!
!! History :
!! ! 07-01 (K. Mogensen) Original code
!!----------------------------------------------------------------------
!! * Arguments
TYPE(obs_prof), INTENT(INOUT) :: &
& prof ! Profile data to be deallocated
!!* Local variables
INTEGER :: &
& jvar
! Deallocate arrays of size number of profiles
! times number of variables
DEALLOCATE( &
& prof%npvsta, &
& prof%npvend &
)
! Dellocate arrays of size number of profiles size
DEALLOCATE( &
& prof%mi, &
& prof%mj, &
& prof%ivqc, &
& prof%ivqcf, &
& prof%npidx, &
& prof%npfil, &
& prof%nyea, &
& prof%nmon, &
& prof%nday, &
& prof%nhou, &
& prof%nmin, &
& prof%mstp, &
& prof%nqc, &
& prof%ipqc, &
& prof%itqc, &
& prof%nqcf, &
& prof%ipqcf, &
& prof%itqcf, &
& prof%ntyp, &
& prof%rlam, &
& prof%rphi, &
& prof%cwmo, &
& prof%npind &
& )
! For each variables allocate arrays of size number of observations
DO jvar = 1, prof%nvar
IF ( prof%nvprot(jvar) >= 0 ) THEN
CALL obs_prof_dealloc_var( prof, jvar )
ENDIF
END DO
! Dellocate obs_prof_var type
DEALLOCATE( &
& prof%var &
& )
! Deallocate arrays of size number of time step size
DEALLOCATE( &
& prof%npstp, &
& prof%npstpmpp &
& )
! Deallocate arrays of size number of time step size times
! number of variables
DEALLOCATE( &
& prof%nvstp, &
& prof%nvstpmpp &
& )
! Deallocate arrays of size number of grid points size times
! number of variables
DEALLOCATE( &
& prof%vdmean &
& )
! Dellocate arrays of size number of variables
DEALLOCATE( &
& prof%cvars, &
& prof%nvprot, &
& prof%nvprotmpp &
)
END SUBROUTINE obs_prof_dealloc
SUBROUTINE obs_prof_alloc_var( prof, kvar, kext, kobs )
!!----------------------------------------------------------------------
!! *** ROUTINE obs_prof_alloc_var ***
!!
!! ** Purpose : - Allocate data for variable data in profile arrays
!!
!! ** Method : - Fortran-90 dynamic arrays
!!
!! History :
!! ! 07-03 (K. Mogensen) Original code
!! * Arguments
TYPE(obs_prof), INTENT(INOUT) :: prof ! Profile data to be allocated
INTEGER, INTENT(IN) :: kvar ! Variable number
INTEGER, INTENT(IN) :: kext ! Number of extra fields within each variable
INTEGER, INTENT(IN) :: kobs ! Number of observations
ALLOCATE( &
& prof%var(kvar)%mvk(kobs), &
& prof%var(kvar)%nvpidx(kobs), &
& prof%var(kvar)%nvlidx(kobs), &
& prof%var(kvar)%nvqc(kobs), &
& prof%var(kvar)%idqc(kobs), &
& prof%var(kvar)%vdep(kobs), &
& prof%var(kvar)%vobs(kobs), &
& prof%var(kvar)%vmod(kobs), &
& prof%var(kvar)%nvind(kobs) &
& )
ALLOCATE( &
& prof%var(kvar)%idqcf(idefnqcf,kobs), &
& prof%var(kvar)%nvqcf(idefnqcf,kobs) &
& )
IF (kext>0) THEN
ALLOCATE( &
& prof%var(kvar)%vext(kobs,kext) &
& )
ENDIF
END SUBROUTINE obs_prof_alloc_var
SUBROUTINE obs_prof_dealloc_var( prof, kvar )
!!----------------------------------------------------------------------
!! *** ROUTINE obs_prof_alloc_var ***
!!
!! ** Purpose : - Allocate data for variable data in profile arrays
!!
