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cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
cd ${SETTE_DIR}
export TEST_NAME="REPRO_8_4"
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
JOB_FILE=${EXE_DIR}/run_job.sh
NPROC=32
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"SAS_84\"
set_namelist namelist_cfg nn_it000 1
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg jpni 8
set_namelist namelist_cfg jpnj 4
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
fi
# --------------
# ORCA2_ICE_OBS
# --------------
## Test assimilation interface code, OBS and ASM for reproducibility
## Restartability not tested (ASM code not restartable while increments are being applied)
if [ ${config} == "ORCA2_ICE_OBS" ] ; then
SETTE_CONFIG="ORCA2_ICE_OBS"${SETTE_STG}
## Reproducibility tests
Guillaume Samson
committed
if [[ -n "${NEMO_DEBUG}" || ${CMP_NAM,,} =~ ("debug"|"dbg") ]]
then
ITEND=16 # 1 day
else
ITEND=80 # 5 days
fi
cd ${MAIN_DIR}
#
# syncronisation if target directory/file exist (not done by makenemo)
sync_config ORCA2_ICE_PISCES ${SETTE_CONFIG} 'cfgs'
clean_config ORCA2_ICE_PISCES ${SETTE_CONFIG} 'cfgs'
#
Guillaume Samson
committed
. ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r ORCA2_ICE_PISCES -d "OCE ICE" -t ${CMP_DIR:-${CONFIG_DIR0}} -k 0 ${NEMO_DEBUG} -j ${CMPL_CORES} add_key "key_asminc ${ADD_KEYS}" del_key "key_top ${DEL_KEYS}"
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fi
if [ ${config} == "ORCA2_ICE_OBS" ] && [ ${DO_RESTART} == "1" ] ; then
## Reproducibility tests
export TEST_NAME="REPRO_4_8"
cd ${SETTE_DIR}
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
JOB_FILE=${EXE_DIR}/run_job.sh
NPROC=32
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"O2L3OBS_48\"
set_namelist namelist_cfg nn_it000 1
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg ln_read_cfg .true.
set_namelist namelist_cfg jpni 4
set_namelist namelist_cfg jpnj 8
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
set_namelist namelist_cfg ln_diaobs .true.
set_namelist namelist_cfg ln_t3d .true.
set_namelist namelist_cfg ln_s3d .true.
set_namelist namelist_cfg ln_sst .true.
set_namelist namelist_cfg ln_sla .true.
set_namelist namelist_cfg ln_sic .true.
set_namelist namelist_cfg ln_vel3d .true.
set_namelist namelist_cfg ln_bkgwri .true.
set_namelist namelist_cfg ln_trainc .true.
set_namelist namelist_cfg ln_dyninc .true.
set_namelist namelist_cfg ln_sshinc .true.
set_namelist namelist_cfg ln_asmiau .true.
#remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration)
set_namelist namelist_top_cfg ln_trcdta .false.
set_namelist namelist_top_cfg ln_trcbc .false.
# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
# if not you need input files, and for tests is not necessary
set_namelist namelist_pisces_cfg ln_varpar .false.
set_namelist namelist_pisces_cfg ln_ironsed .false.
set_namelist namelist_pisces_cfg ln_ironice .false.
set_namelist namelist_pisces_cfg ln_hydrofe .false.
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_nnogather ${USING_NOGATHER} .true. .false.
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
cd ${SETTE_DIR}
export TEST_NAME="REPRO_8_4"
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
JOB_FILE=${EXE_DIR}/run_job.sh
NPROC=32
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"O2L3OBS_84\"
set_namelist namelist_cfg nn_it000 1
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg ln_read_cfg .true.
set_namelist namelist_cfg jpni 8
set_namelist namelist_cfg jpnj 4
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
set_namelist namelist_cfg ln_diaobs .true.
set_namelist namelist_cfg ln_t3d .true.
set_namelist namelist_cfg ln_s3d .true.
set_namelist namelist_cfg ln_sst .true.
set_namelist namelist_cfg ln_sla .true.
set_namelist namelist_cfg ln_sic .true.
set_namelist namelist_cfg ln_vel3d .true.
set_namelist namelist_cfg ln_bkgwri .true.
set_namelist namelist_cfg ln_trainc .true.
set_namelist namelist_cfg ln_dyninc .true.
set_namelist namelist_cfg ln_sshinc .true.
set_namelist namelist_cfg ln_asmiau .true.