!! ** Method : - Fortran-90 dynamic arrays
!!
!! History :
!! ! 07-03 (K. Mogensen) Original code
!! * Arguments
TYPE(obs_prof), INTENT(INOUT) :: prof ! Profile data to be allocated
INTEGER, INTENT(IN) :: kvar ! Variable number
DEALLOCATE( &
& prof%var(kvar)%mvk, &
& prof%var(kvar)%nvpidx, &
& prof%var(kvar)%nvlidx, &
& prof%var(kvar)%nvqc, &
& prof%var(kvar)%idqc, &
& prof%var(kvar)%vdep, &
& prof%var(kvar)%vobs, &
& prof%var(kvar)%vmod, &
& prof%var(kvar)%nvind, &
& prof%var(kvar)%idqcf, &
& prof%var(kvar)%nvqcf &
& )
IF (prof%next>0) THEN
DEALLOCATE( &
& prof%var(kvar)%vext &
& )
ENDIF
END SUBROUTINE obs_prof_dealloc_var
SUBROUTINE obs_prof_compress( prof, newprof, lallocate, &
& kumout, lvalid, lvvalid )
!!----------------------------------------------------------------------
!! *** ROUTINE obs_prof_compress ***
!!
!! ** Purpose : - Extract sub-information from a obs_prof type
!! into a new obs_prof type
!!
!! ** Method : - The data is copied from prof to new prof.
!! In the case of lvalid and lvvalid both being
!! present only the selected data will be copied.
!! If lallocate is true the data in the newprof is
!! allocated either with the same number of elements
!! as prof or with only the subset of elements defined
!! by the optional selection in lvalid and lvvalid
!!
!! History :
!! ! 07-01 (K. Mogensen) Original code
!!----------------------------------------------------------------------
!! * Arguments
TYPE(obs_prof), INTENT(IN) :: prof ! Original profile
TYPE(obs_prof), INTENT(INOUT) :: newprof ! New profile with the copy of the data
LOGICAL :: lallocate ! Allocate newprof data
INTEGER,INTENT(IN) :: kumout ! Fortran unit for messages
TYPE(obs_prof_valid), OPTIONAL, INTENT(in) :: &
& lvalid ! Valid profiles
TYPE(obs_prof_valid), OPTIONAL, INTENT(in), DIMENSION(prof%nvar) :: &
& lvvalid ! Valid data within the profiles
!!* Local variables
INTEGER :: inprof
INTEGER, DIMENSION(prof%nvar) :: &
& invpro
INTEGER :: jvar
INTEGER :: jext
INTEGER :: ji
INTEGER :: jj
LOGICAL :: lfirst
TYPE(obs_prof_valid) :: &
& llvalid
TYPE(obs_prof_valid), DIMENSION(prof%nvar) :: &
& llvvalid
LOGICAL :: lallpresent
LOGICAL :: lnonepresent
! Check that either all or none of the masks are persent.
lallpresent = .FALSE.
lnonepresent = .FALSE.
IF ( PRESENT(lvalid) .AND. PRESENT(lvvalid) ) THEN
lallpresent = .TRUE.
ELSEIF ( ( .NOT. PRESENT(lvalid) ) .AND. &
& ( .NOT. PRESENT(lvvalid) ) ) THEN
lnonepresent = .TRUE.