#remove all useless options for pisces (due to ORCA2_ICE_PISCES reference configuration)
set_namelist namelist_top_cfg ln_trcdta .false.
set_namelist namelist_top_cfg ln_trcbc .false.
# put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
# if not you need input files, and for tests is not necessary
set_namelist namelist_pisces_cfg ln_varpar .false.
set_namelist namelist_pisces_cfg ln_ironsed .false.
set_namelist namelist_pisces_cfg ln_ironice .false.
set_namelist namelist_pisces_cfg ln_hydrofe .false.
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_nnogather ${USING_NOGATHER} .true. .false.
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_ORCA2_ICE_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
fi
# ------------
# AGRIF ICE
# -----------
if [ ${config} == "AGRIF" ] ; then
SETTE_CONFIG="AGRIF_DEMO"${SETTE_STG}
Guillaume Samson
committed
if [[ -n "${NEMO_DEBUG}" || ${CMP_NAM,,} =~ ("debug"|"dbg") ]]
then
ITEND=4 # 6h
else
ITEND=20 # 1d and 6h
fi
ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
ITRST_1=$( printf "%08d" $(( ${ITEND} / 2 )) )
ITRST_2=$( printf "%08d" $(( ${ITEND} * 4 / 2 )) )
ITRST_3=$( printf "%08d" $(( ${ITEND} * 4 * 3 / 2 )) )
cd ${MAIN_DIR}
#
# syncronisation if target directory/file exist (not done by makenemo)
sync_config AGRIF_DEMO ${SETTE_CONFIG} 'cfgs'
clean_config AGRIF_DEMO ${SETTE_CONFIG} 'cfgs'
#
# AGRIF_DEMO does not yet support nn_hls=2 => key_loop_fusion can not be used
# . ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r AGRIF_DEMO -j ${CMPL_CORES} add_key "${ADD_KEYS/key_loop_fusion}" del_key "${DEL_KEYS}"
Guillaume Samson
committed
. ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r AGRIF_DEMO -t ${CMP_DIR:-${CONFIG_DIR0}} -k 0 ${NEMO_DEBUG} -j ${CMPL_CORES} add_key "${ADD_KEYS}" del_key "${DEL_KEYS}"
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fi
if [ ${config} == "AGRIF" ] && [ ${DO_RESTART} == "1" ] ; then
## Restartability tests
export TEST_NAME="LONG"
cd ${SETTE_DIR}
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
JOB_FILE=${EXE_DIR}/run_job.sh
NPROC=16
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"AGRIF_LONG\"
set_namelist namelist_cfg nn_it000 1
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist 1_namelist_cfg cn_exp \"AGRIF_LONG\"
set_namelist 1_namelist_cfg nn_it000 1
set_namelist 1_namelist_cfg nn_itend ${ITEND}
set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} / 2 ))
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist 2_namelist_cfg cn_exp \"AGRIF_LONG\"
set_namelist 2_namelist_cfg nn_it000 1
set_namelist 2_namelist_cfg nn_itend $(( ${ITEND} * 4 ))
set_namelist 2_namelist_cfg nn_stock $(( ${ITEND} * 4 / 2 ))
set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist 3_namelist_cfg cn_exp \"AGRIF_LONG\"
set_namelist 3_namelist_cfg nn_it000 1
set_namelist 3_namelist_cfg nn_itend $(( ${ITEND} * 4 * 3 ))
set_namelist 3_namelist_cfg nn_stock $(( ${ITEND} * 4 * 3 / 2 ))
set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_namelist_opt 2_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 2_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 2_namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_namelist_opt 3_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 3_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 3_namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
export TEST_NAME="SHORT"
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"AGRIF_SHORT\"
set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
set_namelist namelist_cfg ln_rstart .true.
set_namelist namelist_cfg nn_rstctl 2
set_namelist namelist_top_cfg ln_rsttr .true.
set_namelist namelist_top_cfg nn_rsttr 2
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist 1_namelist_cfg cn_exp \"AGRIF_SHORT\"
set_namelist 1_namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
set_namelist 1_namelist_cfg nn_itend ${ITEND}
set_namelist 1_namelist_cfg nn_stock $(( ${ITEND} / 2 ))
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist 1_namelist_cfg ln_rstart .true.
set_namelist 1_namelist_cfg nn_rstctl 2
set_namelist 1_namelist_top_cfg ln_rsttr .true.
set_namelist 1_namelist_cfg ln_init_chfrpar .false.
set_namelist 1_namelist_top_cfg nn_rsttr 2
set_namelist 2_namelist_cfg cn_exp \"AGRIF_SHORT\"
set_namelist 2_namelist_cfg nn_it000 $(( ${ITEND} * 4 / 2 + 1 ))
set_namelist 2_namelist_cfg nn_itend $(( ${ITEND} * 4 ))
set_namelist 2_namelist_cfg nn_stock $(( ${ITEND} * 4 / 2 ))
set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist 2_namelist_cfg ln_rstart .true.
set_namelist 2_namelist_cfg nn_rstctl 2
set_namelist 2_namelist_cfg ln_init_chfrpar .false.
set_namelist 2_namelist_top_cfg ln_rsttr .true.
set_namelist 2_namelist_top_cfg nn_rsttr 2
set_namelist 3_namelist_cfg cn_exp \"AGRIF_SHORT\"
set_namelist 3_namelist_cfg nn_it000 $(( ${ITEND} * 4 * 3 / 2 + 1 ))
set_namelist 3_namelist_cfg nn_itend $(( ${ITEND} * 4 * 3 ))
set_namelist 3_namelist_cfg nn_stock $(( ${ITEND} * 4 * 3 / 2 ))
set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist 3_namelist_cfg ln_rstart .true.
set_namelist 3_namelist_cfg nn_rstctl 2
set_namelist 3_namelist_cfg ln_init_chfrpar .false.
set_namelist 3_namelist_top_cfg ln_rsttr .true.
set_namelist 3_namelist_top_cfg nn_rsttr 2
set_namelist namelist_cfg cn_ocerst_in \"AGRIF_LONG_${ITRST}_restart\"
set_namelist namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_${ITRST}_restart_ice\"
set_namelist namelist_top_cfg cn_trcrst_in \"AGRIF_LONG_${ITRST}_restart_trc\"
set_namelist 1_namelist_cfg cn_ocerst_in \"AGRIF_LONG_${ITRST_1}_restart\"
set_namelist 1_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_${ITRST_1}_restart_ice\"
set_namelist 1_namelist_top_cfg cn_trcrst_in \"AGRIF_LONG_${ITRST_1}_restart_trc\"
set_namelist 2_namelist_cfg cn_ocerst_in \"AGRIF_LONG_${ITRST_2}_restart\"
set_namelist 2_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_${ITRST_2}_restart_ice\"
set_namelist 2_namelist_top_cfg cn_trcrst_in \"AGRIF_LONG_${ITRST_2}_restart_trc\"
set_namelist 3_namelist_cfg cn_ocerst_in \"AGRIF_LONG_${ITRST_3}_restart\"
set_namelist 3_namelist_ice_cfg cn_icerst_in \"AGRIF_LONG_${ITRST_3}_restart_ice\"
set_namelist 3_namelist_top_cfg cn_trcrst_in \"AGRIF_LONG_${ITRST_3}_restart_trc\"
#
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_namelist_opt 2_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 2_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 2_namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_namelist_opt 3_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 3_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 3_namelist_cfg ln_tile ${USING_TILING} .true. .false.
for (( i=1; i<=$NPROC; i++)) ; do
L_NPROC=$(( $i - 1 ))
L_NPROC=`printf "%04d\n" ${L_NPROC}`
ln -sf ../LONG/AGRIF_LONG_${ITRST}_restart_${L_NPROC}.nc .