ELSE
CALL ctl_stop('Error in obs_prof_compress:', &
& 'Either all selection variables should be set', &
& 'or no selection variable should be set' )
ENDIF
! Count how many elements there should be in the new data structure
IF ( lallpresent ) THEN
inprof = 0
invpro(:) = 0
DO ji = 1, prof%nprof
IF ( lvalid%luse(ji) ) THEN
inprof=inprof+1
DO jvar = 1, prof%nvar
DO jj = prof%npvsta(ji,jvar), prof%npvend(ji,jvar)
IF ( lvvalid(jvar)%luse(jj) ) &
& invpro(jvar) = invpro(jvar) +1
END DO
END DO
ENDIF
END DO
ELSE
inprof = prof%nprof
invpro(:) = prof%nvprot(:)
ENDIF
! Optionally allocate data in the new data structure
IF ( lallocate ) THEN
CALL obs_prof_alloc( newprof, prof%nvar, &
& prof%next, &
& inprof, invpro, &
& prof%nstp, prof%npi, &
& prof%npj, prof%npk )
ENDIF
! Allocate temporary mask array to unify the code for both cases
ALLOCATE( llvalid%luse(prof%nprof) )
DO jvar = 1, prof%nvar
ALLOCATE( llvvalid(jvar)%luse(prof%nvprot(jvar)) )
END DO
IF ( lallpresent ) THEN
llvalid%luse(:) = lvalid%luse(:)
DO jvar = 1, prof%nvar
llvvalid(jvar)%luse(:) = lvvalid(jvar)%luse(:)
END DO
ELSE
llvalid%luse(:) = .TRUE.
DO jvar = 1, prof%nvar
llvvalid(jvar)%luse(:) = .TRUE.
END DO
ENDIF
! Setup bookkeeping variables
inprof = 0
invpro(:) = 0
newprof%npvsta(:,:) = 0
newprof%npvend(:,:) = -1
! Loop over source profiles
DO ji = 1, prof%nprof
IF ( llvalid%luse(ji) ) THEN
! Copy the header information
inprof = inprof + 1
newprof%mi(inprof,:) = prof%mi(ji,:)
newprof%mj(inprof,:) = prof%mj(ji,:)
newprof%npidx(inprof) = prof%npidx(ji)
newprof%npfil(inprof) = prof%npfil(ji)
newprof%nyea(inprof) = prof%nyea(ji)
newprof%nmon(inprof) = prof%nmon(ji)
newprof%nday(inprof) = prof%nday(ji)
newprof%nhou(inprof) = prof%nhou(ji)
newprof%nmin(inprof) = prof%nmin(ji)
newprof%mstp(inprof) = prof%mstp(ji)
newprof%nqc(inprof) = prof%nqc(ji)
newprof%ipqc(inprof) = prof%ipqc(ji)
newprof%itqc(inprof) = prof%itqc(ji)
newprof%ivqc(inprof,:)= prof%ivqc(ji,:)
newprof%ntyp(inprof) = prof%ntyp(ji)
newprof%rlam(inprof) = prof%rlam(ji)
newprof%rphi(inprof) = prof%rphi(ji)
newprof%cwmo(inprof) = prof%cwmo(ji)
! QC info
newprof%nqcf(:,inprof) = prof%nqcf(:,ji)
newprof%ipqcf(:,inprof) = prof%ipqcf(:,ji)
newprof%itqcf(:,inprof) = prof%itqcf(:,ji)
newprof%ivqcf(:,inprof,:) = prof%ivqcf(:,ji,:)
! npind is the index of the original profile
newprof%npind(inprof) = ji
! Copy the variable information
DO jvar = 1, prof%nvar
lfirst = .TRUE.
DO jj = prof%npvsta(ji,jvar), prof%npvend(ji,jvar)
IF ( llvvalid(jvar)%luse(jj) ) THEN
invpro(jvar) = invpro(jvar) + 1
! Book keeping information
IF ( lfirst ) THEN
lfirst = .FALSE.
newprof%npvsta(inprof,jvar) = invpro(jvar)
ENDIF
newprof%npvend(inprof,jvar) = invpro(jvar)
! Variable data
newprof%var(jvar)%mvk(invpro(jvar)) = &
& prof%var(jvar)%mvk(jj)
newprof%var(jvar)%nvpidx(invpro(jvar)) = &
& prof%var(jvar)%nvpidx(jj)
newprof%var(jvar)%nvlidx(invpro(jvar)) = &
& prof%var(jvar)%nvlidx(jj)
newprof%var(jvar)%nvqc(invpro(jvar)) = &
& prof%var(jvar)%nvqc(jj)
newprof%var(jvar)%idqc(invpro(jvar)) = &
& prof%var(jvar)%idqc(jj)
newprof%var(jvar)%idqcf(:,invpro(jvar))= &
& prof%var(jvar)%idqcf(:,jj)
newprof%var(jvar)%nvqcf(:,invpro(jvar))= &
& prof%var(jvar)%nvqcf(:,jj)
newprof%var(jvar)%vdep(invpro(jvar)) = &
& prof%var(jvar)%vdep(jj)
newprof%var(jvar)%vobs(invpro(jvar)) = &
& prof%var(jvar)%vobs(jj)
newprof%var(jvar)%vmod(invpro(jvar)) = &
& prof%var(jvar)%vmod(jj)
DO jext = 1, prof%next
newprof%var(jvar)%vext(invpro(jvar),jext) = &
& prof%var(jvar)%vext(jj,jext)
END DO
! nvind is the index of the original variable data
newprof%var(jvar)%nvind(invpro(jvar)) = jj
ENDIF
END DO
END DO
ENDIF
END DO
! Update MPP counters
DO jvar = 1, prof%nvar
newprof%nvprot(jvar) = invpro(jvar)
END DO
CALL obs_mpp_sum_integers ( newprof%nvprot, newprof%nvprotmpp,&
& prof%nvar )
! Set book keeping variables which do not depend on number of obs.
newprof%nvar = prof%nvar
newprof%next = prof%next
newprof%nstp = prof%nstp
newprof%npi = prof%npi
newprof%npj = prof%npj
newprof%npk = prof%npk
newprof%cvars(:) = prof%cvars(:)
! Deallocate temporary data
DO jvar = 1, prof%nvar
DEALLOCATE( llvvalid(jvar)%luse )
END DO
DEALLOCATE( llvalid%luse )
END SUBROUTINE obs_prof_compress
SUBROUTINE obs_prof_decompress( prof, oldprof, ldeallocate, kumout )
!!----------------------------------------------------------------------
!! *** ROUTINE obs_prof_decompress ***
!!
!! ** Purpose : - Copy back information to original profile type
!!
!! ** Method : - Reinsert updated information from a previous
!! copied/compressed profile type into the original
!! profile data and optionally deallocate the prof
!! data input
!!
!! History :
!! ! 07-01 (K. Mogensen) Original code
!!----------------------------------------------------------------------
!! * Arguments
TYPE(obs_prof),INTENT(INOUT) :: prof ! Updated profile data
TYPE(obs_prof),INTENT(INOUT) :: oldprof ! Original profile data
LOGICAL :: ldeallocate ! Deallocate the updated data of insertion
INTEGER,INTENT(in) :: kumout ! Output unit
!!* Local variables
INTEGER :: jvar
INTEGER :: jext
INTEGER :: ji
INTEGER :: jj
INTEGER :: jk
INTEGER :: jl
DO ji = 1, prof%nprof
! Copy header information
jk = prof%npind(ji)
oldprof%mi(jk,:) = prof%mi(ji,:)
oldprof%mj(jk,:) = prof%mj(ji,:)
oldprof%npidx(jk) = prof%npidx(ji)
oldprof%npfil(jk) = prof%npfil(ji)
oldprof%nyea(jk) = prof%nyea(ji)
oldprof%nmon(jk) = prof%nmon(ji)