ln -sf ../LONG/AGRIF_LONG_${ITRST}_restart_ice_${L_NPROC}.nc .
ln -sf ../LONG/AGRIF_LONG_${ITRST}_restart_trc_${L_NPROC}.nc .
ln -sf ../LONG/1_AGRIF_LONG_${ITRST_1}_restart_${L_NPROC}.nc .
ln -sf ../LONG/1_AGRIF_LONG_${ITRST_1}_restart_ice_${L_NPROC}.nc .
ln -sf ../LONG/1_AGRIF_LONG_${ITRST_1}_restart_trc_${L_NPROC}.nc .
ln -sf ../LONG/2_AGRIF_LONG_${ITRST_2}_restart_${L_NPROC}.nc .
ln -sf ../LONG/2_AGRIF_LONG_${ITRST_2}_restart_ice_${L_NPROC}.nc .
ln -sf ../LONG/2_AGRIF_LONG_${ITRST_2}_restart_trc_${L_NPROC}.nc .
ln -sf ../LONG/3_AGRIF_LONG_${ITRST_3}_restart_${L_NPROC}.nc .
ln -sf ../LONG/3_AGRIF_LONG_${ITRST_3}_restart_ice_${L_NPROC}.nc .
ln -sf ../LONG/3_AGRIF_LONG_${ITRST_3}_restart_trc_${L_NPROC}.nc .
done
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
fi
if [ ${config} == "AGRIF" ] && [ ${DO_REPRO} == "1" ] ; then
## Reproducibility tests
export TEST_NAME="REPRO_2_8"
cd ${MAIN_DIR}
cd ${SETTE_DIR}
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
JOB_FILE=${EXE_DIR}/run_job.sh
NPROC=16
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"AGRIF_28\"
set_namelist namelist_cfg nn_it000 1
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg jpni 2
set_namelist namelist_cfg jpnj 8
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist 1_namelist_cfg cn_exp \"AGRIF_28\"
set_namelist 1_namelist_cfg nn_it000 1
set_namelist 1_namelist_cfg nn_itend ${ITEND}
set_namelist 1_namelist_cfg jpni 2
set_namelist 1_namelist_cfg jpnj 8
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_namelist 2_namelist_cfg cn_exp \"AGRIF_28\"
set_namelist 2_namelist_cfg nn_it000 1
set_namelist 2_namelist_cfg nn_itend $(( ${ITEND} * 4 ))
set_namelist 2_namelist_cfg jpni 2
set_namelist 2_namelist_cfg jpnj 8
set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist_opt 2_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 2_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 2_namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_namelist 3_namelist_cfg cn_exp \"AGRIF_28\"
set_namelist 3_namelist_cfg nn_it000 1
set_namelist 3_namelist_cfg nn_itend $(( ${ITEND} * 4 * 3 ))
set_namelist 3_namelist_cfg jpni 2
set_namelist 3_namelist_cfg jpnj 8
set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist_opt 3_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 3_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 3_namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
cd ${SETTE_DIR}
export TEST_NAME="REPRO_4_4"
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
JOB_FILE=${EXE_DIR}/run_job.sh
NPROC=16
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"AGRIF_44\"
set_namelist namelist_cfg nn_it000 1
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg jpni 4
set_namelist namelist_cfg jpnj 4
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_xio_using_server iodef.xml ${USING_MPMD}
set_namelist 1_namelist_cfg cn_exp \"AGRIF_44\"
set_namelist 1_namelist_cfg nn_it000 1
set_namelist 1_namelist_cfg nn_itend ${ITEND}
set_namelist 1_namelist_cfg jpni 4
set_namelist 1_namelist_cfg jpnj 4
set_namelist 1_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist_opt 1_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 1_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 1_namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_namelist 2_namelist_cfg cn_exp \"AGRIF_44\"
set_namelist 2_namelist_cfg nn_it000 1
set_namelist 2_namelist_cfg nn_itend $(( ${ITEND} * 4 ))
set_namelist 2_namelist_cfg jpni 4
set_namelist 2_namelist_cfg jpnj 4
set_namelist 2_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist_opt 2_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 2_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 2_namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_namelist 3_namelist_cfg cn_exp \"AGRIF_44\"
set_namelist 3_namelist_cfg nn_it000 1
set_namelist 3_namelist_cfg nn_itend $(( ${ITEND} * 4 * 3 ))
set_namelist 3_namelist_cfg jpni 4
set_namelist 3_namelist_cfg jpnj 4
set_namelist 3_namelist_cfg sn_cfctl%l_runstat .true.