oldprof%nday(jk) = prof%nday(ji)
oldprof%nhou(jk) = prof%nhou(ji)
oldprof%nmin(jk) = prof%nmin(ji)
oldprof%mstp(jk) = prof%mstp(ji)
oldprof%nqc(jk) = prof%nqc(ji)
oldprof%ipqc(jk) = prof%ipqc(ji)
oldprof%itqc(jk) = prof%itqc(ji)
oldprof%ivqc(jk,:)= prof%ivqc(ji,:)
oldprof%ntyp(jk) = prof%ntyp(ji)
oldprof%rlam(jk) = prof%rlam(ji)
oldprof%rphi(jk) = prof%rphi(ji)
oldprof%cwmo(jk) = prof%cwmo(ji)
! QC info
oldprof%nqcf(:,jk) = prof%nqcf(:,ji)
oldprof%ipqcf(:,jk) = prof%ipqcf(:,ji)
oldprof%itqcf(:,jk) = prof%itqcf(:,ji)
oldprof%ivqcf(:,jk,:) = prof%ivqcf(:,ji,:)
! Copy the variable information
DO jvar = 1, prof%nvar
DO jj = prof%npvsta(ji,jvar), prof%npvend(ji,jvar)
jl = prof%var(jvar)%nvind(jj)
oldprof%var(jvar)%mvk(jl) = prof%var(jvar)%mvk(jj)
oldprof%var(jvar)%nvpidx(jl) = prof%var(jvar)%nvpidx(jj)
oldprof%var(jvar)%nvlidx(jl) = prof%var(jvar)%nvlidx(jj)
oldprof%var(jvar)%nvqc(jl) = prof%var(jvar)%nvqc(jj)
oldprof%var(jvar)%idqc(jl) = prof%var(jvar)%idqc(jj)
oldprof%var(jvar)%vdep(jl) = prof%var(jvar)%vdep(jj)
oldprof%var(jvar)%vobs(jl) = prof%var(jvar)%vobs(jj)
oldprof%var(jvar)%vmod(jl) = prof%var(jvar)%vmod(jj)
oldprof%var(jvar)%idqcf(:,jl) = prof%var(jvar)%idqcf(:,jj)
oldprof%var(jvar)%nvqcf(:,jl) = prof%var(jvar)%nvqcf(:,jj)
DO jext = 1, prof%next
oldprof%var(jvar)%vext(jl,jext) = &
& prof%var(jvar)%vext(jj,jext)
END DO
END DO
END DO
END DO
! Optionally deallocate the updated profile data
IF ( ldeallocate ) CALL obs_prof_dealloc( prof )
END SUBROUTINE obs_prof_decompress
SUBROUTINE obs_prof_staend( prof, kvarno )
!!----------------------------------------------------------------------
!! *** ROUTINE obs_prof_decompress ***
!!
!! ** Purpose : - Set npvsta and npvend of a variable within
!! an obs_prof_var type
!!
!! ** Method : - Find the start and stop of a profile by searching
!! through the data
!!
!! History :
!! ! 07-04 (K. Mogensen) Original code
!!----------------------------------------------------------------------
!! * Arguments
TYPE(obs_prof),INTENT(INOUT) :: prof ! Profile data
INTEGER,INTENT(IN) :: kvarno ! Variable number
!!* Local variables
INTEGER :: ji
INTEGER :: iprofno
!-----------------------------------------------------------------------
! Compute start and end bookkeeping arrays
!-----------------------------------------------------------------------
prof%npvsta(:,kvarno) = prof%nvprot(kvarno) + 1
prof%npvend(:,kvarno) = -1
DO ji = 1, prof%nvprot(kvarno)
iprofno = prof%var(kvarno)%nvpidx(ji)
prof%npvsta(iprofno,kvarno) = &
& MIN( ji, prof%npvsta(iprofno,kvarno) )
prof%npvend(iprofno,kvarno) = &
& MAX( ji, prof%npvend(iprofno,kvarno) )
END DO
DO ji = 1, prof%nprof
IF ( prof%npvsta(ji,kvarno) == ( prof%nvprot(kvarno) + 1 ) ) &
& prof%npvsta(ji,kvarno) = 0
END DO
END SUBROUTINE obs_prof_staend
END MODULE obs_profiles_def