set_namelist_opt 3_namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt 3_namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt 3_namelist_cfg ln_tile ${USING_TILING} .true. .false.
cd ${SETTE_DIR}
. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
fi
if [ ${config} == "AGRIF" ] && [ ${DO_CORRUPT} == "1" ] ; then
## test code corruption with AGRIF (phase 1) ==> Compile with key_agrif but run with no zoom
Guillaume Samson
committed
if [[ -n "${NEMO_DEBUG}" || ${CMP_NAM,,} =~ ("debug"|"dbg") ]]
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then
ITEND=16 # 1d
else
ITEND=150 # 5d and 9h
fi
export TEST_NAME="ORCA2"
cd ${MAIN_DIR}
cd ${SETTE_DIR}
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
JOB_FILE=${EXE_DIR}/run_job.sh
NPROC=32
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"ORCA2\"
# Use "original" parent grid bathymetry
set_namelist namelist_cfg cn_domcfg "'ORCA_R2_zps_domcfg.nc'"
set_namelist namelist_cfg nn_it000 1
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
# Set the number of fine grids to zero:
sed -i "1s/.*/0/" ${EXE_DIR}/AGRIF_FixedGrids.in
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
fi
## test code corruption with AGRIF (phase 2) ==> Compile without key_agrif (to be compared with AGRIF_DEMO_ST/ORCA2)
if [ ${config} == "AGRIF" ] && [ ${DO_CORRUPT} == "1" ] ; then
SETTE_CONFIG="AGRIF_DEMO_NOAGRIF"${SETTE_STG}
export TEST_NAME="ORCA2"
cd ${MAIN_DIR}
#
# syncronisation if target directory/file exist (not done by makenemo)
sync_config AGRIF_DEMO ${SETTE_CONFIG} 'cfgs'
clean_config AGRIF_DEMO ${SETTE_CONFIG} 'cfgs'
#
# AGRIF_DEMO does not yet support nn_hls=2 => key_loop_fusion can not be used
Guillaume Samson
committed
. ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r AGRIF_DEMO -t ${CMP_DIR:-${CONFIG_DIR0}} -k 0 ${NEMO_DEBUG} -j ${CMPL_CORES} add_key "${ADD_KEYS/key_loop_fusion}" del_key "key_agrif ${DEL_KEYS}"
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cd ${SETTE_DIR}
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
JOB_FILE=${EXE_DIR}/run_job.sh
NPROC=32
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"ORCA2\"
# Use "original" parent grid bathymetry
set_namelist namelist_cfg cn_domcfg "'ORCA_R2_zps_domcfg.nc'"
set_namelist namelist_cfg nn_it000 1
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist namelist_cfg sn_cfctl%l_trcstat .true.
#set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
#
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
fi
# -------
# WED025
# -------
if [ ${config} == "WED025" ] ; then
SETTE_CONFIG="WED025"${SETTE_STG}
Guillaume Samson
committed
if [[ -n "${NEMO_DEBUG}" || ${CMP_NAM,,} =~ ("debug"|"dbg") ]]
then
ITEND=12 # 4h
else
ITEND=720 # 10 days
fi
ITRST=$( printf "%08d" $(( ${ITEND} / 2 )) )
cd ${MAIN_DIR}
#
# syncronisation if target directory/file exist (not done by makenemo)
sync_config WED025 ${SETTE_CONFIG} 'cfgs'
clean_config WED025 ${SETTE_CONFIG} 'cfgs'
#
# WED025 uses ln_hpg_isf so remove key_qco if added by default
Guillaume Samson
committed
. ./makenemo -m ${CMP_NAM} -n ${SETTE_CONFIG} -r WED025 -t ${CMP_DIR:-${CONFIG_DIR0}} -k 0 ${NEMO_DEBUG} -j ${CMPL_CORES} add_key "${ADD_KEYS/key_qco/}" del_key "${DEL_KEYS}"
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fi
if [ ${config} == "WED025" ] && [ ${DO_RESTART} == "1" ] ; then
## Restartability tests
export TEST_NAME="LONG"
cd ${SETTE_DIR}
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
JOB_FILE=${EXE_DIR}/run_job.sh
NPROC=32
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"WED025_LONG\"
set_namelist namelist_cfg nn_it000 1
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
set_namelist namelist_cfg nn_date0 20000115
set_namelist namelist_cfg jpni 4
set_namelist namelist_cfg jpnj 8
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
#set_namelist namelist_ice_cfg ln_icediachk .true.
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_WED025.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
export TEST_NAME="SHORT"
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"WED025_SHORT\"
set_namelist namelist_cfg nn_it000 $(( ${ITEND} / 2 + 1 ))
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg nn_stock $(( ${ITEND} / 2 ))
set_namelist namelist_cfg ln_rstart .true.
set_namelist namelist_cfg nn_rstctl 2
set_namelist namelist_cfg jpni 4
set_namelist namelist_cfg jpnj 8
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist namelist_cfg cn_ocerst_in \"WED025_LONG_${ITRST}_restart\"
set_namelist namelist_ice_cfg cn_icerst_in \"WED025_LONG_${ITRST}_restart_ice\"
for (( i=1; i<=$NPROC; i++)) ; do
L_NPROC=$(( $i - 1 ))
L_NPROC=`printf "%04d\n" ${L_NPROC}`
ln -sf ../LONG/WED025_LONG_${ITRST}_restart_${L_NPROC}.nc .
ln -sf ../LONG/WED025_LONG_${ITRST}_restart_ice_${L_NPROC}.nc .
done
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_WED025.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
fi
if [ ${config} == "WED025" ] && [ ${DO_REPRO} == "1" ] ; then
## Reproducibility tests
export TEST_NAME="REPRO_5_6"
cd ${MAIN_DIR}
cd ${SETTE_DIR}
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
JOB_FILE=${EXE_DIR}/run_job.sh
NPROC=32
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"WED025_56\"
set_namelist namelist_cfg nn_it000 1
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg nn_date0 20000115
set_namelist namelist_cfg jpni 6
set_namelist namelist_cfg jpnj 7
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_WED025.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
cd ${SETTE_DIR}
export TEST_NAME="REPRO_8_4"
. ./prepare_exe_dir.sh
set_valid_dir
clean_valid_dir
JOB_FILE=${EXE_DIR}/run_job.sh
NPROC=32
if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
cd ${EXE_DIR}
set_namelist namelist_cfg cn_exp \"WED025_84\"
set_namelist namelist_cfg nn_it000 1
set_namelist namelist_cfg nn_itend ${ITEND}
set_namelist namelist_cfg nn_date0 20000115
set_namelist namelist_cfg jpni 8
set_namelist namelist_cfg jpnj 4
set_namelist namelist_cfg sn_cfctl%l_runstat .true.
set_namelist_opt namelist_cfg ln_timing ${USING_TIMING} .true. .false.
set_namelist_opt namelist_cfg nn_hls ${USING_EXTRA_HALO} 2 1
set_namelist_opt namelist_cfg nn_comm ${USING_COLLECTIVES} 2 1
set_namelist_opt namelist_cfg ln_tile ${USING_TILING} .true. .false.
set_xio_using_server iodef.xml ${USING_MPMD}
cd ${SETTE_DIR}
. ./prepare_job.sh input_WED025.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS} ${NEMO_VALID}
cd ${SETTE_DIR}
. ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
fi
done
#
# Return to SETTE_DIR (last fcm_job.sh will have moved to EXE_DIR)
cd ${SETTE_DIR}